RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
UBXN4-202ENST00000415164 PRNTQ86SH4 94 aa12.8□□□□□ -0.36
UBXN4-202ENST00000415164 C9orf85Q96MD7 179 aa12.8□□□□□ -0.36
UBXN4-202ENST00000415164 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
UBXN4-202ENST00000415164 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
UBXN4-202ENST00000415164 TRAV8-3A0A0A6YYJ7 113 aa12.79□□□□□ -0.36
UBXN4-202ENST00000415164 S100A4P26447 101 aaKnown RBP12.79□□□□□ -0.36
UBXN4-202ENST00000415164 LGALSLQ3ZCW2 172 aaPredicted RBP12.79□□□□□ -0.36
UBXN4-202ENST00000415164 ARL6IP6Q8N6S5 226 aa12.79□□□□□ -0.36
UBXN4-202ENST00000415164 OR2T35Q8NGX2 323 aa12.79□□□□□ -0.36
UBXN4-202ENST00000415164 S100ZQ8WXG8 99 aa12.79□□□□□ -0.36
UBXN4-202ENST00000415164 BAALCQ8WXS3 180 aa12.79□□□□□ -0.36
UBXN4-202ENST00000415164 SERTM2A0A1B0GWG4 89 aa12.78□□□□□ -0.36
UBXN4-202ENST00000415164 GGTLC3B5MD39 225 aa12.78□□□□□ -0.36
UBXN4-202ENST00000415164 TCRAP04437 139 aa12.78□□□□□ -0.36
UBXN4-202ENST00000415164 CDC34P49427 236 aaPredicted RBP12.78□□□□□ -0.36
UBXN4-202ENST00000415164 SMUG1Q53HV7 270 aa12.78□□□□□ -0.36
UBXN4-202ENST00000415164 TOR2AQ5JU69 321 aa12.78□□□□□ -0.36
UBXN4-202ENST00000415164 C5orf17Q8NAS9 161 aa12.78□□□□□ -0.36
UBXN4-202ENST00000415164 DEFB104AQ8WTQ1 72 aa12.78□□□□□ -0.36
UBXN4-202ENST00000415164 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.37
UBXN4-202ENST00000415164 RNASE3P12724 160 aaKnown RBP12.77□□□□□ -0.37
UBXN4-202ENST00000415164 SH3BGRL3Q9H299 93 aa12.77□□□□□ -0.37
UBXN4-202ENST00000415164 PARLQ9H300 379 aa12.77□□□□□ -0.37
UBXN4-202ENST00000415164 UPK1BO75841 260 aa12.76□□□□□ -0.37
UBXN4-202ENST00000415164 FLI1Q01543 452 aaPredicted RBP12.76□□□□□ -0.37
UBXN4-202ENST00000415164 URGCP-MRPS24S4R325 110 aa12.76□□□□□ -0.37
UBXN4-202ENST00000415164 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
UBXN4-202ENST00000415164 KRTAP29-1A8MX34 341 aaPredicted RBP12.75□□□□□ -0.37
UBXN4-202ENST00000415164 SUMO1P63165 101 aaKnown RBP12.75□□□□□ -0.37
UBXN4-202ENST00000415164 Q6ZSA8 131 aa12.75□□□□□ -0.37
UBXN4-202ENST00000415164 SCXQ7RTU7 201 aa12.75□□□□□ -0.37
UBXN4-202ENST00000415164 HSD17B11Q8NBQ5 300 aa12.75□□□□□ -0.37
UBXN4-202ENST00000415164 GCHFRP30047 84 aa12.74□□□□□ -0.37
UBXN4-202ENST00000415164 RMI2Q96E14 147 aa12.74□□□□□ -0.37
UBXN4-202ENST00000415164 SAMD10Q9BYL1 202 aa12.74□□□□□ -0.37
UBXN4-202ENST00000415164 JPT2Q9H910 190 aa12.74□□□□□ -0.37
UBXN4-202ENST00000415164 A8MWV9 139 aa12.73□□□□□ -0.37
UBXN4-202ENST00000415164 STAG3L2P0CL84 134 aa12.73□□□□□ -0.37
UBXN4-202ENST00000415164 STAG3L3P0CL85 134 aa12.73□□□□□ -0.37
UBXN4-202ENST00000415164 ASIPP42127 132 aa12.73□□□□□ -0.37
UBXN4-202ENST00000415164 C14orf178Q8N769 122 aaPredicted RBP12.73□□□□□ -0.37
UBXN4-202ENST00000415164 CYB561D1Q8N8Q1 229 aa12.73□□□□□ -0.37
UBXN4-202ENST00000415164 RAB24Q969Q5 203 aa12.73□□□□□ -0.37
UBXN4-202ENST00000415164 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
UBXN4-202ENST00000415164 IGLV2-11P01706 119 aa12.72□□□□□ -0.37
UBXN4-202ENST00000415164 IFITM3Q01628 133 aa12.72□□□□□ -0.37
UBXN4-202ENST00000415164 ZFP2Q6ZN57 461 aa12.72□□□□□ -0.37
UBXN4-202ENST00000415164 PTH2Q96A98 100 aa12.72□□□□□ -0.37
UBXN4-202ENST00000415164 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
UBXN4-202ENST00000415164 Q9UF83 564 aa12.72□□□□□ -0.37
UBXN4-202ENST00000415164 COX11Q9Y6N1 276 aa12.72□□□□□ -0.37
UBXN4-202ENST00000415164 A0A087WWC5 75 aa12.71□□□□□ -0.37
UBXN4-202ENST00000415164 TRAV34A0A0B4J273 112 aa12.71□□□□□ -0.37
UBXN4-202ENST00000415164 SAPCD1Q5SSQ6 148 aa12.71□□□□□ -0.37
UBXN4-202ENST00000415164 FAM74A4Q5TZK3 123 aa12.71□□□□□ -0.37
UBXN4-202ENST00000415164 KLK12Q9UKR0 248 aa12.71□□□□□ -0.37
UBXN4-202ENST00000415164 IGKV3D-20A0A0C4DH25 116 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 H3BVH4 76 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 LINC00694P0DN24 101 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 FGF8P55075 233 aaPredicted RBP12.7□□□□□ -0.38
UBXN4-202ENST00000415164 KCNIP4Q6PIL6 250 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 LINC00299Q6ZSB3 139 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 Q8N976 141 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 UBE2WQ96B02 151 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 LINC00479Q96M42 142 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 MARVELD1Q9BSK0 173 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 TMEM167BQ9NRX6 74 aa12.7□□□□□ -0.38
UBXN4-202ENST00000415164 SYT8Q8NBV8 401 aa12.69□□□□□ -0.38
UBXN4-202ENST00000415164 ARL2-SNX15V9GYD0 113 aa12.69□□□□□ -0.38
UBXN4-202ENST00000415164 HMCN2Q8NDA2 5059 aa12.69□□□□□ -0.38
UBXN4-202ENST00000415164 LRP1Q07954 4544 aaKnown RBP12.69□□□□□ -0.38
UBXN4-202ENST00000415164 A0A087WX48 190 aa12.68□□□□□ -0.38
UBXN4-202ENST00000415164 B4DEV8 164 aa12.68□□□□□ -0.38
UBXN4-202ENST00000415164 CXorf1O96002 111 aa12.68□□□□□ -0.38
UBXN4-202ENST00000415164 IFNA7P01567 189 aa12.68□□□□□ -0.38
UBXN4-202ENST00000415164 FAT3Q8TDW7 4589 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 FABP5P3A8MUU1 101 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 M0R036 132 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 SEC11BP0C7V7 166 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 ATP6V0CP27449 155 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 DMRTA1Q5VZB9 504 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 NIT1Q86X76 327 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 OR2G3Q8NGZ4 309 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 CHAC1Q9BUX1 264 aa12.67□□□□□ -0.38
UBXN4-202ENST00000415164 ACTR3CQ9C0K3 210 aaPredicted RBP12.67□□□□□ -0.38
UBXN4-202ENST00000415164 A0A087WWL8 130 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 GRIFINA4D1Z8 144 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 MBP02144 154 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 DEFA1P59665 94 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 DEFA3P59666 94 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 UBE2G2P60604 165 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 SERTAD4-AS1Q5TG53 156 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 OR11H4Q8NGC9 324 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
UBXN4-202ENST00000415164 RNF222A6NCQ9 220 aa12.65□□□□□ -0.38
UBXN4-202ENST00000415164 RHODO00212 210 aa12.65□□□□□ -0.38
UBXN4-202ENST00000415164 IGLV2-8P01709 118 aa12.65□□□□□ -0.38
UBXN4-202ENST00000415164 CIRBP-AS1Q8TBR5 109 aa12.65□□□□□ -0.38
UBXN4-202ENST00000415164 PSMG3Q9BT73 122 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms