RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SCRT2Q9NQ03 307 aa17.22■□□□□ 0.35
VEGFA-209ENST00000425836 IGHV3-53P01767 116 aa17.21■□□□□ 0.35
VEGFA-209ENST00000425836 FAM74A3Q4VXF1 159 aa17.21■□□□□ 0.35
VEGFA-209ENST00000425836 TMEM88Q6PEY1 159 aa17.21■□□□□ 0.35
VEGFA-209ENST00000425836 POM121L12Q8N7R1 296 aa17.21■□□□□ 0.35
VEGFA-209ENST00000425836 OR2D3Q8NGH3 330 aa17.21■□□□□ 0.35
VEGFA-209ENST00000425836 FAM210BQ96KR6 192 aa17.21■□□□□ 0.35
VEGFA-209ENST00000425836 LINC01551Q86U37 167 aa17.2■□□□□ 0.34
VEGFA-209ENST00000425836 RNASE7Q9H1E1 156 aaKnown RBP17.2■□□□□ 0.34
VEGFA-209ENST00000425836 APLNQ9ULZ1 77 aa17.2■□□□□ 0.34
VEGFA-209ENST00000425836 TCTAP57738 103 aa17.19■□□□□ 0.34
VEGFA-209ENST00000425836 TMEM241Q24JQ0 296 aa17.19■□□□□ 0.34
VEGFA-209ENST00000425836 ZNF479Q96JC4 524 aa17.19■□□□□ 0.34
VEGFA-209ENST00000425836 NDUFAF3Q9BU61 184 aa17.19■□□□□ 0.34
VEGFA-209ENST00000425836 TRAV4A0A0B4J268 109 aa17.18■□□□□ 0.34
VEGFA-209ENST00000425836 SFTA3P0C7M3 94 aa17.18■□□□□ 0.34
VEGFA-209ENST00000425836 MED14OSP0DP75 135 aa17.18■□□□□ 0.34
VEGFA-209ENST00000425836 RPS20P60866 119 aaKnown RBP17.18■□□□□ 0.34
VEGFA-209ENST00000425836 SOHLH1Q5JUK2 328 aa17.18■□□□□ 0.34
VEGFA-209ENST00000425836 PHLDA3Q9Y5J5 127 aa17.18■□□□□ 0.34
VEGFA-209ENST00000425836 GZMBP10144 247 aa17.17■□□□□ 0.34
VEGFA-209ENST00000425836 DMRTA1Q5VZB9 504 aa17.17■□□□□ 0.34
VEGFA-209ENST00000425836 OR4C5Q8NGB2 326 aa17.17■□□□□ 0.34
VEGFA-209ENST00000425836 SSBP4Q9BWG4 385 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-209ENST00000425836 FHL2Q14192 279 aa17.16■□□□□ 0.34
VEGFA-209ENST00000425836 PIK3CD-AS1Q5SR53 167 aa17.16■□□□□ 0.34
VEGFA-209ENST00000425836 FAM231DQ6ZW35 169 aa17.16■□□□□ 0.34
VEGFA-209ENST00000425836 RS1O15537 224 aa17.15■□□□□ 0.34
VEGFA-209ENST00000425836 SNAI2O43623 268 aa17.15■□□□□ 0.34
VEGFA-209ENST00000425836 CFAP126Q5VTH2 177 aa17.15■□□□□ 0.34
VEGFA-209ENST00000425836 RPP21Q9H633 154 aaKnown RBP17.15■□□□□ 0.34
VEGFA-209ENST00000425836 NAT8Q9UHE5 227 aa17.15■□□□□ 0.34
VEGFA-209ENST00000425836 TRAV26-1A0A087WT03 109 aa17.15■□□□□ 0.34
VEGFA-209ENST00000425836 OR5AL1P0C617 328 aa17.15■□□□□ 0.34
VEGFA-209ENST00000425836 SYT8Q8NBV8 401 aa17.15■□□□□ 0.34
VEGFA-209ENST00000425836 TENM2Q9NT68 2774 aa17.14■□□□□ 0.33
VEGFA-209ENST00000425836 XKRY2A2RUG3 117 aa17.14■□□□□ 0.33
VEGFA-209ENST00000425836 RPL23P62829 140 aaKnown RBP17.14■□□□□ 0.33
VEGFA-209ENST00000425836 MUC4Q99102 2169 aa17.14■□□□□ 0.33
VEGFA-209ENST00000425836 A0A0J9YY99 117 aa17.13■□□□□ 0.33
VEGFA-209ENST00000425836 M0R381 172 aa17.13■□□□□ 0.33
VEGFA-209ENST00000425836 IGLC6P0CF74 106 aa17.13■□□□□ 0.33
VEGFA-209ENST00000425836 ERVFC1-1P60608 527 aa17.13■□□□□ 0.33
VEGFA-209ENST00000425836 ZFP82Q8N141 532 aa17.13■□□□□ 0.33
VEGFA-209ENST00000425836 OR10AG1Q8NH19 301 aa17.13■□□□□ 0.33
VEGFA-209ENST00000425836 TRGV4A0A0C4DH28 118 aa17.12■□□□□ 0.33
VEGFA-209ENST00000425836 GATCO43716 136 aaKnown RBP17.12■□□□□ 0.33
VEGFA-209ENST00000425836 FER1L6-AS1Q8NA97 138 aa17.12■□□□□ 0.33
VEGFA-209ENST00000425836 VSIG2Q96IQ7 327 aa17.12■□□□□ 0.33
VEGFA-209ENST00000425836 JPT2Q9H910 190 aa17.12■□□□□ 0.33
VEGFA-209ENST00000425836 MUC21A0A0G2JKD1 596 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 MUC21A0A140T8X8 626 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 C15orf53Q8NAA6 179 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 ISOC2Q96AB3 205 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 PRO0255Q9UI72 69 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 HHLA3Q9XRX5 114 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 A8MWV9 139 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 NXPH4O95158 308 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 SLAQ13239 276 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 TPPP3Q9BW30 176 aa17.11■□□□□ 0.33
VEGFA-209ENST00000425836 CRYBA4P53673 196 aa17.1■□□□□ 0.33
VEGFA-209ENST00000425836 ADIRFQ15847 76 aa17.1■□□□□ 0.33
VEGFA-209ENST00000425836 SAMD10Q9BYL1 202 aa17.1■□□□□ 0.33
VEGFA-209ENST00000425836 OSTCQ9NRP0 149 aa17.1■□□□□ 0.33
VEGFA-209ENST00000425836 KMT2CQ8NEZ4 4911 aaKnown RBP17.09■□□□□ 0.33
VEGFA-209ENST00000425836 H3BNG1 76 aa17.09■□□□□ 0.33
VEGFA-209ENST00000425836 CIDEAO60543 219 aa17.09■□□□□ 0.33
VEGFA-209ENST00000425836 UQCC3Q6UW78 93 aa17.09■□□□□ 0.33
VEGFA-209ENST00000425836 SFRP2Q96HF1 295 aa17.09■□□□□ 0.33
VEGFA-209ENST00000425836 IGHV3-73A0A0B4J1V6 119 aa17.08■□□□□ 0.32
VEGFA-209ENST00000425836 PAX4O43316 350 aa17.08■□□□□ 0.32
VEGFA-209ENST00000425836 NUDT3O95989 172 aa17.08■□□□□ 0.32
VEGFA-209ENST00000425836 SPANXN1Q5VSR9 72 aa17.08■□□□□ 0.32
VEGFA-209ENST00000425836 LCE6AA0A183 80 aa17.07■□□□□ 0.32
VEGFA-209ENST00000425836 A0A1W2PPQ1 181 aa17.07■□□□□ 0.32
VEGFA-209ENST00000425836 LINC00862A6NCI5 91 aa17.07■□□□□ 0.32
VEGFA-209ENST00000425836 GATA1P15976 413 aaPredicted RBP17.07■□□□□ 0.32
VEGFA-209ENST00000425836 SSTP61278 116 aa17.07■□□□□ 0.32
VEGFA-209ENST00000425836 CT83Q5H943 113 aa17.07■□□□□ 0.32
VEGFA-209ENST00000425836 UFSP1Q6NVU6 142 aa17.07■□□□□ 0.32
VEGFA-209ENST00000425836 LYZL1Q6UWQ5 148 aa17.07■□□□□ 0.32
VEGFA-209ENST00000425836 COMMD7Q86VX2 200 aa17.07■□□□□ 0.32
VEGFA-209ENST00000425836 F2Z2F3 143 aa17.06■□□□□ 0.32
VEGFA-209ENST00000425836 ZFP2Q6ZN57 461 aa17.06■□□□□ 0.32
VEGFA-209ENST00000425836 GTSF1Q8WW33 167 aa17.06■□□□□ 0.32
VEGFA-209ENST00000425836 LINC00476Q8WZB0 136 aa17.06■□□□□ 0.32
VEGFA-209ENST00000425836 SACSQ9NZJ4 4579 aa17.06■□□□□ 0.32
VEGFA-209ENST00000425836 A8MWL6 223 aa17.06■□□□□ 0.32
VEGFA-209ENST00000425836 C15orf54Q8N8G6 183 aa17.06■□□□□ 0.32
VEGFA-209ENST00000425836 CRYGDP07320 174 aa17.05■□□□□ 0.32
VEGFA-209ENST00000425836 LGALS9CQ6DKI2 356 aa17.05■□□□□ 0.32
VEGFA-209ENST00000425836 V9GYV3 84 aa17.05■□□□□ 0.32
VEGFA-209ENST00000425836 DNAH1Q9P2D7 4330 aa17.05■□□□□ 0.32
VEGFA-209ENST00000425836 A0A087WWL8 130 aa17.04■□□□□ 0.32
VEGFA-209ENST00000425836 CACNG7P62955 275 aa17.04■□□□□ 0.32
VEGFA-209ENST00000425836 ALMS1Q8TCU4 4167 aa17.03■□□□□ 0.32
VEGFA-209ENST00000425836 LY6G6CO95867 125 aa17.03■□□□□ 0.32
VEGFA-209ENST00000425836 CTRLP40313 264 aa17.03■□□□□ 0.32
VEGFA-209ENST00000425836 OR10G8Q8NGN5 311 aa17.03■□□□□ 0.32
VEGFA-209ENST00000425836 TMEM218A2RU14 115 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms