RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 AZU1P20160 251 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 PLNP26678 52 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 CKS2P33552 79 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 IFI27P40305 119 aaPredicted RBP1.88□□□□□ -2.11
VPS41-206ENST00000418457 NMUP48645 174 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 RAB9AP51151 201 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 CKS1BP61024 79 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 RPL32P62910 135 aaKnown RBP1.88□□□□□ -2.11
VPS41-206ENST00000418457 MRPL51Q4U2R6 128 aaKnown RBP1.88□□□□□ -2.11
VPS41-206ENST00000418457 C9orf129Q5T035 196 aaKnown RBP1.88□□□□□ -2.11
VPS41-206ENST00000418457 LYZL1Q6UWQ5 148 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 LINC00322Q6ZN03 302 aaPredicted RBP1.88□□□□□ -2.11
VPS41-206ENST00000418457 GOLT1AQ6ZVE7 132 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 CEND1Q8N111 149 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 TTC9CQ8N5M4 171 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 Q8N8P6 123 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 CNEP1R1Q8N9A8 125 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 OR11H6Q8NGC7 330 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 LEAP2Q969E1 77 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 RAB37Q96AX2 223 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 ZC2HC1AQ96GY0 325 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 CNFNQ9BYD5 112 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 DEFB127Q9H1M4 99 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 YAE1D1Q9NRH1 226 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 SPANXB1Q9NS25 103 aaPredicted RBP1.88□□□□□ -2.11
VPS41-206ENST00000418457 MRPL16Q9NX20 251 aaKnown RBP1.88□□□□□ -2.11
VPS41-206ENST00000418457 KAAG1Q9UBP8 84 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 CELA1Q9UNI1 258 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 CYSLTR1Q9Y271 337 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 HILPDAQ9Y5L2 63 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 INSIG2Q9Y5U4 225 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 DNAJC13O75165 2243 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 DSCAMO60469 2012 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 PRR14LQ5THK1 2151 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 CNTRLQ7Z7A1 2325 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 BRWD1Q9NSI6 2320 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 ATRXP46100 2492 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 PCNX2A6NKB5 2137 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 FREM2Q5SZK8 3169 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 TRBV20-1A0A075B6N2 111 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 TRBV25-1A0A075B6N4 114 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 PPIAL4EA0A075B759 164 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 A0A087WX48 190 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 TRAV25A0A0B4J276 109 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 WI2-2373I1.2A0A1W2PRP0 233 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 FABP5P3A8MUU1 101 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 OR11H12B2RN74 326 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.87□□□□□ -2.11
VPS41-206ENST00000418457 M0QXV9 152 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 M0R1B8 84 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 LAMA5O15230 3695 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 GNG7O60262 68 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 SH2D1AO60880 128 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 APOMO95445 188 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 IGHV1-46P01743 117 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 TFF1P04155 84 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 CRYGBP07316 175 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 IGLC6P0CF74 106 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 PPIAL4FP0DN26 164 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 SLC25A16P16260 332 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 RPL7P18124 248 aaKnown RBP1.87□□□□□ -2.11
VPS41-206ENST00000418457 ZNF138P52744 262 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 FXYD2P54710 66 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 SMAGPQ0VAQ4 97 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 KLRD1Q13241 179 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 PRR4Q16378 134 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 RRN3P1Q2M238 152 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 C12orf74Q32Q52 190 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 IGFL2Q6UWQ7 119 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 PPP1R27Q86WC6 154 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 AMN1Q8IY45 258 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 FAM216BQ8N7L0 139 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 NBEAQ8NFP9 2946 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 OR11H1Q8NG94 326 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 OR11H2Q8NH07 326 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 MYOZ3Q8TDC0 251 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 ZNF418Q8TF45 676 aaPredicted RBP1.87□□□□□ -2.11
VPS41-206ENST00000418457 CCL13Q99616 98 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 SPANXDQ9BXN6 97 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 GTSF1LQ9H1H1 148 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 TMEM133Q9H2Q1 129 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 NHP2Q9NX24 153 aaKnown RBP1.87□□□□□ -2.11
VPS41-206ENST00000418457 TP73-AS1Q9UF72 201 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 HHLA3Q9XRX5 114 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 SIGLEC9Q9Y336 463 aa1.87□□□□□ -2.11
VPS41-206ENST00000418457 TIMM8BQ9Y5J9 83 aaPredicted RBP1.87□□□□□ -2.11
VPS41-206ENST00000418457 TSSC4Q9Y5U2 329 aaPredicted RBP1.87□□□□□ -2.11
VPS41-206ENST00000418457 HEATR1Q9H583 2144 aaKnown RBP1.87□□□□□ -2.11
VPS41-206ENST00000418457 TNCP24821 2201 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 LAMA1P25391 3075 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 ITPR1Q14643 2758 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 TRBV7-3A0A075B6L6 115 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 TRAV8-1A0A0A6YYK1 113 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 MYMXA0A1B0GTQ4 84 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 LOC389332A0A1B0GUA5 103 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 TMEM213A2RRL7 107 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 E7EUB6 86 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 F8VRH5 84 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 H7C1H1 209 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 I3L2K1 104 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms