RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 GSKIPQ9P0R6 139 aa6.02□□□□□ -1.45
SMPD4-208ENST00000439029 WDR83OSQ9Y284 106 aa6.02□□□□□ -1.45
SMPD4-208ENST00000439029 IGLV10-54A0A075B6I4 117 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 C7orf66A4D0T2 115 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 RPL29P47914 159 aaKnown RBP6.01□□□□□ -1.45
SMPD4-208ENST00000439029 BCAP31P51572 246 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 FGF8P55075 233 aaPredicted RBP6.01□□□□□ -1.45
SMPD4-208ENST00000439029 CNBPP62633 177 aaKnown RBP6.01□□□□□ -1.45
SMPD4-208ENST00000439029 COX6A2Q02221 97 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 STPG4Q8N801 248 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 SGK494Q96LW2 274 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 LINC00479Q96M42 142 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 NAA50Q9GZZ1 169 aaKnown RBP6.01□□□□□ -1.45
SMPD4-208ENST00000439029 Q9H521 79 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 TREM1Q9NP99 234 aa6.01□□□□□ -1.45
SMPD4-208ENST00000439029 FAM231BA6NCW3 169 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 TCRBP04435 133 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 FGF7P21781 194 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 MIAQ16674 131 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 PRR26Q8N8Z3 221 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 CLRN3Q8NCR9 226 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 DIRAS2Q96HU8 199 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 NMES1Q9C002 83 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 AP5S1Q9NUS5 200 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 UQCC1Q9NVA1 299 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 LENEPQ9Y5L5 61 aa6□□□□□ -1.45
SMPD4-208ENST00000439029 TRAV26-2A0A0B4J265 109 aa5.99□□□□□ -1.45
SMPD4-208ENST00000439029 FAM24AA6NFZ4 105 aa5.99□□□□□ -1.45
SMPD4-208ENST00000439029 EIF3GO75821 320 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMPD4-208ENST00000439029 RNASE3P12724 160 aaKnown RBP5.99□□□□□ -1.45
SMPD4-208ENST00000439029 RAB5CP51148 216 aa5.99□□□□□ -1.45
SMPD4-208ENST00000439029 ZNF80P51504 273 aaPredicted RBP5.99□□□□□ -1.45
SMPD4-208ENST00000439029 TAS2R30P59541 319 aa5.99□□□□□ -1.45
SMPD4-208ENST00000439029 IAH1Q2TAA2 248 aaPredicted RBP5.99□□□□□ -1.45
SMPD4-208ENST00000439029 ZFP2Q6ZN57 461 aa5.99□□□□□ -1.45
SMPD4-208ENST00000439029 GOLT1AQ6ZVE7 132 aa5.99□□□□□ -1.45
SMPD4-208ENST00000439029 PRSS3P2Q8NHM4 247 aa5.99□□□□□ -1.45
SMPD4-208ENST00000439029 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
SMPD4-208ENST00000439029 C9orf170A2RU37 121 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 A8MWV9 139 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 L7N2F9 121 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 OR7C2O60412 319 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 MBPP02686 304 aaPredicted RBP5.98□□□□□ -1.45
SMPD4-208ENST00000439029 SMIM18P0DKX4 95 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 VAMP2P63027 116 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 FAM74A4Q5TZK3 123 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 UFSP1Q6NVU6 142 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 LINC00269Q8N2A0 174 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 OR10G7Q8NGN6 311 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 CHAC2Q8WUX2 184 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 CHCHD5Q9BSY4 110 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 VCX3AQ9NNX9 186 aa5.98□□□□□ -1.45
SMPD4-208ENST00000439029 RABL2AQ9UBK7 228 aaPredicted RBP5.98□□□□□ -1.45
SMPD4-208ENST00000439029 LSM5Q9Y4Y9 91 aaKnown RBP5.98□□□□□ -1.45
SMPD4-208ENST00000439029 CACNG7P62955 275 aa5.97□□□□□ -1.45
SMPD4-208ENST00000439029 GNG5P63218 68 aa5.97□□□□□ -1.45
SMPD4-208ENST00000439029 TRBV6-8A0A0A6YYG3 113 aa5.96□□□□□ -1.46
SMPD4-208ENST00000439029 PTTG1O95997 202 aa5.96□□□□□ -1.46
SMPD4-208ENST00000439029 UBE2L3P68036 154 aaKnown RBP5.96□□□□□ -1.46
SMPD4-208ENST00000439029 CTF1Q16619 201 aa5.96□□□□□ -1.46
SMPD4-208ENST00000439029 Q6ZRP5 223 aa5.96□□□□□ -1.46
SMPD4-208ENST00000439029 TMED6Q8WW62 240 aa5.96□□□□□ -1.46
SMPD4-208ENST00000439029 PTH2Q96A98 100 aa5.96□□□□□ -1.46
SMPD4-208ENST00000439029 A0A087WXM4 84 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 A0A096LNI7 61 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 CCSO14618 274 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 IFNA7P01567 189 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 FAUP35544 74 aaKnown RBP5.95□□□□□ -1.46
SMPD4-208ENST00000439029 UBE2D3P61077 147 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 UBE2D2P62837 147 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 GAGE6Q13070 117 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 SPANXN2Q5MJ10 180 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 ZNF664Q8N3J9 261 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 CMTM2Q8TAZ6 248 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 THAP6Q8TBB0 222 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 NPCDR1Q9BY65 106 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 PSORS1C2Q9UIG4 136 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 FLVCR2Q9UPI3 526 aa5.95□□□□□ -1.46
SMPD4-208ENST00000439029 IGSF23A1L1A6 192 aa5.94□□□□□ -1.46
SMPD4-208ENST00000439029 NDUFS6O75380 124 aaKnown RBP5.94□□□□□ -1.46
SMPD4-208ENST00000439029 GCGP01275 180 aa5.94□□□□□ -1.46
SMPD4-208ENST00000439029 S100A4P26447 101 aaKnown RBP5.94□□□□□ -1.46
SMPD4-208ENST00000439029 S100A10P60903 97 aa5.94□□□□□ -1.46
SMPD4-208ENST00000439029 RBX1P62877 108 aa5.94□□□□□ -1.46
SMPD4-208ENST00000439029 RPL36AP83881 106 aaKnown RBP5.94□□□□□ -1.46
SMPD4-208ENST00000439029 RPL36ALQ969Q0 106 aaKnown RBP5.94□□□□□ -1.46
SMPD4-208ENST00000439029 SLC25A21Q9BQT8 299 aaPredicted RBP5.94□□□□□ -1.46
SMPD4-208ENST00000439029 SLIRPQ9GZT3 109 aaKnown RBP5.94□□□□□ -1.46
SMPD4-208ENST00000439029 GFRA4Q9GZZ7 299 aa5.94□□□□□ -1.46
SMPD4-208ENST00000439029 PRR34Q9NV39 138 aa5.94□□□□□ -1.46
SMPD4-208ENST00000439029 RSL24D1Q9UHA3 163 aaKnown RBP5.94□□□□□ -1.46
SMPD4-208ENST00000439029 HIGD2BQ4VC39 106 aa5.93□□□□□ -1.46
SMPD4-208ENST00000439029 TOMM5Q8N4H5 51 aa5.93□□□□□ -1.46
SMPD4-208ENST00000439029 OTORQ9NRC9 128 aa5.93□□□□□ -1.46
SMPD4-208ENST00000439029 TRBV7-3A0A075B6L6 115 aa5.92□□□□□ -1.46
SMPD4-208ENST00000439029 IGKV3D-20A0A0C4DH25 116 aa5.92□□□□□ -1.46
SMPD4-208ENST00000439029 FAM25EA8MYX2 175 aa5.92□□□□□ -1.46
SMPD4-208ENST00000439029 H3BVH4 76 aa5.92□□□□□ -1.46
SMPD4-208ENST00000439029 SULT1A1P50225 295 aa5.92□□□□□ -1.46
SMPD4-208ENST00000439029 REG3AQ06141 175 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms