RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 NAIPQ13075 1403 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 A0A1W2PPM0 123 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 MCRIP1C9JLW8 97 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 CORTO00230 105 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 CAV3P56539 151 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 CATR1Q13166 79 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 WHAMMP3Q1A5X7 153 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 Q56UQ5 140 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 CYP2G1PQ6ZSU1 146 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 C5orf56Q8N8D9 126 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 CGREF1Q99674 301 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 ANKRD31Q8N7Z5 1873 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 LRP5O75197 1615 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 HEATR5BQ9P2D3 2071 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 MBD5Q9P267 1494 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 MYH7BA7E2Y1 1941 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 CACNA1GO43497 2377 aa0.65□□□□□ -2.3
SNORA48.1-201ENST00000390879 FN1P02751 2386 aaKnown RBP0.65□□□□□ -2.3
SNORA48.1-201ENST00000390879 NUMA1Q14980 2115 aa0.65□□□□□ -2.3
SNORA48.1-201ENST00000390879 MYOM3Q5VTT5 1437 aa0.65□□□□□ -2.3
SNORA48.1-201ENST00000390879 HIVEP2P31629 2446 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 APOC4-APOC2K7ER74 178 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 APOC2P02655 101 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 CBLN1P23435 193 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 S100PP25815 95 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 TPPP2P59282 170 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 MRPS10P82664 201 aaKnown RBP0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 INSL4Q14641 139 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 MRPL54Q6P161 138 aaKnown RBP0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 Q6ZS92 163 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 C20orf197Q8N268 126 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 COL11A1P12107 1806 aaPredicted RBP0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 XIRP1Q702N8 1843 aaKnown RBP0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 MICAL3Q7RTP6 2002 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 PTPRMP28827 1452 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 UBR2Q8IWV8 1755 aa0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 MDC1Q14676 2089 aaKnown RBP0.65□□□□□ -2.31
SNORA48.1-201ENST00000390879 SMG6Q86US8 1419 aaKnown RBP0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 WDR97A6NE52 1622 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 TEX49A0A1B0GTD5 131 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 C20orf202A1L168 122 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 ATP6V1G2-DDX39BF2Z307 99 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 IFNA17P01571 189 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 GNG4P50150 75 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 KRTAP10-4P60372 401 aaPredicted RBP0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 PPP3R1P63098 170 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 BTG2P78543 158 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 C9orf153Q5TBE3 101 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 Q6AWC8 147 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 LINC00575Q6W349 94 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 DEFB132Q7Z7B7 95 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 NDUFA11Q86Y39 141 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 Q8N8P6 123 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 C12orf57Q99622 126 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 COA4Q9NYJ1 87 aa0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 CDK12Q9NYV4 1490 aaPredicted RBP0.64□□□□□ -2.31
SNORA48.1-201ENST00000390879 EML6Q6ZMW3 1958 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 ADGRB1O14514 1584 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 CFTRP13569 1480 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 ZNF518AQ6AHZ1 1483 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 TRBV10-3A0A0K0K1G6 114 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 OOSP1A8MZH6 123 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 HCG22E2RYF7 251 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 LY6G6CO95867 125 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 ELOF1P60002 83 aaKnown RBP0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 KRTAP21-3Q3LHN1 58 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 KRTAP5-7Q6L8G8 165 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 C4orf33Q8N1A6 199 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 Q8N6K4 173 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 PPP3R2Q96LZ3 170 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 DSCR8Q96T75 97 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 BET1LQ9NYM9 111 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 AHNAK2Q8IVF2 5795 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 BRWD1Q9NSI6 2320 aa0.63□□□□□ -2.31
SNORA48.1-201ENST00000390879 KIDINS220Q9ULH0 1771 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 WDR7Q9Y4E6 1490 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 RP1P56715 2156 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 KTN1Q86UP2 1357 aaKnown RBP0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 TRAV13-2A0A0B4J235 113 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 PIGBOS1A0A0B4J2F0 54 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 TNFP01375 233 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 CCL3L1P16619 93 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 UBE2D1P51668 147 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 SSBP1Q04837 148 aaKnown RBP0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 KLKP1Q107X0 134 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 FAM74A4Q5TZK3 123 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 C12orf73Q69YU5 71 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 GTF2H5Q6ZYL4 71 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 SVBPQ8N300 66 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 COX7B2Q8TF08 81 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 PPP1R1CQ8WVI7 109 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 PLAC4Q8WY50 150 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 C14orf144Q96I85 54 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 TCEAL7Q9BRU2 100 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 TMEM14BQ9NUH8 114 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 LINC00312Q9Y6C7 94 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 PCNX2A6NKB5 2137 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 POLEQ07864 2286 aa0.62□□□□□ -2.31
SNORA48.1-201ENST00000390879 PHRF1Q9P1Y6 1649 aaKnown RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms