RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SH2D1AO60880 128 aa5.35□□□□□ -1.55
USP16-204ENST00000399976 CRIP1P50238 77 aa5.35□□□□□ -1.55
USP16-204ENST00000399976 ZNF80P51504 273 aaPredicted RBP5.35□□□□□ -1.55
USP16-204ENST00000399976 FXYD7P58549 80 aa5.35□□□□□ -1.55
USP16-204ENST00000399976 PARLQ9H300 379 aa5.35□□□□□ -1.55
USP16-204ENST00000399976 ZNF705GA8MUZ8 300 aaPredicted RBP5.34□□□□□ -1.55
USP16-204ENST00000399976 F2Z2F3 143 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 SNRPCP09234 159 aaKnown RBP5.34□□□□□ -1.55
USP16-204ENST00000399976 PNRC1Q12796 327 aaPredicted RBP5.34□□□□□ -1.55
USP16-204ENST00000399976 RPS10P5Q9NQ39 176 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 OSTCQ9NRP0 149 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 IGKV3D-20A0A0C4DH25 116 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 A0A1W2PPQ1 181 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 ATP5G1P05496 136 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 ASIPP42127 132 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 TIRAPP58753 221 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 CACNG7P62955 275 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 FAM222AQ5U5X8 452 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 RPH3ALQ9UNE2 315 aa5.34□□□□□ -1.55
USP16-204ENST00000399976 TRBV20OR9-2A0A075B6H5 130 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 A8MWV9 139 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 RHODO00212 210 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 RS1O15537 224 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 IGLC6P0CF74 106 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 AZU1P20160 251 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 KIR3DS1Q14943 382 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 SH2D6Q7Z4S9 175 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 ZNF575Q86XF7 245 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 ZFP82Q8N141 532 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 NAT8Q9UHE5 227 aa5.34□□□□□ -1.56
USP16-204ENST00000399976 TRAV26-1A0A087WT03 109 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 RNASE3P12724 160 aaKnown RBP5.33□□□□□ -1.56
USP16-204ENST00000399976 CTRLP40313 264 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 DAD1P61803 113 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 CASC10Q5T4H9 136 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 SYT8Q8NBV8 401 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 LINC00479Q96M42 142 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 EIF5A2Q9GZV4 153 aaKnown RBP5.33□□□□□ -1.56
USP16-204ENST00000399976 C11orf21Q9P2W6 132 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 TRAV34A0A0B4J273 112 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 IFITM10A6NMD0 228 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 PHOX2AO14813 284 aa5.33□□□□□ -1.56
USP16-204ENST00000399976 COA6Q5JTJ3 125 aaKnown RBP5.32□□□□□ -1.56
USP16-204ENST00000399976 LINC01551Q86U37 167 aa5.32□□□□□ -1.56
USP16-204ENST00000399976 POM121L12Q8N7R1 296 aa5.32□□□□□ -1.56
USP16-204ENST00000399976 PHLDA1Q8WV24 401 aaPredicted RBP5.32□□□□□ -1.56
USP16-204ENST00000399976 CELA1Q9UNI1 258 aa5.32□□□□□ -1.56
USP16-204ENST00000399976 SOHLH1Q5JUK2 328 aa5.32□□□□□ -1.56
USP16-204ENST00000399976 UFSP1Q6NVU6 142 aa5.32□□□□□ -1.56
USP16-204ENST00000399976 TRBV24-1A0A075B6N3 115 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 PPP1R2P9O14990 202 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 ORM1P02763 201 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 ELOBQ15370 118 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 TMEM241Q24JQ0 296 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 PYY3Q5JQD4 70 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 SFRP2Q96HF1 295 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 SMIM7Q9BQ49 75 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 DERL1Q9BUN8 251 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 RPP21Q9H633 154 aaKnown RBP5.31□□□□□ -1.56
USP16-204ENST00000399976 A0A1B0GW15 77 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 TRBV6-4A0A1B0GX49 114 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 RAB4BP61018 213 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 ISOC2Q96AB3 205 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 DAZAP1Q96EP5 407 aaKnown RBP5.31□□□□□ -1.56
USP16-204ENST00000399976 NACAE9PAV3 2078 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 ZNF727A8MUV8 499 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 K7EP13 123 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 P01737 135 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 PKIAP61925 76 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 LGALS9CQ6DKI2 356 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 GATD1Q8NB37 220 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 OCC1Q8TAD7 63 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 IMMP2LQ96T52 175 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 CTDSP1Q9GZU7 261 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 NOP10Q9NPE3 64 aaKnown RBP5.31□□□□□ -1.56
USP16-204ENST00000399976 APLNQ9ULZ1 77 aa5.31□□□□□ -1.56
USP16-204ENST00000399976 IGHV3OR16-12A0A075B7B8 117 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 DEFB131BA0A096LNP1 70 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 A8MWL6 223 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 K7EN84 100 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 LINC00694P0DN24 101 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 HIST3H2BBQ8N257 126 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 C2orf88Q9BSF0 95 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 TRAV9-1A0A075B6T8 112 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 M0R036 132 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 MGST1P10620 155 aaKnown RBP5.3□□□□□ -1.56
USP16-204ENST00000399976 S100A2P29034 98 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 Q6ZTC4 211 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 UPK3BQ9BT76 320 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 MDFICQ9P1T7 246 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 TENM3Q9P273 2699 aa5.3□□□□□ -1.56
USP16-204ENST00000399976 TRBV10-1A0A0K0K1A3 114 aa5.29□□□□□ -1.56
USP16-204ENST00000399976 A0A1B0GV50 99 aa5.29□□□□□ -1.56
USP16-204ENST00000399976 HIST1H2BKO60814 126 aa5.29□□□□□ -1.56
USP16-204ENST00000399976 HIST1H2BJP06899 126 aa5.29□□□□□ -1.56
USP16-204ENST00000399976 GATA1P15976 413 aaPredicted RBP5.29□□□□□ -1.56
USP16-204ENST00000399976 HIST1H2BOP23527 126 aa5.29□□□□□ -1.56
USP16-204ENST00000399976 HIST1H2BBP33778 126 aa5.29□□□□□ -1.56
USP16-204ENST00000399976 HIST1H2BDP58876 126 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms