RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 ATP6V0BQ99437 205 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 NAV3Q8IVL0 2385 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 F8VRH5 84 aa12.15□□□□□ -0.46
PHRF1-203ENST00000416188 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.46
PHRF1-203ENST00000416188 Q8N9W7 124 aa12.15□□□□□ -0.46
PHRF1-203ENST00000416188 DENND4AQ7Z401 1863 aa12.15□□□□□ -0.46
PHRF1-203ENST00000416188 KIAA1549LQ6ZVL6 1849 aa12.15□□□□□ -0.46
PHRF1-203ENST00000416188 NACAE9PAV3 2078 aa12.15□□□□□ -0.46
PHRF1-203ENST00000416188 C10orf142B7Z368 130 aa12.15□□□□□ -0.46
PHRF1-203ENST00000416188 AJUBAQ96IF1 538 aa12.15□□□□□ -0.46
PHRF1-203ENST00000416188 COX8AP10176 69 aa12.14□□□□□ -0.47
PHRF1-203ENST00000416188 PLA2G2EQ9NZK7 142 aa12.14□□□□□ -0.47
PHRF1-203ENST00000416188 PYGO2Q9BRQ0 406 aa12.14□□□□□ -0.47
PHRF1-203ENST00000416188 MRPL53Q96EL3 112 aaKnown RBP12.13□□□□□ -0.47
PHRF1-203ENST00000416188 SMAD5-AS1Q9Y6J3 95 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 IGHV4OR15-8A0A075B7B6 117 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 A0A087WW49 117 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 CDK2AP2O75956 126 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 MORN5Q5VZ52 161 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 CFHR4Q92496 578 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 RITA1Q96K30 269 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 IGF2BP2-AS1Q96M15 143 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 DKK2Q9UBU2 259 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 DSCAMO60469 2012 aa12.13□□□□□ -0.47
PHRF1-203ENST00000416188 ANKRD11Q6UB99 2663 aaPredicted RBP12.12□□□□□ -0.47
PHRF1-203ENST00000416188 C20orf78Q9BR46 151 aa12.12□□□□□ -0.47
PHRF1-203ENST00000416188 APRG1Q8IVJ8 170 aa12.12□□□□□ -0.47
PHRF1-203ENST00000416188 IGKV1-17P01599 117 aa12.12□□□□□ -0.47
PHRF1-203ENST00000416188 ANGP03950 147 aaKnown RBP12.12□□□□□ -0.47
PHRF1-203ENST00000416188 FOXI2Q6ZQN5 318 aa12.12□□□□□ -0.47
PHRF1-203ENST00000416188 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
PHRF1-203ENST00000416188 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 ETDBQ3ZM63 59 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 CLPSL2Q6UWE3 100 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 IGLV1-47P01700 117 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 SPINK8P0C7L1 97 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 K7EIM0 57 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 FGF6P10767 208 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 SHISA2Q6UWI4 295 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 CHD3Q12873 2000 aaKnown RBP12.11□□□□□ -0.47
PHRF1-203ENST00000416188 J3QQQ9 107 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 Q6ZVH6 145 aa12.11□□□□□ -0.47
PHRF1-203ENST00000416188 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
PHRF1-203ENST00000416188 C9orf118A6NHY6 69 aa12.1□□□□□ -0.47
PHRF1-203ENST00000416188 LYPD6Q86Y78 171 aa12.1□□□□□ -0.47
PHRF1-203ENST00000416188 SORL1Q92673 2214 aa12.1□□□□□ -0.47
PHRF1-203ENST00000416188 A6NDX4 124 aa12.1□□□□□ -0.47
PHRF1-203ENST00000416188 IGHG2P01859 326 aa12.1□□□□□ -0.47
PHRF1-203ENST00000416188 GATA1P15976 413 aaPredicted RBP12.1□□□□□ -0.47
PHRF1-203ENST00000416188 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
PHRF1-203ENST00000416188 U3KQE9 123 aa12.1□□□□□ -0.47
PHRF1-203ENST00000416188 TRBV20-1A0A075B6N2 111 aa12.1□□□□□ -0.47
PHRF1-203ENST00000416188 I3L2K1 104 aa12.1□□□□□ -0.47
PHRF1-203ENST00000416188 Q6ZSR3 168 aa12.09□□□□□ -0.47
PHRF1-203ENST00000416188 NKAPP1Q8N9T2 125 aa12.09□□□□□ -0.47
PHRF1-203ENST00000416188 WIPF2Q8TF74 440 aaPredicted RBP12.09□□□□□ -0.47
PHRF1-203ENST00000416188 BVES-AS1Q5T3Y7 98 aa12.09□□□□□ -0.47
PHRF1-203ENST00000416188 C4orf3Q8WVX3 66 aa12.09□□□□□ -0.47
PHRF1-203ENST00000416188 TNRC6AQ8NDV7 1962 aaKnown RBP12.08□□□□□ -0.47
PHRF1-203ENST00000416188 PATE2Q6UY27 113 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 A0A0J9YY99 117 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 PRSS29PA6NIE9 313 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 H3BMM0 161 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 Q6YL49 198 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 UBE2WQ96B02 151 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 ZNF462Q96JM2 2506 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 ZNF747Q9BV97 191 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 PRO1854Q9UHT4 67 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 JMJD1CQ15652 2540 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 CTSGP08311 255 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 CGB3P0DN86 165 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 CDSNQ15517 529 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 C11orf71Q6IPW1 123 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 EDA2RQ9HAV5 297 aa12.08□□□□□ -0.48
PHRF1-203ENST00000416188 SOCS3O14543 225 aa12.07□□□□□ -0.48
PHRF1-203ENST00000416188 KLF5Q13887 457 aaPredicted RBP12.07□□□□□ -0.48
PHRF1-203ENST00000416188 LENEPQ9Y5L5 61 aa12.07□□□□□ -0.48
PHRF1-203ENST00000416188 IGLV11-55A0A075B6I3 123 aa12.07□□□□□ -0.48
PHRF1-203ENST00000416188 ZNF493Q6ZR52 646 aa12.07□□□□□ -0.48
PHRF1-203ENST00000416188 K7ERJ3 54 aa12.07□□□□□ -0.48
PHRF1-203ENST00000416188 HERVK_113P63121 156 aa12.07□□□□□ -0.48
PHRF1-203ENST00000416188 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
PHRF1-203ENST00000416188 INSL3P51460 131 aa12.07□□□□□ -0.48
PHRF1-203ENST00000416188 PRR14LQ5THK1 2151 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 TMEM89A2RUT3 159 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 TMEM126AQ9H061 195 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
PHRF1-203ENST00000416188 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
PHRF1-203ENST00000416188 RBAKDNA6NC62 111 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 NUPR1O60356 82 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 INAFM2P0DMQ5 153 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 RHOHQ15669 191 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 IGLV2-23P01705 113 aa12.06□□□□□ -0.48
PHRF1-203ENST00000416188 SCRT2Q9NQ03 307 aa12.05□□□□□ -0.48
PHRF1-203ENST00000416188 MUC22E2RYF6 1773 aaPredicted RBP12.05□□□□□ -0.48
PHRF1-203ENST00000416188 RMI2Q96E14 147 aa12.05□□□□□ -0.48
PHRF1-203ENST00000416188 MSRB1Q9NZV6 116 aa12.05□□□□□ -0.48
PHRF1-203ENST00000416188 KRTAP10-9P60411 292 aa12.05□□□□□ -0.48
PHRF1-203ENST00000416188 CEND1Q8N111 149 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms