RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 K7EQD1 137 aa8.72□□□□□ -1.01
SGCE-203ENST00000425444 BCL2L11O43521 198 aa8.72□□□□□ -1.01
SGCE-203ENST00000425444 PFDN1O60925 122 aa8.72□□□□□ -1.01
SGCE-203ENST00000425444 S100A4P26447 101 aaKnown RBP8.72□□□□□ -1.01
SGCE-203ENST00000425444 FHITP49789 147 aa8.72□□□□□ -1.01
SGCE-203ENST00000425444 CST9LP1Q5W188 147 aa8.72□□□□□ -1.01
SGCE-203ENST00000425444 OR11H4Q8NGC9 324 aa8.72□□□□□ -1.01
SGCE-203ENST00000425444 FAM213BQ8TBF2 198 aa8.72□□□□□ -1.01
SGCE-203ENST00000425444 A0A1B0GV50 99 aa8.71□□□□□ -1.02
SGCE-203ENST00000425444 SEC11BP0C7V7 166 aa8.71□□□□□ -1.02
SGCE-203ENST00000425444 KRTAP10-2P60368 255 aa8.71□□□□□ -1.02
SGCE-203ENST00000425444 EIF5AP63241 154 aaKnown RBP8.71□□□□□ -1.02
SGCE-203ENST00000425444 LYPD5Q6UWN5 251 aa8.71□□□□□ -1.02
SGCE-203ENST00000425444 NHLRC2Q8NBF2 726 aa8.71□□□□□ -1.02
SGCE-203ENST00000425444 FRZBQ92765 325 aa8.71□□□□□ -1.02
SGCE-203ENST00000425444 TXNDC17Q9BRA2 123 aa8.71□□□□□ -1.02
SGCE-203ENST00000425444 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
SGCE-203ENST00000425444 UMAD1C9J7I0 102 aa8.7□□□□□ -1.02
SGCE-203ENST00000425444 SFT2D1Q8WV19 159 aa8.7□□□□□ -1.02
SGCE-203ENST00000425444 FMC1Q96HJ9 113 aa8.7□□□□□ -1.02
SGCE-203ENST00000425444 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
SGCE-203ENST00000425444 TCEAL7Q9BRU2 100 aa8.7□□□□□ -1.02
SGCE-203ENST00000425444 IGHV3-73A0A0B4J1V6 119 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 IGKV3D-20A0A0C4DH25 116 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 LOC100131303A0A0U1RQF7 123 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 B4DEV8 164 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 RS1O15537 224 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 RNASE3P12724 160 aaKnown RBP8.69□□□□□ -1.02
SGCE-203ENST00000425444 GATA1P15976 413 aaPredicted RBP8.69□□□□□ -1.02
SGCE-203ENST00000425444 ASIPP42127 132 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 AKR1C3P42330 323 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 LINC00315P59091 139 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 ZNF506Q5JVG8 444 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 ZFP30Q9Y2G7 519 aa8.69□□□□□ -1.02
SGCE-203ENST00000425444 PGPEP1LA6NFU8 196 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 M0R036 132 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 CIDEAO60543 219 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 PAGE4O60829 102 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 SH2D1AO60880 128 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 TPT1P13693 172 aaKnown RBP8.68□□□□□ -1.02
SGCE-203ENST00000425444 BTF3P20290 206 aaKnown RBP8.68□□□□□ -1.02
SGCE-203ENST00000425444 RHOHQ15669 191 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 FAM162BQ5T6X4 162 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 DPPA3Q6W0C5 159 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 TMUB2Q71RG4 321 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 ZC2HC1AQ96GY0 325 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 PRADC1Q9BSG0 188 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 LY96Q9Y6Y9 160 aa8.68□□□□□ -1.02
SGCE-203ENST00000425444 TRAV9-2A0A087WT02 112 aa8.67□□□□□ -1.02
SGCE-203ENST00000425444 H3BVH4 76 aa8.67□□□□□ -1.02
SGCE-203ENST00000425444 LGALSLQ3ZCW2 172 aaPredicted RBP8.67□□□□□ -1.02
SGCE-203ENST00000425444 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
SGCE-203ENST00000425444 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
SGCE-203ENST00000425444 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
SGCE-203ENST00000425444 MBD3L1Q8WWY6 194 aa8.67□□□□□ -1.02
SGCE-203ENST00000425444 TMSB15BA0A087X1C1 80 aa8.66□□□□□ -1.02
SGCE-203ENST00000425444 TRBV6-4A0A1B0GX49 114 aa8.66□□□□□ -1.02
SGCE-203ENST00000425444 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
SGCE-203ENST00000425444 MGST1P10620 155 aaKnown RBP8.66□□□□□ -1.02
SGCE-203ENST00000425444 EVI2AP22794 236 aa8.66□□□□□ -1.02
SGCE-203ENST00000425444 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
SGCE-203ENST00000425444 PTH2Q96A98 100 aa8.66□□□□□ -1.02
SGCE-203ENST00000425444 IL36BQ9NZH7 164 aa8.66□□□□□ -1.02
SGCE-203ENST00000425444 TRBV6-1A0A0K0K1D8 114 aa8.65□□□□□ -1.02
SGCE-203ENST00000425444 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
SGCE-203ENST00000425444 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
SGCE-203ENST00000425444 A8MWV9 139 aa8.65□□□□□ -1.02
SGCE-203ENST00000425444 KRBOX1C9JBD0 128 aa8.65□□□□□ -1.02
SGCE-203ENST00000425444 LTAP01374 205 aa8.65□□□□□ -1.02
SGCE-203ENST00000425444 CRIP1P50238 77 aa8.65□□□□□ -1.02
SGCE-203ENST00000425444 PARLQ9H300 379 aa8.65□□□□□ -1.02
SGCE-203ENST00000425444 XGP55808 180 aa8.64□□□□□ -1.03
SGCE-203ENST00000425444 EIF5AL1Q6IS14 154 aaKnown RBP8.64□□□□□ -1.03
SGCE-203ENST00000425444 COX8CQ7Z4L0 72 aa8.64□□□□□ -1.03
SGCE-203ENST00000425444 NFE4Q86UQ8 179 aa8.64□□□□□ -1.03
SGCE-203ENST00000425444 PHLDA3Q9Y5J5 127 aa8.64□□□□□ -1.03
SGCE-203ENST00000425444 RNF213Q63HN8 5207 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 S100A9P06702 114 aaKnown RBP8.63□□□□□ -1.03
SGCE-203ENST00000425444 CRYGDP07320 174 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 ARMS2P0C7Q2 107 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 ZNF674Q2M3X9 581 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 OR10J3Q5JRS4 329 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 PIK3CD-AS1Q5SR53 167 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 ZFP2Q6ZN57 461 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 GNG13Q9P2W3 67 aa8.63□□□□□ -1.03
SGCE-203ENST00000425444 TEX46H3BTG2 121 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 K7EP13 123 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 M0R381 172 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 EREGO14944 169 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
SGCE-203ENST00000425444 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 RAB5CP51148 216 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 TIRAPP58753 221 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 ERVFC1-1P60608 527 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 SERTAD4-AS1Q5TG53 156 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 FAM74A4Q5TZK3 123 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms