RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ATP5LO75964 103 aa10.65□□□□□ -0.7
MKS1-203ENST00000393120 STPG4Q8N801 248 aa10.65□□□□□ -0.7
MKS1-203ENST00000393120 WFDC12Q8WWY7 111 aa10.65□□□□□ -0.7
MKS1-203ENST00000393120 RASL10AQ92737 203 aa10.65□□□□□ -0.7
MKS1-203ENST00000393120 KIF25-AS1Q9Y6Z4 181 aa10.65□□□□□ -0.7
MKS1-203ENST00000393120 SMIM17P0DL12 118 aa10.64□□□□□ -0.71
MKS1-203ENST00000393120 CDKN1BP46527 198 aa10.64□□□□□ -0.71
MKS1-203ENST00000393120 DUX5Q96PT3 197 aa10.64□□□□□ -0.71
MKS1-203ENST00000393120 ZMAT4Q9H898 229 aa10.64□□□□□ -0.71
MKS1-203ENST00000393120 PEMTQ9UBM1 199 aa10.64□□□□□ -0.71
MKS1-203ENST00000393120 EPG5Q9HCE0 2579 aa10.64□□□□□ -0.71
MKS1-203ENST00000393120 TRAV12-3A0A0B4J271 114 aa10.64□□□□□ -0.71
MKS1-203ENST00000393120 SUMO2P61956 95 aaKnown RBP10.64□□□□□ -0.71
MKS1-203ENST00000393120 MAP1AP78559 2803 aaPredicted RBP10.64□□□□□ -0.71
MKS1-203ENST00000393120 SPRY2O43597 315 aa10.63□□□□□ -0.71
MKS1-203ENST00000393120 SLURP1P55000 103 aa10.63□□□□□ -0.71
MKS1-203ENST00000393120 LINC00315P59091 139 aa10.63□□□□□ -0.71
MKS1-203ENST00000393120 C18orf65Q6ZTR6 163 aa10.63□□□□□ -0.71
MKS1-203ENST00000393120 C9orf85Q96MD7 179 aa10.63□□□□□ -0.71
MKS1-203ENST00000393120 IGHV3-16A0A0C4DH30 117 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 A8MTW9 85 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 CD7P09564 240 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 RPL32P62910 135 aaKnown RBP10.62□□□□□ -0.71
MKS1-203ENST00000393120 ODF1Q14990 250 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 ORMDL2Q53FV1 153 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 AMTNQ6UX39 209 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 OR11H1Q8NG94 326 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 C18orf15Q96N68 181 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 CSMD2Q7Z408 3487 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 PLA2G2AP14555 144 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 HINT1P49773 126 aaPredicted RBP10.62□□□□□ -0.71
MKS1-203ENST00000393120 Q6ZSV7 163 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 OR9G4Q8NGQ1 327 aa10.62□□□□□ -0.71
MKS1-203ENST00000393120 CREBBPQ92793 2442 aa10.61□□□□□ -0.71
MKS1-203ENST00000393120 J3QKU1 62 aa10.61□□□□□ -0.71
MKS1-203ENST00000393120 PRSS1P07477 247 aa10.61□□□□□ -0.71
MKS1-203ENST00000393120 DEFB136Q30KP8 78 aa10.61□□□□□ -0.71
MKS1-203ENST00000393120 ANKRD39Q53RE8 183 aa10.61□□□□□ -0.71
MKS1-203ENST00000393120 DKK2Q9UBU2 259 aa10.61□□□□□ -0.71
MKS1-203ENST00000393120 IGHV1OR15-1A0A075B7D0 117 aa10.6□□□□□ -0.71
MKS1-203ENST00000393120 DLEU1O43261 78 aa10.6□□□□□ -0.71
MKS1-203ENST00000393120 FGF6P10767 208 aa10.6□□□□□ -0.71
MKS1-203ENST00000393120 C12orf54Q6X4T0 127 aa10.6□□□□□ -0.71
MKS1-203ENST00000393120 DNAJC9-AS1A6NH13 148 aa10.6□□□□□ -0.71
MKS1-203ENST00000393120 MGPP08493 103 aa10.6□□□□□ -0.71
MKS1-203ENST00000393120 BOD1L2Q8IYS8 172 aa10.6□□□□□ -0.71
MKS1-203ENST00000393120 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
MKS1-203ENST00000393120 ZANQ9Y493 2812 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 ABCA12Q86UK0 2595 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 TRAV12-2A0A075B6T6 113 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 NUDT3O95989 172 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 IGKV3-20P01619 116 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 ZNF25P17030 456 aaPredicted RBP10.59□□□□□ -0.71
MKS1-203ENST00000393120 GAGE1Q13065 139 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 SPINK13Q1W4C9 94 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 FOXC2Q99958 501 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 TP73-AS1Q9UF72 201 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 HHLA3Q9XRX5 114 aa10.59□□□□□ -0.71
MKS1-203ENST00000393120 MPV17L2Q567V2 206 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 Q8N1Y9 231 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 SYT8Q8NBV8 401 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 DLX4Q92988 240 aaPredicted RBP10.58□□□□□ -0.72
MKS1-203ENST00000393120 TOMM6Q96B49 74 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 SIVA1O15304 175 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 KRTAP1-1Q07627 177 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 C2orf91Q6ZV80 131 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 KLHL30-AS1Q8NEE0 82 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 TMEM208Q9BTX3 173 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 MDFICQ9P1T7 246 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 CENPEQ02224 2701 aa10.58□□□□□ -0.72
MKS1-203ENST00000393120 TRAV12-1A0A0B4J245 112 aa10.57□□□□□ -0.72
MKS1-203ENST00000393120 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.57□□□□□ -0.72
MKS1-203ENST00000393120 IGKCP01834 107 aa10.57□□□□□ -0.72
MKS1-203ENST00000393120 BVES-AS1Q5T3Y7 98 aa10.57□□□□□ -0.72
MKS1-203ENST00000393120 HIST2H2BCQ6DN03 193 aa10.57□□□□□ -0.72
MKS1-203ENST00000393120 TRGV11A0A075B6L2 103 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 A0A087WX48 190 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 LINC01549A6NIU2 74 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 H3BMM0 161 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 DPM2O94777 84 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 G0S2P27469 103 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 DEFB131AP59861 70 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 DEFB114Q30KQ6 69 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 APCP25054 2843 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 DOPEY2Q9Y3R5 2298 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 POLR2KP53803 58 aaKnown RBP10.56□□□□□ -0.72
MKS1-203ENST00000393120 KHDC1LQ5JSQ8 128 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 SUMO4Q6EEV6 95 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 ORAOV1Q8WV07 137 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 JPT2Q9H910 190 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 ESM1Q9NQ30 184 aa10.56□□□□□ -0.72
MKS1-203ENST00000393120 MUC4Q99102 2169 aa10.55□□□□□ -0.72
MKS1-203ENST00000393120 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
MKS1-203ENST00000393120 MXRA5Q9NR99 2828 aa10.55□□□□□ -0.72
MKS1-203ENST00000393120 CRYGDP07320 174 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms