RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SCO2A0A1W2PP80 73 aa16.05■□□□□ 0.16
CBX3-204ENST00000456948 RNASE3P12724 160 aaKnown RBP16.05■□□□□ 0.16
CBX3-204ENST00000456948 ZNF674Q2M3X9 581 aa16.05■□□□□ 0.16
CBX3-204ENST00000456948 PIK3CD-AS1Q5SR53 167 aa16.05■□□□□ 0.16
CBX3-204ENST00000456948 SH2D6Q7Z4S9 175 aa16.05■□□□□ 0.16
CBX3-204ENST00000456948 SYT8Q8NBV8 401 aa16.05■□□□□ 0.16
CBX3-204ENST00000456948 IL36BQ9NZH7 164 aa16.05■□□□□ 0.16
CBX3-204ENST00000456948 KRBOX1C9JBD0 128 aa16.04■□□□□ 0.16
CBX3-204ENST00000456948 M0R036 132 aa16.04■□□□□ 0.16
CBX3-204ENST00000456948 TAGLN2P37802 199 aaKnown RBP16.04■□□□□ 0.16
CBX3-204ENST00000456948 CRIP1P50238 77 aa16.04■□□□□ 0.16
CBX3-204ENST00000456948 C9orf62Q8N4C0 152 aa16.04■□□□□ 0.16
CBX3-204ENST00000456948 DNAH10Q8IVF4 4471 aa16.04■□□□□ 0.16
CBX3-204ENST00000456948 A8MWV9 139 aa16.03■□□□□ 0.16
CBX3-204ENST00000456948 RS1O15537 224 aa16.03■□□□□ 0.16
CBX3-204ENST00000456948 GYPEP15421 78 aa16.03■□□□□ 0.16
CBX3-204ENST00000456948 CCL20P78556 96 aa16.03■□□□□ 0.16
CBX3-204ENST00000456948 K7EQD1 137 aa16.02■□□□□ 0.16
CBX3-204ENST00000456948 PDE6DO43924 150 aa16.02■□□□□ 0.16
CBX3-204ENST00000456948 ZNF506Q5JVG8 444 aa16.02■□□□□ 0.16
CBX3-204ENST00000456948 DNLZQ5SXM8 178 aa16.02■□□□□ 0.16
CBX3-204ENST00000456948 CFAP126Q5VTH2 177 aa16.02■□□□□ 0.16
CBX3-204ENST00000456948 PRADC1Q9BSG0 188 aa16.02■□□□□ 0.16
CBX3-204ENST00000456948 PGPEP1LA6NFU8 196 aa16.01■□□□□ 0.15
CBX3-204ENST00000456948 LINC01559Q495D7 138 aa16.01■□□□□ 0.15
CBX3-204ENST00000456948 PHLDA3Q9Y5J5 127 aa16.01■□□□□ 0.15
CBX3-204ENST00000456948 A0A1W2PPQ1 181 aa16■□□□□ 0.15
CBX3-204ENST00000456948 PRSS29PA6NIE9 313 aa16■□□□□ 0.15
CBX3-204ENST00000456948 GATA1P15976 413 aaPredicted RBP16■□□□□ 0.15
CBX3-204ENST00000456948 RPL35P42766 123 aaKnown RBP16■□□□□ 0.15
CBX3-204ENST00000456948 MEF2BQ02080 365 aaPredicted RBP16■□□□□ 0.15
CBX3-204ENST00000456948 NHLRC2Q8NBF2 726 aa16■□□□□ 0.15
CBX3-204ENST00000456948 TRBV6-4A0A1B0GX49 114 aa15.99■□□□□ 0.15
CBX3-204ENST00000456948 H3BVH4 76 aa15.99■□□□□ 0.15
CBX3-204ENST00000456948 ARMS2P0C7Q2 107 aa15.99■□□□□ 0.15
CBX3-204ENST00000456948 MGST1P10620 155 aaKnown RBP15.99■□□□□ 0.15
CBX3-204ENST00000456948 BLOC1S1P78537 153 aa15.99■□□□□ 0.15
CBX3-204ENST00000456948 RHOHQ15669 191 aa15.99■□□□□ 0.15
CBX3-204ENST00000456948 LYPD5Q6UWN5 251 aa15.99■□□□□ 0.15
CBX3-204ENST00000456948 C11orf52Q96A22 123 aa15.99■□□□□ 0.15
CBX3-204ENST00000456948 GRIFINA4D1Z8 144 aa15.98■□□□□ 0.15
CBX3-204ENST00000456948 SIVA1O15304 175 aa15.98■□□□□ 0.15
CBX3-204ENST00000456948 ZFP2Q6ZN57 461 aa15.98■□□□□ 0.15
CBX3-204ENST00000456948 C6orf223Q8N319 242 aa15.98■□□□□ 0.15
CBX3-204ENST00000456948 MLST8Q9BVC4 326 aa15.98■□□□□ 0.15
CBX3-204ENST00000456948 VAX2Q9UIW0 290 aa15.98■□□□□ 0.15
CBX3-204ENST00000456948 TMSB15BA0A087X1C1 80 aa15.97■□□□□ 0.15
CBX3-204ENST00000456948 RTL8CO15255 209 aa15.97■□□□□ 0.15
CBX3-204ENST00000456948 BTF3P20290 206 aaKnown RBP15.97■□□□□ 0.15
CBX3-204ENST00000456948 TRAV9-2A0A087WT02 112 aa15.96■□□□□ 0.15
CBX3-204ENST00000456948 NXPH4O95158 308 aa15.96■□□□□ 0.15
CBX3-204ENST00000456948 BCL2P10415 239 aa15.96■□□□□ 0.15
CBX3-204ENST00000456948 PRR27Q6MZM9 219 aa15.96■□□□□ 0.15
CBX3-204ENST00000456948 SLC25A29Q8N8R3 303 aa15.96■□□□□ 0.15
CBX3-204ENST00000456948 DAZAP1Q96EP5 407 aaKnown RBP15.96■□□□□ 0.15
CBX3-204ENST00000456948 MED9Q9NWA0 146 aa15.96■□□□□ 0.15
CBX3-204ENST00000456948 BOLA1Q9Y3E2 137 aa15.96■□□□□ 0.15
CBX3-204ENST00000456948 IGHV3-73A0A0B4J1V6 119 aa15.95■□□□□ 0.14
CBX3-204ENST00000456948 RHODO00212 210 aa15.95■□□□□ 0.14
CBX3-204ENST00000456948 GNG4P50150 75 aa15.95■□□□□ 0.14
CBX3-204ENST00000456948 ZFP82Q8N141 532 aa15.95■□□□□ 0.14
CBX3-204ENST00000456948 SMIM12Q96EX1 92 aa15.95■□□□□ 0.14
CBX3-204ENST00000456948 BIN3Q9NQY0 253 aa15.95■□□□□ 0.14
CBX3-204ENST00000456948 CXCL1P09341 107 aa15.94■□□□□ 0.14
CBX3-204ENST00000456948 MED14OSP0DP75 135 aa15.94■□□□□ 0.14
CBX3-204ENST00000456948 ALKAL2Q6UX46 152 aa15.94■□□□□ 0.14
CBX3-204ENST00000456948 PARLQ9H300 379 aa15.94■□□□□ 0.14
CBX3-204ENST00000456948 DMRTA1Q5VZB9 504 aa15.93■□□□□ 0.14
CBX3-204ENST00000456948 CENPWQ5EE01 88 aa15.92■□□□□ 0.14
CBX3-204ENST00000456948 SCRT2Q9NQ03 307 aa15.92■□□□□ 0.14
CBX3-204ENST00000456948 A0A1B0GVG6 124 aa15.91■□□□□ 0.14
CBX3-204ENST00000456948 K7EP13 123 aa15.91■□□□□ 0.14
CBX3-204ENST00000456948 M0R381 172 aa15.91■□□□□ 0.14
CBX3-204ENST00000456948 TIRAPP58753 221 aa15.91■□□□□ 0.14
CBX3-204ENST00000456948 DERL1Q9BUN8 251 aa15.91■□□□□ 0.14
CBX3-204ENST00000456948 SFRP2Q96HF1 295 aa15.9■□□□□ 0.14
CBX3-204ENST00000456948 LY96Q9Y6Y9 160 aa15.9■□□□□ 0.14
CBX3-204ENST00000456948 LOC100131303A0A0U1RQF7 123 aa15.89■□□□□ 0.13
CBX3-204ENST00000456948 XKRY2A2RUG3 117 aa15.89■□□□□ 0.13
CBX3-204ENST00000456948 EVI2AP22794 236 aa15.89■□□□□ 0.13
CBX3-204ENST00000456948 RPS20P60866 119 aaKnown RBP15.89■□□□□ 0.13
CBX3-204ENST00000456948 FAM74A4Q5TZK3 123 aa15.89■□□□□ 0.13
CBX3-204ENST00000456948 DNAH2Q9P225 4427 aa15.88■□□□□ 0.13
CBX3-204ENST00000456948 TRAV8-6A0A0B4J262 113 aa15.88■□□□□ 0.13
CBX3-204ENST00000456948 RAB19A4D1S5 217 aa15.87■□□□□ 0.13
CBX3-204ENST00000456948 NKX2-5P52952 324 aaPredicted RBP15.87■□□□□ 0.13
CBX3-204ENST00000456948 RPL19P84098 196 aaKnown RBP15.87■□□□□ 0.13
CBX3-204ENST00000456948 SPANXN1Q5VSR9 72 aa15.87■□□□□ 0.13
CBX3-204ENST00000456948 ATP6V0E2Q8NHE4 81 aa15.87■□□□□ 0.13
CBX3-204ENST00000456948 HECTD4Q9Y4D8 3996 aa15.86■□□□□ 0.13
CBX3-204ENST00000456948 JPT2Q9H910 190 aa15.86■□□□□ 0.13
CBX3-204ENST00000456948 RBFOX3A6NFN3 312 aa15.85■□□□□ 0.13
CBX3-204ENST00000456948 P01737 135 aa15.85■□□□□ 0.13
CBX3-204ENST00000456948 OR5AL1P0C617 328 aa15.85■□□□□ 0.13
CBX3-204ENST00000456948 ZNF575Q86XF7 245 aa15.85■□□□□ 0.13
CBX3-204ENST00000456948 C10orf126Q8N4M7 172 aa15.85■□□□□ 0.13
CBX3-204ENST00000456948 SAMD10Q9BYL1 202 aa15.85■□□□□ 0.13
CBX3-204ENST00000456948 GTSF1LQ9H1H1 148 aa15.85■□□□□ 0.13
CBX3-204ENST00000456948 OR10J3Q5JRS4 329 aa15.84■□□□□ 0.13
CBX3-204ENST00000456948 NFE4Q86UQ8 179 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms