RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 ZNF415Q09FC8 603 aa15.19■□□□□ 0.02
VPS13B-204ENST00000441350 MRAPQ8TCY5 172 aa15.19■□□□□ 0.02
VPS13B-204ENST00000441350 CNFNQ9BYD5 112 aa15.19■□□□□ 0.02
VPS13B-204ENST00000441350 GSN-AS1Q9NRJ2 163 aa15.19■□□□□ 0.02
VPS13B-204ENST00000441350 MUC4Q99102 2169 aa15.18■□□□□ 0.02
VPS13B-204ENST00000441350 C16orf74Q96GX8 76 aa15.18■□□□□ 0.02
VPS13B-204ENST00000441350 TIMM8BQ9Y5J9 83 aaPredicted RBP15.18■□□□□ 0.02
VPS13B-204ENST00000441350 PLAC8L1A1L4L8 177 aa15.17■□□□□ 0.02
VPS13B-204ENST00000441350 OR10AG1Q8NH19 301 aa15.17■□□□□ 0.02
VPS13B-204ENST00000441350 IL17DQ8TAD2 202 aa15.17■□□□□ 0.02
VPS13B-204ENST00000441350 BTF3L4Q96K17 158 aa15.17■□□□□ 0.02
VPS13B-204ENST00000441350 WDR73Q6P4I2 378 aa15.17■□□□□ 0.02
VPS13B-204ENST00000441350 MUC21A0A0G2JKD1 596 aa15.16■□□□□ 0.02
VPS13B-204ENST00000441350 MUC21A0A140T8X8 626 aa15.16■□□□□ 0.02
VPS13B-204ENST00000441350 A0A1B0GUT8 65 aa15.16■□□□□ 0.02
VPS13B-204ENST00000441350 SPINK4O60575 86 aa15.16■□□□□ 0.02
VPS13B-204ENST00000441350 TM2D3Q9BRN9 247 aa15.16■□□□□ 0.02
VPS13B-204ENST00000441350 RETNQ9HD89 108 aa15.16■□□□□ 0.02
VPS13B-204ENST00000441350 PHLDA3Q9Y5J5 127 aa15.16■□□□□ 0.02
VPS13B-204ENST00000441350 MEGF8Q7Z7M0 2845 aa15.15■□□□□ 0.02
VPS13B-204ENST00000441350 TRBV24-1A0A075B6N3 115 aa15.15■□□□□ 0.02
VPS13B-204ENST00000441350 IGHV4-4A0A075B6R2 117 aa15.15■□□□□ 0.02
VPS13B-204ENST00000441350 NXPH4O95158 308 aa15.15■□□□□ 0.02
VPS13B-204ENST00000441350 MIFP14174 115 aa15.15■□□□□ 0.02
VPS13B-204ENST00000441350 SPXQ9BT56 116 aa15.15■□□□□ 0.02
VPS13B-204ENST00000441350 TGIF2-C20orf24A0A0A6YYL0 155 aa15.14■□□□□ 0.01
VPS13B-204ENST00000441350 CACNG7P62955 275 aa15.14■□□□□ 0.01
VPS13B-204ENST00000441350 Q8NAQ8 132 aa15.14■□□□□ 0.01
VPS13B-204ENST00000441350 DEFA6Q01524 100 aa15.14■□□□□ 0.01
VPS13B-204ENST00000441350 DAZ2Q13117 558 aaKnown RBP15.14■□□□□ 0.01
VPS13B-204ENST00000441350 MRPL54Q6P161 138 aaKnown RBP15.14■□□□□ 0.01
VPS13B-204ENST00000441350 ATP5L2Q7Z4Y8 100 aa15.14■□□□□ 0.01
VPS13B-204ENST00000441350 PTH2Q96A98 100 aa15.14■□□□□ 0.01
VPS13B-204ENST00000441350 BORCS7Q96B45 105 aa15.14■□□□□ 0.01
VPS13B-204ENST00000441350 IGHV4-28A0A0C4DH34 117 aa15.13■□□□□ 0.01
VPS13B-204ENST00000441350 A0A1B0GXF2 115 aa15.13■□□□□ 0.01
VPS13B-204ENST00000441350 SNURFLB1AK76 121 aa15.13■□□□□ 0.01
VPS13B-204ENST00000441350 NTF3P20783 257 aa15.13■□□□□ 0.01
VPS13B-204ENST00000441350 SSTP61278 116 aa15.13■□□□□ 0.01
VPS13B-204ENST00000441350 RIGQ13278 110 aa15.13■□□□□ 0.01
VPS13B-204ENST00000441350 ZFP82Q8N141 532 aa15.13■□□□□ 0.01
VPS13B-204ENST00000441350 SPATA25Q9BR10 227 aa15.13■□□□□ 0.01
VPS13B-204ENST00000441350 M0R2P5 195 aa15.12■□□□□ 0.01
VPS13B-204ENST00000441350 SPANXN1Q5VSR9 72 aa15.12■□□□□ 0.01
VPS13B-204ENST00000441350 DMRTA1Q5VZB9 504 aa15.12■□□□□ 0.01
VPS13B-204ENST00000441350 B9D2Q9BPU9 175 aa15.12■□□□□ 0.01
VPS13B-204ENST00000441350 MSRB1Q9NZV6 116 aa15.12■□□□□ 0.01
VPS13B-204ENST00000441350 COLCA2A8K830 154 aa15.11■□□□□ 0.01
VPS13B-204ENST00000441350 M0R381 172 aa15.11■□□□□ 0.01
VPS13B-204ENST00000441350 TWIST1Q15672 202 aa15.1■□□□□ 0.01
VPS13B-204ENST00000441350 ZNF876PQ49A33 203 aa15.1■□□□□ 0.01
VPS13B-204ENST00000441350 NOP10Q9NPE3 64 aaKnown RBP15.1■□□□□ 0.01
VPS13B-204ENST00000441350 A0A1B0GW15 77 aa15.1■□□□□ 0.01
VPS13B-204ENST00000441350 PIK3CD-AS1Q5SR53 167 aa15.1■□□□□ 0.01
VPS13B-204ENST00000441350 RASL11AQ6T310 242 aa15.1■□□□□ 0.01
VPS13B-204ENST00000441350 SYT8Q8NBV8 401 aa15.1■□□□□ 0.01
VPS13B-204ENST00000441350 RASL10AQ92737 203 aa15.1■□□□□ 0.01
VPS13B-204ENST00000441350 FAM210BQ96KR6 192 aa15.1■□□□□ 0.01
VPS13B-204ENST00000441350 TENM3Q9P273 2699 aa15.09■□□□□ 0.01
VPS13B-204ENST00000441350 EMP1P54849 157 aa15.09■□□□□ 0.01
VPS13B-204ENST00000441350 HBBP68871 147 aa15.09■□□□□ 0.01
VPS13B-204ENST00000441350 LGALS9BQ3B8N2 356 aa15.09■□□□□ 0.01
VPS13B-204ENST00000441350 CAMPP49913 170 aa15.08■□□□□ 0
VPS13B-204ENST00000441350 MRPL16Q9NX20 251 aaKnown RBP15.08■□□□□ 0
VPS13B-204ENST00000441350 DEFB4AO15263 64 aa15.07■□□□□ 0
VPS13B-204ENST00000441350 NDUFAF3Q9BU61 184 aa15.07■□□□□ 0
VPS13B-204ENST00000441350 TRGV1A0A0A0MS02 117 aa15.06■□□□□ 0
VPS13B-204ENST00000441350 Q6ZTI0 123 aa15.06■□□□□ 0
VPS13B-204ENST00000441350 GATD1Q8NB37 220 aa15.06■□□□□ 0
VPS13B-204ENST00000441350 S100A8P05109 93 aa15.06■□□□□ 0
VPS13B-204ENST00000441350 LINC00612Q8N6U2 182 aa15.05■□□□□ -0
VPS13B-204ENST00000441350 C11orf68Q9H3H3 251 aaKnown RBP15.05■□□□□ -0
VPS13B-204ENST00000441350 ZMAT4Q9H898 229 aa15.05■□□□□ -0
VPS13B-204ENST00000441350 JPT2Q9H910 190 aa15.05■□□□□ -0
VPS13B-204ENST00000441350 DKK2Q9UBU2 259 aa15.05■□□□□ -0
VPS13B-204ENST00000441350 LYRM9A8MSI8 78 aa15.04■□□□□ -0
VPS13B-204ENST00000441350 TRGC1P0CF51 173 aa15.04■□□□□ -0
VPS13B-204ENST00000441350 EVI2AP22794 236 aa15.04■□□□□ -0
VPS13B-204ENST00000441350 COX19Q49B96 90 aa15.04■□□□□ -0
VPS13B-204ENST00000441350 TMEM136Q6ZRR5 245 aa15.04■□□□□ -0
VPS13B-204ENST00000441350 AP1S3Q96PC3 154 aa15.04■□□□□ -0
VPS13B-204ENST00000441350 GNB1LQ9BYB4 327 aa15.04■□□□□ -0
VPS13B-204ENST00000441350 TMEM191AQ9H0A3 160 aa15.04■□□□□ -0
VPS13B-204ENST00000441350 DNAH9Q9NYC9 4486 aa15.03■□□□□ -0
VPS13B-204ENST00000441350 RAB5AP20339 215 aa15.03■□□□□ -0
VPS13B-204ENST00000441350 FAM222AQ5U5X8 452 aa15.03■□□□□ -0
VPS13B-204ENST00000441350 C14orf178Q8N769 122 aaPredicted RBP15.03■□□□□ -0
VPS13B-204ENST00000441350 KIF25-AS1Q9Y6Z4 181 aa15.03■□□□□ -0
VPS13B-204ENST00000441350 HUWE1Q7Z6Z7 4374 aaKnown RBP15.02■□□□□ -0
VPS13B-204ENST00000441350 GAGE12BA1L429 117 aa15.02□□□□□ -0.01
VPS13B-204ENST00000441350 A8MWV9 139 aa15.02□□□□□ -0.01
VPS13B-204ENST00000441350 GAGE7O76087 117 aa15.02□□□□□ -0.01
VPS13B-204ENST00000441350 GAGE12FP0CL80 117 aa15.02□□□□□ -0.01
VPS13B-204ENST00000441350 GAGE12GP0CL81 117 aa15.02□□□□□ -0.01
VPS13B-204ENST00000441350 GAGE12IP0CL82 117 aa15.02□□□□□ -0.01
VPS13B-204ENST00000441350 RAB4BP61018 213 aa15.02□□□□□ -0.01
VPS13B-204ENST00000441350 SMIM15Q7Z3B0 74 aa15.02□□□□□ -0.01
VPS13B-204ENST00000441350 PRKDCP78527 4128 aaKnown RBP15.01□□□□□ -0.01
VPS13B-204ENST00000441350 CRYGDP07320 174 aa15.01□□□□□ -0.01
VPS13B-204ENST00000441350 CFAP126Q5VTH2 177 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms