RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 FAM159AQ6UWV7 190 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 LINC00311Q8N616 119 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 OR10J6PQ8NGY7 276 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 SCGB1C1Q8TD33 95 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 RTN4IP1Q8WWV3 396 aaPredicted RBP3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 RPEQ96AT9 228 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 LINC00527Q9UJ94 153 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 TIMM9Q9Y5J7 89 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 SELENOKQ9Y6D0 94 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 CXorf1O96002 111 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 PRSS1P07477 247 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 IFITM1P13164 125 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 SUPT4H1P63272 117 aaKnown RBP3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 CATR1Q13166 79 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 KLF5Q13887 457 aaPredicted RBP3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 TTC32Q5I0X7 151 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 MINOS1Q5TGZ0 78 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 ZNF833PQ6ZTB9 187 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 VKORC1L1Q8N0U8 176 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 ZNF645Q8N7E2 425 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 OR51H1Q8NH63 302 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 C2orf48Q96LS8 159 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 NABP2Q9BQ15 211 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 TMEM70Q9BUB7 260 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 SH3BGRL3Q9H299 93 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 C11orf1Q9H5F2 150 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 IL36BQ9NZH7 164 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 GNG13Q9P2W3 67 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 TCF19Q9Y242 345 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 YTHDF2Q9Y5A9 579 aaKnown RBP3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 MINOS1-NBL1R4GNA1 71 aa3.66□□□□□ -1.82
ATPAF1-203ENST00000460928 TET2Q6N021 2002 aaPredicted RBP3.65□□□□□ -1.82
ATPAF1-203ENST00000460928 OR4C46A6NHA9 309 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 CEBPZOSA8MTT3 80 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 FCN1O00602 326 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 GAS8-AS1O95177 125 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 PPYP01298 95 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 IGKV1-16P04430 117 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 ATP5G1P05496 136 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 SMIM13P0DJ93 91 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 APELAP0DMC3 54 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 FCGR2BP31994 310 aaPredicted RBP3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 VDAC2P45880 294 aaPredicted RBP3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 ATP5G3P48201 142 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 XGP55808 180 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 ATP5G2Q06055 141 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 RPEL1Q2QD12 228 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 TIGITQ495A1 244 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 ABCA11PQ4W5N1 156 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 LYRM7Q5U5X0 104 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF818PQ6ZRF7 136 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 TMEM136Q6ZRR5 245 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 SPATA12Q7Z6I5 190 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF329Q86UD4 541 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 Q8N6K4 173 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 GATAD1Q8WUU5 269 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 GTSF1Q8WW33 167 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 PPDPFLQ8WWR9 84 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 FLYWCH2Q96CP2 140 aaKnown RBP3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 FBXL15Q9H469 300 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF702PQ9H963 129 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 GNB4Q9HAV0 340 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 SLC39A9Q9NUM3 307 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 TECRQ9NZ01 308 aaKnown RBP3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 HIGD1BQ9P298 99 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 LSM5Q9Y4Y9 91 aaKnown RBP3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 V9GYY9 64 aa3.65□□□□□ -1.83
ATPAF1-203ENST00000460928 TRAV3A0A0B4J244 114 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 GRIFINA4D1Z8 144 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 CRYM-AS1A6NIL9 109 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 C2orf70A6NJV1 201 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 ZFP92A6NM28 416 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 NCBP2LA6PVI3 153 aaKnown RBP3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 GGTLC3B5MD39 225 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 C9JAW5 83 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 HSBP1O75506 76 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 MT-ATP8P03928 68 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF137PP52743 207 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 EMP1P54849 157 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC01547P58512 204 aaPredicted RBP3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 NDPQ00604 133 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF816Q0VGE8 651 aaPredicted RBP3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 EIF4EBP1Q13541 118 aaPredicted RBP3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 TAL2Q16559 108 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 SP6Q3SY56 376 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 C10orf55Q5SWW7 151 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 MORN3Q6PF18 240 aaPredicted RBP3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 AMTNQ6UX39 209 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 Q6ZVQ6 151 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 OR10G7Q8NGN6 311 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 TSKUQ8WUA8 353 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 CHCHD1Q96BP2 118 aaKnown RBP3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 PRADC1Q9BSG0 188 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 FAM103A1Q9BTL3 118 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms