RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ZNF256Q9Y2P7 627 aaPredicted RBP4.57□□□□□ -1.68
SMARCC1-204ENST00000462198 LY96Q9Y6Y9 160 aa4.57□□□□□ -1.68
SMARCC1-204ENST00000462198 ALMS1Q8TCU4 4167 aa4.57□□□□□ -1.68
SMARCC1-204ENST00000462198 CTXND1A0A1B0GTU2 59 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 A0A1W2PS18 150 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 CA1P00915 261 aaPredicted RBP4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 IGKV1-39P01597 117 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 IGKV1-5P01602 117 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 IGKV1D-39P04432 117 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 OR5AL1P0C617 328 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 P0C879 139 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 EGR2P11161 476 aaPredicted RBP4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 MYOD1P15172 320 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 NPPCP23582 126 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 MYCNOSP40205 109 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 RPL27AP46776 148 aaKnown RBP4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 C9orf66Q5T8R8 295 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 C10orf99Q6UWK7 81 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 TMEM14EPQ6UXP3 125 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 IL17DQ8TAD2 202 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 TM2D3Q9BRN9 247 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 TMEM70Q9BUB7 260 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 VSIRQ9H7M9 311 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 SCRT2Q9NQ03 307 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 IL36BQ9NZH7 164 aa4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 FOXA2Q9Y261 457 aaPredicted RBP4.56□□□□□ -1.68
SMARCC1-204ENST00000462198 DNAH10Q8IVF4 4471 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 A0A0G2JRQ6 117 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 TEX50A0A1B0GTY4 177 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 A0A1W2PRE2 83 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 GRIFINA4D1Z8 144 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 C15orf61A6NNL5 157 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 PMS2P5A8MQ11 134 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 H3BUT2 72 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 SYNGR2O43760 224 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 HSBP1O75506 76 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 ORM1P02763 201 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 C8orf88P0DMB2 117 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 COX8AP10176 69 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 CRIP2P52943 208 aaPredicted RBP4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 HBG1P69891 147 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 HBG2P69892 147 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 FOXE3Q13461 319 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 PMVKQ15126 192 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 IZUMO4Q1ZYL8 232 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 SPATA31B1PQ5VZV4 182 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 Q6ZUT4 128 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 OR1L8Q8NGR8 309 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 OR4C12Q96R67 309 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 MRPL32Q9BYC8 188 aaKnown RBP4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 GNB4Q9HAV0 340 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 TMEM14BQ9NUH8 114 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 SLC39A9Q9NUM3 307 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 CACNG5Q9UF02 275 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 KMT2AQ03164 3969 aa4.55□□□□□ -1.68
SMARCC1-204ENST00000462198 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 OR4C46A6NHA9 309 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 E7EUB6 86 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 FNDC10F2Z333 226 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 SYS1-DBNDD2H3BUS1 97 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 RHODO00212 210 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 TRGV3P03979 118 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 DEFA4P12838 97 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 PSMB8P28062 276 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 SRIP30626 198 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 ASIPP42127 132 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 HSPE1P61604 102 aaKnown RBP4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 ZNF90Q03938 601 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 FOXI1Q12951 378 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 KLF5Q13887 457 aaPredicted RBP4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 SPINK9Q5DT21 86 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 ASPHD1Q5U4P2 390 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 C18orf65Q6ZTR6 163 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 SYT8Q8NBV8 401 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 KLHL30-AS1Q8NEE0 82 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 ZNRF2Q8NHG8 242 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 DUX3Q96PT4 197 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 SPAG8Q99932 426 aaPredicted RBP4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 KLK15Q9H2R5 256 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 PLEKHA3Q9HB20 300 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 ENY2Q9NPA8 101 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 NDUFA4L2Q9NRX3 87 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 PSENENQ9NZ42 101 aa4.54□□□□□ -1.68
SMARCC1-204ENST00000462198 CGB1A6NKQ9 187 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 SNURFLB1AK76 121 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 F5H768 121 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 H3BMG7 143 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 H3BUA1 57 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 CXorf1O96002 111 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 SMIM13P0DJ93 91 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 NDUFV3P56181 108 aaKnown RBP4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 ERHP84090 104 aaKnown RBP4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 PRCDQ00LT1 54 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 RPEL1Q2QD12 228 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 FAM106AQ4KMX7 169 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 TTC32Q5I0X7 151 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 LYRM7Q5U5X0 104 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 Q6AWC8 147 aa4.53□□□□□ -1.68
SMARCC1-204ENST00000462198 TMEM136Q6ZRR5 245 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms