RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 E9PLD3 99 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 F5H768 121 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 SPINK13Q1W4C9 94 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 TRAV4A0A0B4J268 109 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 C11orf86A6NJI1 115 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 UPK3BQ9BT76 320 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 H3BUX3 64 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 BUB3O43684 328 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 UBE2AP49459 152 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 DKK4Q9UBT3 224 aa9.16□□□□□ -0.94
PTCH1-209ENST00000437951 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 TNRC6BQ9UPQ9 1833 aaKnown RBP9.15□□□□□ -0.94
PTCH1-209ENST00000437951 ANGP03950 147 aaKnown RBP9.15□□□□□ -0.94
PTCH1-209ENST00000437951 RNF183Q96D59 192 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 ETV2O00321 342 aaPredicted RBP9.15□□□□□ -0.94
PTCH1-209ENST00000437951 IGFL4Q6B9Z1 124 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 PTH2Q96A98 100 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 WIPF3A6NGB9 483 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 EFNA2O43921 213 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 GATA4P43694 442 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 UBE2E1P51965 193 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 Q8TCH9 128 aa9.15□□□□□ -0.94
PTCH1-209ENST00000437951 TOMM6Q96B49 74 aa9.15□□□□□ -0.95
PTCH1-209ENST00000437951 CLPSP04118 112 aa9.15□□□□□ -0.95
PTCH1-209ENST00000437951 OVOL3O00110 214 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 CD59P13987 128 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 MRPS36P82909 103 aaKnown RBP9.14□□□□□ -0.95
PTCH1-209ENST00000437951 UNQ6494/PRO21346Q6UXR6 183 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 LRRC75A-AS1Q8N1F1 130 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 DEFB105AQ8NG35 78 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 PCDH15Q96QU1 1955 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 TFF1P04155 84 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 KLK9Q9UKQ9 250 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 C1orf195Q5TG92 126 aa9.14□□□□□ -0.95
PTCH1-209ENST00000437951 Q8N1Y9 231 aa9.13□□□□□ -0.95
PTCH1-209ENST00000437951 NDUFA7O95182 113 aa9.13□□□□□ -0.95
PTCH1-209ENST00000437951 IGHV1-69P01742 117 aa9.13□□□□□ -0.95
PTCH1-209ENST00000437951 FXYD2P54710 66 aa9.13□□□□□ -0.95
PTCH1-209ENST00000437951 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
PTCH1-209ENST00000437951 FLVCR1-AS1Q8TAF5 88 aa9.12□□□□□ -0.95
PTCH1-209ENST00000437951 IGHV3-16A0A0C4DH30 117 aa9.12□□□□□ -0.95
PTCH1-209ENST00000437951 MDS2Q8NDY4 140 aa9.12□□□□□ -0.95
PTCH1-209ENST00000437951 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
PTCH1-209ENST00000437951 FAM120AOSQ5T036 256 aa9.12□□□□□ -0.95
PTCH1-209ENST00000437951 IGHV1-58A0A0C4DH39 117 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 MED14OSP0DP75 135 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 SAA4P35542 130 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 PRR30Q53SZ7 412 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-209ENST00000437951 IGHV7-4-1A0A0J9YVY3 117 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 PRR20EP86478 221 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 PRR20CP86479 221 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 PRR20DP86480 221 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 PRR20BP86481 221 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 PRR20AP86496 221 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 PLXNA4Q9HCM2 1894 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 ABCA2Q9BZC7 2435 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 XCL2Q9UBD3 114 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 COX7A2LO14548 114 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 ATP6V0E1O15342 81 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 FOXE3Q13461 319 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 TEX36Q5VZQ5 186 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 MPLKIPQ8TAP9 179 aa9.11□□□□□ -0.95
PTCH1-209ENST00000437951 CCDC168Q8NDH2 2452 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 NDUFA11Q86Y39 141 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 IGKV1-6A0A0C4DH72 117 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 XCL1P47992 114 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 MLANAQ16655 118 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 C9orf47Q6ZRZ4 202 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 IGHV3-38A0A0C4DH36 116 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 CDPF1Q6NVV7 123 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 ZNF503Q96F45 646 aa9.1□□□□□ -0.95
PTCH1-209ENST00000437951 GNLYP22749 145 aa9.09□□□□□ -0.95
PTCH1-209ENST00000437951 ANKRD39Q53RE8 183 aa9.09□□□□□ -0.95
PTCH1-209ENST00000437951 HIST2H2BCQ6DN03 193 aa9.09□□□□□ -0.95
PTCH1-209ENST00000437951 ATG2AQ2TAZ0 1938 aa9.09□□□□□ -0.95
PTCH1-209ENST00000437951 C16orf54Q6UWD8 224 aa9.09□□□□□ -0.95
PTCH1-209ENST00000437951 SPATA12Q7Z6I5 190 aa9.09□□□□□ -0.95
PTCH1-209ENST00000437951 CUL9Q8IWT3 2517 aa9.09□□□□□ -0.95
PTCH1-209ENST00000437951 NUP210Q8TEM1 1887 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-209ENST00000437951 A0A0U1RQV1 116 aa9.08□□□□□ -0.96
PTCH1-209ENST00000437951 TRBV6-1A0A0K0K1D8 114 aa9.08□□□□□ -0.96
PTCH1-209ENST00000437951 MBD3L4A6NDZ8 208 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-209ENST00000437951 MBD3L3A6NE82 208 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-209ENST00000437951 MBD3L5A6NJ08 208 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-209ENST00000437951 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-209ENST00000437951 MBD3L2Q8NHZ7 208 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-209ENST00000437951 FANCD2OSQ96PS1 177 aa9.08□□□□□ -0.96
PTCH1-209ENST00000437951 K7EQD1 137 aa9.08□□□□□ -0.96
PTCH1-209ENST00000437951 BPY2O14599 106 aa9.08□□□□□ -0.96
PTCH1-209ENST00000437951 TIRAPP58753 221 aa9.08□□□□□ -0.96
PTCH1-209ENST00000437951 USP17L23D6RBM5 183 aa9.08□□□□□ -0.96
PTCH1-209ENST00000437951 IGHV4-28A0A0C4DH34 117 aa9.07□□□□□ -0.96
PTCH1-209ENST00000437951 IGKV1-39P01597 117 aa9.07□□□□□ -0.96
PTCH1-209ENST00000437951 IGKV1D-39P04432 117 aa9.07□□□□□ -0.96
PTCH1-209ENST00000437951 SERP2Q8N6R1 65 aa9.07□□□□□ -0.96
PTCH1-209ENST00000437951 LECT2O14960 151 aa9.07□□□□□ -0.96
PTCH1-209ENST00000437951 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
PTCH1-209ENST00000437951 LYNX1G3V0Z9 82 aa9.07□□□□□ -0.96
PTCH1-209ENST00000437951 LYNX1P0DP58 116 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms