RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 SMKR1H3BMG3 65 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 DEFB1P60022 68 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 Q6AWC8 147 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 CHCHD1Q96BP2 118 aaKnown RBP9.23□□□□□ -0.93
COL27A1-202ENST00000451716 IGKV3-7A0A075B6H7 116 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 A6NDX4 124 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
COL27A1-202ENST00000451716 TMEM70Q9BUB7 260 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 TLN2Q9Y4G6 2542 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 FAM223BA6NKX1 122 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 FXYD7P58549 80 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 COX8CQ7Z4L0 72 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 FAM223AQ8IWN6 122 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 B4DSR2 109 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 F5H768 121 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 IGHG2P01859 326 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 IGF1P05019 195 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 IFI27P40305 119 aaPredicted RBP9.22□□□□□ -0.93
COL27A1-202ENST00000451716 LOXL1Q08397 574 aaPredicted RBP9.22□□□□□ -0.93
COL27A1-202ENST00000451716 PMCHL2Q9BQD1 86 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 C11orf21Q9P2W6 132 aa9.22□□□□□ -0.93
COL27A1-202ENST00000451716 NCR2O95944 276 aa9.21□□□□□ -0.93
COL27A1-202ENST00000451716 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.93
COL27A1-202ENST00000451716 C16orf92Q96LL3 132 aa9.21□□□□□ -0.93
COL27A1-202ENST00000451716 U3KQE9 123 aa9.21□□□□□ -0.93
COL27A1-202ENST00000451716 FAM104BQ5XKR9 115 aa9.21□□□□□ -0.94
COL27A1-202ENST00000451716 ZNF493Q6ZR52 646 aa9.21□□□□□ -0.94
COL27A1-202ENST00000451716 C20orf173Q96LM9 149 aa9.21□□□□□ -0.94
COL27A1-202ENST00000451716 SYS1-DBNDD2H3BUS1 97 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 IGLC6P0CF74 106 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 CRIP2P52943 208 aaPredicted RBP9.2□□□□□ -0.94
COL27A1-202ENST00000451716 RPL11P62913 178 aaKnown RBP9.2□□□□□ -0.94
COL27A1-202ENST00000451716 MRPL51Q4U2R6 128 aaKnown RBP9.2□□□□□ -0.94
COL27A1-202ENST00000451716 GATD1Q8NB37 220 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 AP5S1Q9NUS5 200 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 TEX15Q9BXT5 2789 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 GAS8-AS1O95177 125 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 OR4X2Q8NGF9 303 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 PRELID3AQ96N28 172 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 ZNF469Q96JG9 3925 aaPredicted RBP9.2□□□□□ -0.94
COL27A1-202ENST00000451716 CREBBPQ92793 2442 aa9.2□□□□□ -0.94
COL27A1-202ENST00000451716 UBR5O95071 2799 aaPredicted RBP9.2□□□□□ -0.94
COL27A1-202ENST00000451716 IGKV3D-20A0A0C4DH25 116 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 IGHV4-59P01825 116 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 EDN2P20800 178 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 FHL3Q13643 280 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 NDUFV3P56181 108 aaKnown RBP9.19□□□□□ -0.94
COL27A1-202ENST00000451716 MEIG1Q5JSS6 88 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 C10orf99Q6UWK7 81 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 C3orf56Q8N813 242 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 PSMG3-AS1Q96PY0 264 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 TENM4Q6N022 2769 aa9.19□□□□□ -0.94
COL27A1-202ENST00000451716 SRD5A1P18405 259 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 DEFB112Q30KQ8 113 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 FAM159AQ6UWV7 190 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 GPHB5Q86YW7 130 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 SIGLEC8Q9NYZ4 499 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 CCDC168Q8NDH2 2452 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 CKS2P33552 79 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 ORMDL3Q8N138 153 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 RBAKDNA6NC62 111 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 APOMO95445 188 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 NPYP01303 97 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 OR5AL1P0C617 328 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 PRR9Q5T870 116 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 DNAJC30Q96LL9 226 aa9.18□□□□□ -0.94
COL27A1-202ENST00000451716 SPRY2O43597 315 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 COX8AP10176 69 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 KRTAP10-9P60411 292 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 F6UB75 175 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 H3BMG7 143 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 NDUFA4O00483 81 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 MAP1LC3CQ9BXW4 147 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 MS4A6AQ9H2W1 248 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 SORL1Q92673 2214 aa9.17□□□□□ -0.94
COL27A1-202ENST00000451716 MYO9AB2RTY4 2548 aa9.16□□□□□ -0.94
COL27A1-202ENST00000451716 A0A096LNJ9 63 aa9.16□□□□□ -0.94
COL27A1-202ENST00000451716 CRXO43186 299 aaPredicted RBP9.16□□□□□ -0.94
COL27A1-202ENST00000451716 FOXI1Q12951 378 aa9.16□□□□□ -0.94
COL27A1-202ENST00000451716 KIR2DL4Q99706 377 aa9.16□□□□□ -0.94
COL27A1-202ENST00000451716 GATA1P15976 413 aaPredicted RBP9.16□□□□□ -0.94
COL27A1-202ENST00000451716 FAM19A5Q7Z5A7 132 aaPredicted RBP9.16□□□□□ -0.94
COL27A1-202ENST00000451716 USMG5Q96IX5 58 aa9.16□□□□□ -0.94
COL27A1-202ENST00000451716 C18orf15Q96N68 181 aa9.16□□□□□ -0.94
COL27A1-202ENST00000451716 U3KQK5 164 aa9.16□□□□□ -0.94
COL27A1-202ENST00000451716 SONP18583 2426 aaKnown RBP9.16□□□□□ -0.94
COL27A1-202ENST00000451716 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 COX6B1P14854 86 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 EVI2AP22794 236 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 RNF185Q96GF1 192 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 A0A1B0GWB2 263 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 IGLV1-40P01703 118 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms