RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TOR2AQ5JU69 321 aa11.06□□□□□ -0.64
MRPL55-220ENST00000411464 PQLC2Q6ZP29 291 aa11.06□□□□□ -0.64
MRPL55-220ENST00000411464 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.05□□□□□ -0.64
MRPL55-220ENST00000411464 RPL12P30050 165 aaKnown RBP11.05□□□□□ -0.64
MRPL55-220ENST00000411464 GNG5P63218 68 aa11.05□□□□□ -0.64
MRPL55-220ENST00000411464 SERTAD4-AS1Q5TG53 156 aa11.05□□□□□ -0.64
MRPL55-220ENST00000411464 TCTE3Q8IZS6 198 aa11.05□□□□□ -0.64
MRPL55-220ENST00000411464 SGK494Q96LW2 274 aa11.05□□□□□ -0.64
MRPL55-220ENST00000411464 HSPB11Q9Y547 144 aa11.05□□□□□ -0.64
MRPL55-220ENST00000411464 ACOT6Q3I5F7 207 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-220ENST00000411464 ZNF506Q5JVG8 444 aa11.04□□□□□ -0.64
MRPL55-220ENST00000411464 Q8N3U1 123 aa11.04□□□□□ -0.64
MRPL55-220ENST00000411464 SYT8Q8NBV8 401 aa11.04□□□□□ -0.64
MRPL55-220ENST00000411464 PTH2Q96A98 100 aa11.04□□□□□ -0.64
MRPL55-220ENST00000411464 SMIM3Q9BZL3 60 aa11.04□□□□□ -0.64
MRPL55-220ENST00000411464 TNFSF18Q9UNG2 199 aa11.04□□□□□ -0.64
MRPL55-220ENST00000411464 COX11Q9Y6N1 276 aa11.04□□□□□ -0.64
MRPL55-220ENST00000411464 SERTM2A0A1B0GWG4 89 aa11.03□□□□□ -0.64
MRPL55-220ENST00000411464 PGPEP1LA6NFU8 196 aa11.03□□□□□ -0.64
MRPL55-220ENST00000411464 GGTLC3B5MD39 225 aa11.03□□□□□ -0.64
MRPL55-220ENST00000411464 K7EQM0 130 aa11.03□□□□□ -0.64
MRPL55-220ENST00000411464 OR11H4Q8NGC9 324 aa11.03□□□□□ -0.64
MRPL55-220ENST00000411464 BAALCQ8WXS3 180 aa11.03□□□□□ -0.64
MRPL55-220ENST00000411464 C9orf85Q96MD7 179 aa11.03□□□□□ -0.64
MRPL55-220ENST00000411464 C11orf21Q9P2W6 132 aa11.03□□□□□ -0.64
MRPL55-220ENST00000411464 GAGE12JA6NER3 117 aa11.02□□□□□ -0.65
MRPL55-220ENST00000411464 RBFOX3A6NFN3 312 aa11.02□□□□□ -0.65
MRPL55-220ENST00000411464 GCGP01275 180 aa11.02□□□□□ -0.65
MRPL55-220ENST00000411464 ZNF80P51504 273 aaPredicted RBP11.02□□□□□ -0.65
MRPL55-220ENST00000411464 GAGE1Q13065 139 aa11.02□□□□□ -0.65
MRPL55-220ENST00000411464 GAGE4Q13068 117 aa11.02□□□□□ -0.65
MRPL55-220ENST00000411464 GAGE5Q13069 117 aa11.02□□□□□ -0.65
MRPL55-220ENST00000411464 GAGE13Q4V321 117 aa11.02□□□□□ -0.65
MRPL55-220ENST00000411464 DAZ4Q86SG3 579 aaKnown RBP11.02□□□□□ -0.65
MRPL55-220ENST00000411464 AQP10Q96PS8 301 aa11.02□□□□□ -0.65
MRPL55-220ENST00000411464 DAZ3Q9NR90 486 aaKnown RBP11.02□□□□□ -0.65
MRPL55-220ENST00000411464 A0A087WWC5 75 aa11.01□□□□□ -0.65
MRPL55-220ENST00000411464 RNF222A6NCQ9 220 aa11.01□□□□□ -0.65
MRPL55-220ENST00000411464 HMGB3O15347 200 aaKnown RBP11.01□□□□□ -0.65
MRPL55-220ENST00000411464 ARPC5O15511 151 aa11.01□□□□□ -0.65
MRPL55-220ENST00000411464 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
MRPL55-220ENST00000411464 LINC01620Q4KN68 170 aa11.01□□□□□ -0.65
MRPL55-220ENST00000411464 SCXQ7RTU7 201 aa11.01□□□□□ -0.65
MRPL55-220ENST00000411464 Q8N976 141 aa11.01□□□□□ -0.65
MRPL55-220ENST00000411464 INO80EQ8NBZ0 244 aaPredicted RBP11.01□□□□□ -0.65
MRPL55-220ENST00000411464 RMI2Q96E14 147 aa11.01□□□□□ -0.65
MRPL55-220ENST00000411464 TCRAP04437 139 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 RAB2AP61019 212 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 SMUG1Q53HV7 270 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 ZFP2Q6ZN57 461 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 TMEM75Q8N9X5 138 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 C5orf17Q8NAS9 161 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 OR10G9Q8NGN4 311 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 OR10G7Q8NGN6 311 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 PSG8Q9UQ74 426 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 URGCP-MRPS24S4R325 110 aa11□□□□□ -0.65
MRPL55-220ENST00000411464 HMSDA8MTL9 139 aa10.99□□□□□ -0.65
MRPL55-220ENST00000411464 A8MWV9 139 aa10.99□□□□□ -0.65
MRPL55-220ENST00000411464 RNASE3P12724 160 aaKnown RBP10.99□□□□□ -0.65
MRPL55-220ENST00000411464 CYB561D1Q8N8Q1 229 aa10.99□□□□□ -0.65
MRPL55-220ENST00000411464 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
MRPL55-220ENST00000411464 PARLQ9H300 379 aa10.99□□□□□ -0.65
MRPL55-220ENST00000411464 WFDC1Q9HC57 220 aa10.99□□□□□ -0.65
MRPL55-220ENST00000411464 SEC11BP0C7V7 166 aa10.98□□□□□ -0.65
MRPL55-220ENST00000411464 ARL14EPLP0DKL9 152 aa10.98□□□□□ -0.65
MRPL55-220ENST00000411464 S100A4P26447 101 aaKnown RBP10.98□□□□□ -0.65
MRPL55-220ENST00000411464 FGF8P55075 233 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-220ENST00000411464 FLI1Q01543 452 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-220ENST00000411464 LGALSLQ3ZCW2 172 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-220ENST00000411464 PRNTQ86SH4 94 aa10.98□□□□□ -0.65
MRPL55-220ENST00000411464 IGKV2D-24A0A075B6R9 120 aa10.97□□□□□ -0.65
MRPL55-220ENST00000411464 PFDN1O60925 122 aa10.97□□□□□ -0.65
MRPL55-220ENST00000411464 OXTP01178 125 aa10.97□□□□□ -0.65
MRPL55-220ENST00000411464 PIK3CD-AS1Q5SR53 167 aa10.97□□□□□ -0.65
MRPL55-220ENST00000411464 SAPCD1Q5SSQ6 148 aa10.97□□□□□ -0.65
MRPL55-220ENST00000411464 LINC00694P0DN24 101 aa10.96□□□□□ -0.65
MRPL55-220ENST00000411464 CDC34P49427 236 aaPredicted RBP10.96□□□□□ -0.65
MRPL55-220ENST00000411464 SUMO1P63165 101 aaKnown RBP10.96□□□□□ -0.65
MRPL55-220ENST00000411464 KCNRGQ8N5I3 272 aa10.96□□□□□ -0.65
MRPL55-220ENST00000411464 IGLV2-11P01706 119 aa10.95□□□□□ -0.66
MRPL55-220ENST00000411464 GCHFRP30047 84 aa10.95□□□□□ -0.66
MRPL55-220ENST00000411464 ZNF345Q14585 488 aa10.95□□□□□ -0.66
MRPL55-220ENST00000411464 CIRBP-AS1Q8TBR5 109 aa10.95□□□□□ -0.66
MRPL55-220ENST00000411464 LINC00479Q96M42 142 aa10.95□□□□□ -0.66
MRPL55-220ENST00000411464 SAMD10Q9BYL1 202 aa10.95□□□□□ -0.66
MRPL55-220ENST00000411464 Q9UF83 564 aa10.95□□□□□ -0.66
MRPL55-220ENST00000411464 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
MRPL55-220ENST00000411464 A0A0D9SG52 128 aa10.94□□□□□ -0.66
MRPL55-220ENST00000411464 STAG3L2P0CL84 134 aa10.94□□□□□ -0.66
MRPL55-220ENST00000411464 STAG3L3P0CL85 134 aa10.94□□□□□ -0.66
MRPL55-220ENST00000411464 ASIPP42127 132 aa10.94□□□□□ -0.66
MRPL55-220ENST00000411464 C14orf178Q8N769 122 aaPredicted RBP10.94□□□□□ -0.66
MRPL55-220ENST00000411464 KLK12Q9UKR0 248 aa10.94□□□□□ -0.66
MRPL55-220ENST00000411464 A0A087WX48 190 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 IGKV3D-20A0A0C4DH25 116 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-220ENST00000411464 ELOBQ15370 118 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 RPL7L1Q6DKI1 246 aaKnown RBP10.93□□□□□ -0.66
MRPL55-220ENST00000411464 KCNIP4Q6PIL6 250 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 TMUB2Q71RG4 321 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms