RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 OR51M1Q9H341 326 aa8.84□□□□□ -0.99
VEGFB-202ENST00000426086 RBFOX3A6NFN3 312 aa8.83□□□□□ -1
VEGFB-202ENST00000426086 MBP02144 154 aa8.83□□□□□ -1
VEGFB-202ENST00000426086 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
VEGFB-202ENST00000426086 ATP6V0CP27449 155 aa8.83□□□□□ -1
VEGFB-202ENST00000426086 EIF5AP63241 154 aaKnown RBP8.83□□□□□ -1
VEGFB-202ENST00000426086 TMUB2Q71RG4 321 aa8.83□□□□□ -1
VEGFB-202ENST00000426086 KANTRA0A1W2PQU2 76 aa8.82□□□□□ -1
VEGFB-202ENST00000426086 RBAKDNA6NC62 111 aa8.82□□□□□ -1
VEGFB-202ENST00000426086 FBLL1A6NHQ2 334 aaKnown RBP8.82□□□□□ -1
VEGFB-202ENST00000426086 BCL2L11O43521 198 aa8.82□□□□□ -1
VEGFB-202ENST00000426086 RANP62826 216 aaKnown RBP8.82□□□□□ -1
VEGFB-202ENST00000426086 ZFP69Q49AA0 526 aa8.82□□□□□ -1
VEGFB-202ENST00000426086 ATP6V0E2Q8NHE4 81 aa8.82□□□□□ -1
VEGFB-202ENST00000426086 TVP23CQ96ET8 276 aa8.82□□□□□ -1
VEGFB-202ENST00000426086 GTSF1LQ9H1H1 148 aa8.82□□□□□ -1
VEGFB-202ENST00000426086 RS1O15537 224 aa8.81□□□□□ -1
VEGFB-202ENST00000426086 SEC11BP0C7V7 166 aa8.81□□□□□ -1
VEGFB-202ENST00000426086 ACOT6Q3I5F7 207 aaPredicted RBP8.81□□□□□ -1
VEGFB-202ENST00000426086 FFAR4Q5NUL3 377 aa8.81□□□□□ -1
VEGFB-202ENST00000426086 CFAP126Q5VTH2 177 aa8.81□□□□□ -1
VEGFB-202ENST00000426086 HSD17B11Q8NBQ5 300 aa8.81□□□□□ -1
VEGFB-202ENST00000426086 PRADC1Q9BSG0 188 aa8.81□□□□□ -1
VEGFB-202ENST00000426086 PAXXQ9BUH6 204 aa8.81□□□□□ -1
VEGFB-202ENST00000426086 Q9UF83 564 aa8.81□□□□□ -1
VEGFB-202ENST00000426086 TRAV8-3A0A0A6YYJ7 113 aa8.8□□□□□ -1
VEGFB-202ENST00000426086 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
VEGFB-202ENST00000426086 DIRC3C9JPN6 131 aa8.8□□□□□ -1
VEGFB-202ENST00000426086 F6UZH7 168 aa8.8□□□□□ -1
VEGFB-202ENST00000426086 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
VEGFB-202ENST00000426086 RHOHQ15669 191 aa8.8□□□□□ -1
VEGFB-202ENST00000426086 C9orf62Q8N4C0 152 aa8.8□□□□□ -1
VEGFB-202ENST00000426086 STOML3Q8TAV4 291 aa8.8□□□□□ -1
VEGFB-202ENST00000426086 PFDN1O60925 122 aa8.79□□□□□ -1
VEGFB-202ENST00000426086 EIF3GO75821 320 aaKnown RBP eCLIP8.79□□□□□ -1
VEGFB-202ENST00000426086 SLC51BQ86UW2 128 aa8.79□□□□□ -1
VEGFB-202ENST00000426086 ZNF471Q9BX82 626 aaPredicted RBP8.79□□□□□ -1
VEGFB-202ENST00000426086 LENEPQ9Y5L5 61 aa8.79□□□□□ -1
VEGFB-202ENST00000426086 LINC00694P0DN24 101 aa8.78□□□□□ -1
VEGFB-202ENST00000426086 TPT1P13693 172 aaKnown RBP8.78□□□□□ -1
VEGFB-202ENST00000426086 CSN1S1P47710 185 aa8.78□□□□□ -1
VEGFB-202ENST00000426086 ZNF876PQ49A33 203 aa8.78□□□□□ -1
VEGFB-202ENST00000426086 EIF5AL1Q6IS14 154 aaKnown RBP8.78□□□□□ -1
VEGFB-202ENST00000426086 OR10G9Q8NGN4 311 aa8.78□□□□□ -1
VEGFB-202ENST00000426086 OR10G7Q8NGN6 311 aa8.78□□□□□ -1
VEGFB-202ENST00000426086 C11orf21Q9P2W6 132 aa8.78□□□□□ -1
VEGFB-202ENST00000426086 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
VEGFB-202ENST00000426086 TRAV8-1A0A0A6YYK1 113 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 A0A1W2PPV4 95 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 PGPEP1LA6NFU8 196 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 UMAD1C9J7I0 102 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 OR7C2O60412 319 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 TAS2R45P59539 299 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 GAGE1Q13065 139 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 GAGE4Q13068 117 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 GAGE5Q13069 117 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 Q8N976 141 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 SH3BGRL3Q9H299 93 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 RPH3ALQ9UNE2 315 aa8.77□□□□□ -1.01
VEGFB-202ENST00000426086 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
VEGFB-202ENST00000426086 IGKV2D-24A0A075B6R9 120 aa8.76□□□□□ -1.01
VEGFB-202ENST00000426086 TRAV21A0A0B4J279 112 aa8.76□□□□□ -1.01
VEGFB-202ENST00000426086 IGLV2-11P01706 119 aa8.76□□□□□ -1.01
VEGFB-202ENST00000426086 ZNF506Q5JVG8 444 aa8.76□□□□□ -1.01
VEGFB-202ENST00000426086 PQLC2Q6ZP29 291 aa8.76□□□□□ -1.01
VEGFB-202ENST00000426086 ACTR3CQ9C0K3 210 aaPredicted RBP8.76□□□□□ -1.01
VEGFB-202ENST00000426086 SDF2L1Q9HCN8 221 aa8.76□□□□□ -1.01
VEGFB-202ENST00000426086 GGTLC3B5MD39 225 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 STAG3L2P0CL84 134 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 STAG3L3P0CL85 134 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 RAB5CP51148 216 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 ZNF80P51504 273 aaPredicted RBP8.75□□□□□ -1.01
VEGFB-202ENST00000426086 RAB2AP61019 212 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 UBE2L3P68036 154 aaKnown RBP8.75□□□□□ -1.01
VEGFB-202ENST00000426086 KHDC3LQ587J8 217 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 AKR1C8PQ5T2L2 129 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 TMEM75Q8N9X5 138 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 SUN5Q8TC36 379 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 TMED6Q8WW62 240 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 RAB24Q969Q5 203 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 SGK494Q96LW2 274 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 C9orf85Q96MD7 179 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 SAMD10Q9BYL1 202 aa8.75□□□□□ -1.01
VEGFB-202ENST00000426086 CDC34P49427 236 aaPredicted RBP8.74□□□□□ -1.01
VEGFB-202ENST00000426086 TOR2AQ5JU69 321 aa8.74□□□□□ -1.01
VEGFB-202ENST00000426086 GOLT1AQ6ZVE7 132 aa8.74□□□□□ -1.01
VEGFB-202ENST00000426086 TREM1Q9NP99 234 aa8.74□□□□□ -1.01
VEGFB-202ENST00000426086 KLK12Q9UKR0 248 aa8.74□□□□□ -1.01
VEGFB-202ENST00000426086 CTXND1A0A1B0GTU2 59 aa8.73□□□□□ -1.01
VEGFB-202ENST00000426086 PGPA6NDG6 321 aa8.73□□□□□ -1.01
VEGFB-202ENST00000426086 PANO1I0J062 215 aa8.73□□□□□ -1.01
VEGFB-202ENST00000426086 MGST1P10620 155 aaKnown RBP8.73□□□□□ -1.01
VEGFB-202ENST00000426086 RNASE3P12724 160 aaKnown RBP8.73□□□□□ -1.01
VEGFB-202ENST00000426086 GNG5P63218 68 aa8.73□□□□□ -1.01
VEGFB-202ENST00000426086 ODF1Q14990 250 aa8.73□□□□□ -1.01
VEGFB-202ENST00000426086 MBD3L1Q8WWY6 194 aa8.73□□□□□ -1.01
VEGFB-202ENST00000426086 KCNS1Q96KK3 526 aa8.73□□□□□ -1.01
VEGFB-202ENST00000426086 COX11Q9Y6N1 276 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms