RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 MSRB1Q9NZV6 116 aa4.69□□□□□ -1.66
GTF3C3-202ENST00000409364 SELENOKQ9Y6D0 94 aa4.69□□□□□ -1.66
GTF3C3-202ENST00000409364 HIVEP2P31629 2446 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 C7orf71A4D174 169 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 HSBP1L1C9JCN9 74 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 TCF21O43680 179 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 LY6G6DO95868 133 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 CD33P20138 364 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 DEFB114Q30KQ6 69 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 TDRG1Q3Y452 100 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 ANXA2RQ3ZCQ2 193 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 PRR31Q5SQ13 230 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 CDPF1Q6NVV7 123 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 Q6ZQT7 251 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 FA2HQ7L5A8 372 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 OR10AG1Q8NH19 301 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 DYNLRB2Q8TF09 96 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 URB1-AS1Q96HZ7 61 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 RAX2Q96IS3 184 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 SCRT2Q9NQ03 307 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 AP5S1Q9NUS5 200 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 SIGLEC8Q9NYZ4 499 aa4.68□□□□□ -1.66
GTF3C3-202ENST00000409364 OR4C46A6NHA9 309 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 LEPROTL1O95214 131 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 C3orf79P0CE67 100 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 CD28P10747 220 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 CDKN1BP46527 198 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 PCP4P48539 62 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 FHL3Q13643 280 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 ZNF664Q8N3J9 261 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 RNF185Q96GF1 192 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 DUX3Q96PT4 197 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 SPAG8Q99932 426 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 PHLDA3Q9Y5J5 127 aa4.67□□□□□ -1.66
GTF3C3-202ENST00000409364 TRAV12-3A0A0B4J271 114 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 IGHV1-24A0A0C4DH33 117 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 A4D1N5 150 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 H3BVH4 76 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 GNRH2O43555 120 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 EVI2AP22794 236 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 CMC4P56277 68 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 DEFB131AP59861 70 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 KIR3DS1Q14943 382 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 PMCHL1Q16048 86 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 TEX43Q6ZNM6 134 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 TMEM61Q8N0U2 210 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 SMR3AQ99954 134 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 TMEM70Q9BUB7 260 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 NXT2Q9NPJ8 142 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 SETXQ7Z333 2677 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 LOC389332A0A1B0GUA5 103 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 A0A1W2PRX2 142 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 CRXO43186 299 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 TNFRSF6BO95407 300 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 HLA-DRB4P13762 266 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 IFI27P40305 119 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 CD300EQ496F6 205 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 DEFB125Q8N687 156 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 C11orf44Q8N8P7 122 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 MRAP2Q96G30 205 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 MAP1LC3CQ9BXW4 147 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 MAP1LC3AQ9H492 121 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 TIMM8BQ9Y5J9 83 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 HLA-DRB4X5D2U9 266 aa4.66□□□□□ -1.66
GTF3C3-202ENST00000409364 MTORP42345 2549 aa4.65□□□□□ -1.66
GTF3C3-202ENST00000409364 IGHV1OR15-1A0A075B7D0 117 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 C20orf202A1L168 122 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 LINC01546A6NGU7 62 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 A8MTW9 85 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 LINC00587B1AMM8 73 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 SMKR1H3BMG3 65 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 H3BMM0 161 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 M0R381 172 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 PPP1R17O96001 155 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 NPYP01303 97 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 IGKV3-20P01619 116 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 CD7P09564 240 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 RNASE3P12724 160 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 PROK1P58294 105 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 PET117Q6UWS5 81 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 AMTNQ6UX39 209 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 OR2K2Q8NGT1 345 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 VAMP8Q9BV40 100 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 PRO1933Q9H354 126 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 DPH3P1Q9H4G8 78 aa4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 ZNF469Q96JG9 3925 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-202ENST00000409364 OTOGQ6ZRI0 2925 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 KNCNA6PVL3 124 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 SYS1-DBNDD2H3BUS1 97 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 NXPH4O95158 308 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 SMIM17P0DL12 118 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 DDTP30046 118 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 SPINK13Q1W4C9 94 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 SPATA12Q7Z6I5 190 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 Q8N976 141 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 SYT8Q8NBV8 401 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 AP1S3Q96PC3 154 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 C20orf144Q9BQM9 153 aa4.64□□□□□ -1.67
GTF3C3-202ENST00000409364 ZNF256Q9Y2P7 627 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms