RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 GPHB5Q86YW7 130 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 APRG1Q8IVJ8 170 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 ZFAND2AQ8N6M9 145 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 SLC25A29Q8N8R3 303 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 LY6G5BQ8NDX9 201 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 TMEM263Q8WUH6 116 aaKnown RBP2.61□□□□□ -1.99
TRAV39-201ENST00000390466 ITLN2Q8WWU7 325 aaPredicted RBP2.61□□□□□ -1.99
TRAV39-201ENST00000390466 RPL39LQ96EH5 51 aaKnown RBP2.61□□□□□ -1.99
TRAV39-201ENST00000390466 MRPL53Q96EL3 112 aaKnown RBP2.61□□□□□ -1.99
TRAV39-201ENST00000390466 FAM19A4Q96LR4 140 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 SLC50A1Q9BRV3 221 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 AGPAT4-IT1Q9H0P7 198 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 AAMDCQ9H7C9 122 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 UFC1Q9Y3C8 167 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 KIF25-AS1Q9Y6Z4 181 aa2.61□□□□□ -1.99
TRAV39-201ENST00000390466 ACACAQ13085 2346 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 DMXL2Q8TDJ6 3036 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 TRBV20-1A0A075B6N2 111 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 IGHV4OR15-8A0A075B7B6 117 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 A0A087WW49 117 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 A0A0B4J2C4 111 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 IGHV1-69DA0A0B4J2H0 117 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 TRBV7-7A0A0K0K1E9 115 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 NCBP2LA6PVI3 153 aaKnown RBP2.6□□□□□ -1.99
TRAV39-201ENST00000390466 ZNF815PA8K554 130 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 A8MWV9 139 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 B5MCH6 92 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 TMEM262E9PQX1 116 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 SOCS3O14543 225 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 TIMM23O14925 209 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 NBR2O15453 112 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 BUB3O43684 328 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 SLC25A20O43772 301 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 DUSP14O95147 198 aaKnown RBP2.6□□□□□ -1.99
TRAV39-201ENST00000390466 MED14OSP0DP75 135 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 PSMB2P49721 201 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 POLR2KP53803 58 aaKnown RBP2.6□□□□□ -1.99
TRAV39-201ENST00000390466 MFAP4P55083 255 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 SUMO2P61956 95 aaKnown RBP2.6□□□□□ -1.99
TRAV39-201ENST00000390466 HERV-K104P63124 156 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 CCL8P80075 99 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 PRB3Q04118 309 aaPredicted RBP2.6□□□□□ -1.99
TRAV39-201ENST00000390466 C2orf66Q6UXQ4 117 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 SDIM1Q6ZPB5 146 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 Q8N1Y9 231 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 C14orf178Q8N769 122 aaPredicted RBP2.6□□□□□ -1.99
TRAV39-201ENST00000390466 KLHL30-AS1Q8NEE0 82 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 FDCSPQ8NFU4 85 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 FAM104AQ969W3 186 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 LITAFQ99732 161 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 ANAPC13Q9BS18 74 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 RAXQ9Y2V3 346 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 S4R3C0 116 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 IGSF10Q6WRI0 2623 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 SPENQ96T58 3664 aaKnown RBP2.6□□□□□ -1.99
TRAV39-201ENST00000390466 ZZEF1O43149 2961 aa2.6□□□□□ -1.99
TRAV39-201ENST00000390466 COL6A6A6NMZ7 2263 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.59□□□□□ -1.99
TRAV39-201ENST00000390466 PTPRQQ9UMZ3 2332 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 IGF2RP11717 2491 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 PKD1L2Q7Z442 2459 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 SORL1Q92673 2214 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 TRAV17A0A0B4J275 112 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 A0A0J9YX75 114 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 FAM240AA0A1B0GVK7 77 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 CYSRT1A8MQ03 144 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 H3BVH4 76 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 M0R2P5 195 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 LGALS9O00182 355 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 CDX4O14627 284 aaPredicted RBP2.59□□□□□ -1.99
TRAV39-201ENST00000390466 NDUFB3O43676 98 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 ENSAO43768 121 aaKnown RBP2.59□□□□□ -1.99
TRAV39-201ENST00000390466 ORM1P02763 201 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 IGF1P05019 195 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 RNASE3P12724 160 aaKnown RBP2.59□□□□□ -1.99
TRAV39-201ENST00000390466 PRTN3P24158 256 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 EBI3Q14213 229 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 MRPL23Q16540 153 aaKnown RBP2.59□□□□□ -1.99
TRAV39-201ENST00000390466 ZNF876PQ49A33 203 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 LINC01620Q4KN68 170 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 ORMDL2Q53FV1 153 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 C19orf54Q5BKX5 351 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 LYRM7Q5U5X0 104 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 SFTA2Q6UW10 78 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 TRPT1Q86TN4 253 aaKnown RBP2.59□□□□□ -1.99
TRAV39-201ENST00000390466 RNF182Q8N6D2 247 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 ZNRF2Q8NHG8 242 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 RNASE6Q93091 150 aaKnown RBP2.59□□□□□ -1.99
TRAV39-201ENST00000390466 RAX2Q96IS3 184 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 C20orf173Q96LM9 149 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 CCDC140Q96MF4 163 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 SCGB3A1Q96QR1 104 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 VKORC1Q9BQB6 163 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 HIF1ANQ9NWT6 349 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 C21orf62Q9NYP8 219 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 PRO1854Q9UHT4 67 aa2.59□□□□□ -1.99
TRAV39-201ENST00000390466 UNC79Q9P2D8 2635 aa2.58□□□□□ -2
TRAV39-201ENST00000390466 ANKRD11Q6UB99 2663 aaPredicted RBP2.58□□□□□ -2
TRAV39-201ENST00000390466 ZFYVE26Q68DK2 2539 aa2.58□□□□□ -2
TRAV39-201ENST00000390466 LOC107984156A0A0G2JMH3 177 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms