RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 KNCNA6PVL3 124 aa15.69■□□□□ 0.1
PTPRF-207ENST00000436724 CRXO43186 299 aaPredicted RBP15.69■□□□□ 0.1
PTPRF-207ENST00000436724 TWIST1Q15672 202 aa15.69■□□□□ 0.1
PTPRF-207ENST00000436724 TRAV12-2A0A075B6T6 113 aa15.68■□□□□ 0.1
PTPRF-207ENST00000436724 IGLL1P15814 213 aa15.68■□□□□ 0.1
PTPRF-207ENST00000436724 ZNF25P17030 456 aaPredicted RBP15.68■□□□□ 0.1
PTPRF-207ENST00000436724 ANXA2RQ3ZCQ2 193 aa15.68■□□□□ 0.1
PTPRF-207ENST00000436724 FOXI2Q6ZQN5 318 aa15.68■□□□□ 0.1
PTPRF-207ENST00000436724 A0A1B0GW15 77 aa15.68■□□□□ 0.1
PTPRF-207ENST00000436724 SYS1-DBNDD2H3BUS1 97 aa15.68■□□□□ 0.1
PTPRF-207ENST00000436724 LEPROTL1O95214 131 aa15.68■□□□□ 0.1
PTPRF-207ENST00000436724 HNRNPA3P51991 378 aaKnown RBP15.67■□□□□ 0.1
PTPRF-207ENST00000436724 SPINK13Q1W4C9 94 aa15.67■□□□□ 0.1
PTPRF-207ENST00000436724 OR10AG1Q8NH19 301 aa15.67■□□□□ 0.1
PTPRF-207ENST00000436724 ZNF256Q9Y2P7 627 aaPredicted RBP15.67■□□□□ 0.1
PTPRF-207ENST00000436724 TRAV12-3A0A0B4J271 114 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 C20orf202A1L168 122 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 SPRY2O43597 315 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 CNFNQ9BYD5 112 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 TIMM8BQ9Y5J9 83 aaPredicted RBP15.66■□□□□ 0.1
PTPRF-207ENST00000436724 H3BVH4 76 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 DMRTA1Q5VZB9 504 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 ZNF493Q6ZR52 646 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 AMN1Q8IY45 258 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 MAP6D1Q9H9H5 199 aa15.66■□□□□ 0.1
PTPRF-207ENST00000436724 TRAV2A0A0B4J234 112 aa15.65■□□□□ 0.1
PTPRF-207ENST00000436724 CYSRT1A8MQ03 144 aa15.65■□□□□ 0.1
PTPRF-207ENST00000436724 GNRH2O43555 120 aa15.65■□□□□ 0.1
PTPRF-207ENST00000436724 OR5AL1P0C617 328 aa15.65■□□□□ 0.1
PTPRF-207ENST00000436724 TSPOP30536 169 aa15.65■□□□□ 0.1
PTPRF-207ENST00000436724 LAMTOR2Q9Y2Q5 125 aa15.65■□□□□ 0.1
PTPRF-207ENST00000436724 SPAG8Q99932 426 aaPredicted RBP15.65■□□□□ 0.1
PTPRF-207ENST00000436724 VWFP04275 2813 aa15.64■□□□□ 0.09
PTPRF-207ENST00000436724 OR4C46A6NHA9 309 aa15.64■□□□□ 0.09
PTPRF-207ENST00000436724 SAP30O75446 220 aa15.64■□□□□ 0.09
PTPRF-207ENST00000436724 FXYD7P58549 80 aa15.64■□□□□ 0.09
PTPRF-207ENST00000436724 AMTNQ6UX39 209 aa15.64■□□□□ 0.09
PTPRF-207ENST00000436724 SIGLEC8Q9NYZ4 499 aa15.64■□□□□ 0.09
PTPRF-207ENST00000436724 TEP1Q99973 2627 aaKnown RBP15.64■□□□□ 0.09
PTPRF-207ENST00000436724 DUSP14O95147 198 aaKnown RBP15.63■□□□□ 0.09
PTPRF-207ENST00000436724 LEPP41159 167 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 COL5A1-AS1Q5SY13 56 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 STPG4Q8N801 248 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 ODF3Q96PU9 254 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 TMEM208Q9BTX3 173 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 C7orf71A4D174 169 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 CDKN1BP46527 198 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 NDUFA11Q86Y39 141 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.63■□□□□ 0.09
PTPRF-207ENST00000436724 MRPS16Q9Y3D3 137 aaKnown RBP15.63■□□□□ 0.09
PTPRF-207ENST00000436724 ATRQ13535 2644 aa15.63■□□□□ 0.09
PTPRF-207ENST00000436724 FAM104BQ5XKR9 115 aa15.62■□□□□ 0.09
PTPRF-207ENST00000436724 H3BMM0 161 aa15.62■□□□□ 0.09
PTPRF-207ENST00000436724 HLA-DRB4P13762 266 aa15.62■□□□□ 0.09
PTPRF-207ENST00000436724 HLA-DRB4X5D2U9 266 aa15.62■□□□□ 0.09
PTPRF-207ENST00000436724 SNAI2O43623 268 aa15.61■□□□□ 0.09
PTPRF-207ENST00000436724 S100A4P26447 101 aaKnown RBP15.61■□□□□ 0.09
PTPRF-207ENST00000436724 TRAV25A0A0B4J276 109 aa15.6■□□□□ 0.09
PTPRF-207ENST00000436724 RBMY1BA6NDE4 496 aaKnown RBP15.6■□□□□ 0.09
PTPRF-207ENST00000436724 RBMY1EA6NEQ0 496 aaKnown RBP15.6■□□□□ 0.09
PTPRF-207ENST00000436724 DLEU1O43261 78 aa15.6■□□□□ 0.09
PTPRF-207ENST00000436724 RBMY1DP0C7P1 496 aaKnown RBP15.6■□□□□ 0.09
PTPRF-207ENST00000436724 ODF3L2Q3SX64 289 aa15.6■□□□□ 0.09
PTPRF-207ENST00000436724 U3KQK5 164 aa15.6■□□□□ 0.09
PTPRF-207ENST00000436724 ASIPP42127 132 aa15.6■□□□□ 0.09
PTPRF-207ENST00000436724 FAM159AQ6UWV7 190 aa15.6■□□□□ 0.09
PTPRF-207ENST00000436724 MCRIP2Q9BUT9 160 aaKnown RBP15.6■□□□□ 0.09
PTPRF-207ENST00000436724 MAP1LC3CQ9BXW4 147 aa15.6■□□□□ 0.09
PTPRF-207ENST00000436724 SPANXN1Q5VSR9 72 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 PET117Q6UWS5 81 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 TMEM191AQ9H0A3 160 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 AP5S1Q9NUS5 200 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 hDV102S1A0JD36 115 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 D6R8Y8 96 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 RNASE3P12724 160 aaKnown RBP15.59■□□□□ 0.09
PTPRF-207ENST00000436724 EVI2AP22794 236 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 MRPL51Q4U2R6 128 aaKnown RBP15.59■□□□□ 0.09
PTPRF-207ENST00000436724 PRSS3P2Q8NHM4 247 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 HSPB8Q9UJY1 196 aa15.59■□□□□ 0.09
PTPRF-207ENST00000436724 SMKR1H3BMG3 65 aa15.58■□□□□ 0.08
PTPRF-207ENST00000436724 M0R381 172 aa15.58■□□□□ 0.08
PTPRF-207ENST00000436724 PF4P02776 101 aa15.58■□□□□ 0.08
PTPRF-207ENST00000436724 IFI27P40305 119 aaPredicted RBP15.58■□□□□ 0.08
PTPRF-207ENST00000436724 GAGE1Q13065 139 aa15.58■□□□□ 0.08
PTPRF-207ENST00000436724 RNF185Q96GF1 192 aa15.58■□□□□ 0.08
PTPRF-207ENST00000436724 ST20Q9HBF5 79 aa15.58■□□□□ 0.08
PTPRF-207ENST00000436724 CD7P09564 240 aa15.57■□□□□ 0.08
PTPRF-207ENST00000436724 FA2HQ7L5A8 372 aa15.57■□□□□ 0.08
PTPRF-207ENST00000436724 ZNF747Q9BV97 191 aa15.57■□□□□ 0.08
PTPRF-207ENST00000436724 IGLV1-51P01701 117 aa15.56■□□□□ 0.08
PTPRF-207ENST00000436724 RBMY1A1P0DJD3 496 aaKnown RBP15.56■□□□□ 0.08
PTPRF-207ENST00000436724 RBMY1CP0DJD4 496 aa15.56■□□□□ 0.08
PTPRF-207ENST00000436724 HINT1P49773 126 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-207ENST00000436724 RBMY1FQ15415 496 aaKnown RBP15.56■□□□□ 0.08
PTPRF-207ENST00000436724 A8MTW9 85 aa15.56■□□□□ 0.08
PTPRF-207ENST00000436724 GAS8-AS1O95177 125 aa15.56■□□□□ 0.08
PTPRF-207ENST00000436724 NCR2O95944 276 aa15.56■□□□□ 0.08
PTPRF-207ENST00000436724 TP73-AS1Q9UF72 201 aa15.56■□□□□ 0.08
PTPRF-207ENST00000436724 PHLDA3Q9Y5J5 127 aa15.56■□□□□ 0.08
PTPRF-207ENST00000436724 MUC4Q99102 2169 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms