RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ITPR3Q14573 2671 aa11.52□□□□□ -0.57
SCAMP4-202ENST00000409472 SMIM13P0DJ93 91 aa11.52□□□□□ -0.57
SCAMP4-202ENST00000409472 GATA3P23771 443 aa11.52□□□□□ -0.57
SCAMP4-202ENST00000409472 BRI3O95415 125 aa11.51□□□□□ -0.57
SCAMP4-202ENST00000409472 SIGLEC8Q9NYZ4 499 aa11.51□□□□□ -0.57
SCAMP4-202ENST00000409472 A0A096LNJ9 63 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 RPL11P62913 178 aaKnown RBP11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 C9orf47Q6ZRZ4 202 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 MRPL53Q96EL3 112 aaKnown RBP11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 PRELID3AQ96N28 172 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 SPANXB1Q9NS25 103 aaPredicted RBP11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 U3KQK5 164 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 CUBNO60494 3623 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 OR11H12B2RN74 326 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 NPYP01303 97 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 C9orf139Q6ZV77 190 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 OR11H1Q8NG94 326 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 OR11H2Q8NH07 326 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 RNF185Q96GF1 192 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 AKAP9Q99996 3911 aa11.5□□□□□ -0.57
SCAMP4-202ENST00000409472 SPRY2O43597 315 aa11.49□□□□□ -0.57
SCAMP4-202ENST00000409472 TSPAN13O95857 204 aa11.49□□□□□ -0.57
SCAMP4-202ENST00000409472 PSMB8P28062 276 aa11.49□□□□□ -0.57
SCAMP4-202ENST00000409472 RHPN1-AS1Q9BWJ2 59 aa11.49□□□□□ -0.57
SCAMP4-202ENST00000409472 AP5S1Q9NUS5 200 aa11.49□□□□□ -0.57
SCAMP4-202ENST00000409472 MYO9AB2RTY4 2548 aa11.49□□□□□ -0.57
SCAMP4-202ENST00000409472 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 SRSF2Q01130 221 aaKnown RBP11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 ORMDL3Q8N138 153 aa11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 PRSS3P2Q8NHM4 247 aa11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 ZNF747Q9BV97 191 aa11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 CNFNQ9BYD5 112 aa11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 SONP18583 2426 aaKnown RBP11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 GATA1P15976 413 aaPredicted RBP11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 DUX5Q96PT3 197 aa11.48□□□□□ -0.57
SCAMP4-202ENST00000409472 ZNF418Q8TF45 676 aaPredicted RBP11.47□□□□□ -0.57
SCAMP4-202ENST00000409472 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
SCAMP4-202ENST00000409472 CCDC168Q8NDH2 2452 aa11.47□□□□□ -0.57
SCAMP4-202ENST00000409472 FSHBP01225 129 aa11.47□□□□□ -0.57
SCAMP4-202ENST00000409472 CKS2P33552 79 aa11.47□□□□□ -0.57
SCAMP4-202ENST00000409472 ZFAND2AQ8N6M9 145 aa11.47□□□□□ -0.57
SCAMP4-202ENST00000409472 HIST2H2BCQ6DN03 193 aa11.46□□□□□ -0.57
SCAMP4-202ENST00000409472 BEX4Q9NWD9 120 aaPredicted RBP11.46□□□□□ -0.57
SCAMP4-202ENST00000409472 EVI2AP22794 236 aa11.46□□□□□ -0.58
SCAMP4-202ENST00000409472 ZNF479Q96JC4 524 aa11.46□□□□□ -0.58
SCAMP4-202ENST00000409472 SPAG8Q99932 426 aaPredicted RBP11.46□□□□□ -0.58
SCAMP4-202ENST00000409472 NF1P21359 2839 aa11.46□□□□□ -0.58
SCAMP4-202ENST00000409472 FLNAP21333 2647 aaKnown RBP11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 PRRC2AP48634 2157 aaKnown RBP11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 DEFB113Q30KQ7 82 aa11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 KRTAP1-3Q8IUG1 177 aa11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 H3BVH4 76 aa11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 J3QLI3 93 aa11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 HOXA3O43365 443 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 VPREB3Q9UKI3 123 aa11.45□□□□□ -0.58
SCAMP4-202ENST00000409472 HIST2H2BDQ6DRA6 164 aa11.44□□□□□ -0.58
SCAMP4-202ENST00000409472 Q96MF0 132 aa11.44□□□□□ -0.58
SCAMP4-202ENST00000409472 CYSLTR1Q9Y271 337 aa11.44□□□□□ -0.58
SCAMP4-202ENST00000409472 TRAV26-2A0A0B4J265 109 aa11.43□□□□□ -0.58
SCAMP4-202ENST00000409472 WFDC3Q8IUB2 231 aa11.43□□□□□ -0.58
SCAMP4-202ENST00000409472 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
SCAMP4-202ENST00000409472 PGPEP1Q9NXJ5 209 aa11.43□□□□□ -0.58
SCAMP4-202ENST00000409472 WFDC2Q14508 124 aa11.42□□□□□ -0.58
SCAMP4-202ENST00000409472 PSMG4Q5JS54 123 aa11.42□□□□□ -0.58
SCAMP4-202ENST00000409472 Q6YL49 198 aa11.42□□□□□ -0.58
SCAMP4-202ENST00000409472 OR10J6PQ8NGY7 276 aa11.42□□□□□ -0.58
SCAMP4-202ENST00000409472 OR8A1Q8NGG7 326 aa11.42□□□□□ -0.58
SCAMP4-202ENST00000409472 ZNF580Q9UK33 172 aa11.42□□□□□ -0.58
SCAMP4-202ENST00000409472 UFC1Q9Y3C8 167 aa11.42□□□□□ -0.58
SCAMP4-202ENST00000409472 HELZ2Q9BYK8 2649 aaKnown RBP11.42□□□□□ -0.58
SCAMP4-202ENST00000409472 GCSHP23434 173 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 DCANP1Q8TF63 244 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 FAM19A4Q96LR4 140 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 AGRNO00468 2067 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 ETDBQ3ZM63 59 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 C18orf65Q6ZTR6 163 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 HIGD1BQ9P298 99 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 ERG28Q9UKR5 140 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 SORL1Q92673 2214 aa11.41□□□□□ -0.58
SCAMP4-202ENST00000409472 OVOL1O14753 267 aa11.4□□□□□ -0.58
SCAMP4-202ENST00000409472 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
SCAMP4-202ENST00000409472 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
SCAMP4-202ENST00000409472 LINC00477Q96M19 166 aa11.4□□□□□ -0.58
SCAMP4-202ENST00000409472 IGHV4OR15-8A0A075B7B6 117 aa11.4□□□□□ -0.58
SCAMP4-202ENST00000409472 A0A087WW49 117 aa11.4□□□□□ -0.58
SCAMP4-202ENST00000409472 SPINK8P0C7L1 97 aa11.4□□□□□ -0.58
SCAMP4-202ENST00000409472 NMUP48645 174 aa11.4□□□□□ -0.58
SCAMP4-202ENST00000409472 PDZD2O15018 2839 aa11.4□□□□□ -0.59
SCAMP4-202ENST00000409472 ITPR2Q14571 2701 aa11.39□□□□□ -0.59
SCAMP4-202ENST00000409472 E9PLD3 99 aa11.39□□□□□ -0.59
SCAMP4-202ENST00000409472 SYNJ2BPP57105 145 aa11.39□□□□□ -0.59
SCAMP4-202ENST00000409472 DEFB136Q30KP8 78 aa11.39□□□□□ -0.59
SCAMP4-202ENST00000409472 ANXA2RQ3ZCQ2 193 aa11.39□□□□□ -0.59
SCAMP4-202ENST00000409472 GAGE13Q4V321 117 aa11.39□□□□□ -0.59
SCAMP4-202ENST00000409472 SPANXN1Q5VSR9 72 aa11.39□□□□□ -0.59
SCAMP4-202ENST00000409472 SS18L2Q9UHA2 77 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms