RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SCRT2Q9NQ03 307 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 PHLDA3Q9Y5J5 127 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 IGLV11-55A0A075B6I3 123 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 TRAV40A0A0B4J280 105 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 K7ERJ3 54 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 TSPAN13O95857 204 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 PAX2Q02962 417 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 EEF1AKMT3Q96AZ1 226 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 PSMG3-AS1Q96PY0 264 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 RNF5Q99942 180 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 IGHV7-81A0A0B4J1V7 117 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 Q6ZQT7 251 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 STHQ8IWL8 128 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 HIST1H4GQ99525 98 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 TNFRSF13BO14836 293 aaPredicted RBP6.25□□□□□ -1.41
HPS4-205ENST00000429411 RNASE4P34096 147 aaKnown RBP6.25□□□□□ -1.41
HPS4-205ENST00000429411 ZNF415Q09FC8 603 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 LINC01559Q495D7 138 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 LINC01545Q5VT33 79 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 JKAMPQ9P055 326 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 FBN2P35556 2912 aa6.25□□□□□ -1.41
HPS4-205ENST00000429411 A0A0G2JLM5 398 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 F6UB75 175 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 CD5LO43866 347 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 FABP2P12104 132 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 GAGE5Q13069 117 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 GAGE6Q13070 117 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 PDE6HQ13956 83 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 NEGR1Q7Z3B1 354 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 C14orf178Q8N769 122 aaPredicted RBP6.24□□□□□ -1.41
HPS4-205ENST00000429411 OR2K2Q8NGT1 345 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 DTX2Q86UW9 622 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 DEFB125Q8N687 156 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 OR10J6PQ8NGY7 276 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 AGPAT4-IT1Q9H0P7 198 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 A8MZ25 164 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 NPIPB6E9PJ23 425 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
HPS4-205ENST00000429411 WI2-2373I1.2A0A1W2PRP0 233 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 G3V4G9 280 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 IGKCP01834 107 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.41
HPS4-205ENST00000429411 M0R1W7 72 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 SMIM13P0DJ93 91 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 OR11H6Q8NGC7 330 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 HOXB4P17483 251 aaPredicted RBP6.23□□□□□ -1.41
HPS4-205ENST00000429411 PAX8Q06710 450 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 C8orf86Q6ZUL3 223 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 Q8N9W7 124 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 SCGB3A1Q96QR1 104 aa6.23□□□□□ -1.41
HPS4-205ENST00000429411 HSD52Q0P140 79 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 MRAPQ8TCY5 172 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 MRPL35Q9NZE8 188 aaKnown RBP6.22□□□□□ -1.41
HPS4-205ENST00000429411 LOC107984156A0A0G2JMH3 177 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 LY6LH3BQJ8 138 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 DPM2O94777 84 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 IGF1P05019 195 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 SEC11AP67812 179 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 ARL17AQ8IVW1 177 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 TTC9CQ8N5M4 171 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 NXT2Q9NPJ8 142 aaKnown RBP6.22□□□□□ -1.41
HPS4-205ENST00000429411 SMAD5-AS1Q9Y6J3 95 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 TRAV41A0A0B4J266 112 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 OTOGQ6ZRI0 2925 aa6.22□□□□□ -1.41
HPS4-205ENST00000429411 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.21□□□□□ -1.42
HPS4-205ENST00000429411 H7C2G1 150 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 NPFFO15130 113 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 LGALS9BQ3B8N2 356 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 SAMD5Q5TGI4 173 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 LGALS9CQ6DKI2 356 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 NPBQ8NG41 125 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 SLC50A1Q9BRV3 221 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 CYSLTR1Q9Y271 337 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 AGRNO00468 2067 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 H3BUX3 64 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 BUB3O43684 328 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 CD300EQ496F6 205 aaPredicted RBP6.21□□□□□ -1.42
HPS4-205ENST00000429411 CHAC1Q9BUX1 264 aa6.21□□□□□ -1.42
HPS4-205ENST00000429411 ZNF256Q9Y2P7 627 aaPredicted RBP6.21□□□□□ -1.42
HPS4-205ENST00000429411 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 CENPVL3A0A0U1RRI6 287 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 CRXO43186 299 aaPredicted RBP6.2□□□□□ -1.42
HPS4-205ENST00000429411 APOMO95445 188 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 TRBV12-3P01733 135 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 MGAM2Q2M2H8 2515 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 A0A087WWL8 130 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 LAGE3Q14657 143 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 MINOS1Q5TGZ0 78 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 AMTNQ6UX39 209 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 C2orf91Q6ZV80 131 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 CCL19Q99731 98 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 MINOS1-NBL1R4GNA1 71 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 ATP5LO75964 103 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 ASIPP42127 132 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms