RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 KIAA2026Q5HYC2 2103 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 SCXQ7RTU7 201 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 ADM2Q7Z4H4 148 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 AMN1Q8IY45 258 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 DAND5Q8N907 189 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 APCDD1LQ8NCL9 501 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 UPK3BQ9BT76 320 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 CYSTM1Q9H1C7 97 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 PLXNB3Q9ULL4 1909 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 AFDNP55196 1824 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 COL4A5P29400 1685 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 TEP1Q99973 2627 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 TRBV6-6A0A0A6YYG2 114 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGHV3-72A0A0B4J1Y9 119 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 TIMM17BO60830 172 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGKV3-15P01624 115 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 IL5P05113 134 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 SSR2P43308 183 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 FGF12P61328 243 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 SYCNQ0VAF6 134 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 PMCHL1Q16048 86 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 NTM-AS1Q6ZSK4 140 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 DOCK9Q9BZ29 2069 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 BCORQ6W2J9 1755 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGHV3-11P01762 117 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 S100A4P26447 101 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 MRPS36P82909 103 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 PLA2G12AQ9BZM1 189 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF462Q96JM2 2506 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 MYO5AQ9Y4I1 1855 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 SLX4Q8IY92 1834 aa2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 SIPA1L3O60292 1781 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 COL5A3P25940 1745 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-207ENST00000441725 PTPRZ1P23471 2315 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGKV3D-20A0A0C4DH25 116 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 MDFIC2A0A1B0GVS7 189 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF816Q0VGE8 651 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 RNASE13Q5GAN3 156 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 SPINK14Q6IE38 97 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 SOSTDC1Q6X4U4 206 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 MYOZ3Q8TDC0 251 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 OR8B2Q96RD0 313 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 CYTL1Q9NRR1 136 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 TMEM242Q9NWH2 141 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 XIRP2A4UGR9 3374 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 NACAE9PAV3 2078 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 DNAH12Q6ZR08 3092 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZFYVE26Q68DK2 2539 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 RGPD2P0DJD1 1756 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 NRXN2Q9P2S2 1712 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 ANKRD17O75179 2603 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 A0A096LNJ9 63 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 UMAD1C9J7I0 102 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 BPY2O14599 106 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 FUSP35637 526 aaKnown RBP eCLIP2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 MPV17LQ2QL34 196 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 TMEM256Q8N2U0 113 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 Q8N8P6 123 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 C15orf53Q8NAA6 179 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 TTTY13Q9BZ97 58 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 PDCD11Q14690 1871 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 DMXL1Q9Y485 3027 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 MRC1P22897 1456 aa2.67□□□□□ -1.98
CDC42BPA-207ENST00000441725 WDR87Q6ZQQ6 2873 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 PTPRBP23467 1997 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 SSC5DA1L4H1 1573 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 NUP98P52948 1817 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 UBE2L5PA0A1B0GUS4 154 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 PINLYPA6NC86 204 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 A6NN06 94 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGLV3-25P01717 112 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 CGB3P0DN86 165 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 CGB7P0DN87 165 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF32P17041 273 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 PCBD1P61457 104 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 BLCAPP62952 87 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 UBE2L3P68036 154 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 PATE2Q6UY27 113 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 OR5AS1Q8N127 324 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 SLC25A29Q8N8R3 303 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 CMTM2Q8TAZ6 248 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 TSKUQ8WUA8 353 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF714Q96N38 554 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 CXCL16Q9H2A7 254 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 TAC3Q9UHF0 121 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 CABIN1Q9Y6J0 2220 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 KANTRA0A1W2PQU2 76 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 LEPROTO15243 131 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGHV3-7P01780 117 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 KRTAP10-6P60371 365 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 CIRBPQ14011 172 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF345Q14585 488 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF322Q6U7Q0 402 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 ODF3Q96PU9 254 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 HIGD1BQ9P298 99 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 LINC00474Q9P2X8 69 aa2.66□□□□□ -1.98
CDC42BPA-207ENST00000441725 ARID1AO14497 2285 aa2.65□□□□□ -1.99
CDC42BPA-207ENST00000441725 IGLV3-9A0A075B6K5 115 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms