RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ORMDL2Q53FV1 153 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 PPP1R17O96001 155 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 ERASQ7Z444 233 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
SCFD2-201ENST00000388940 EDN2P20800 178 aa11.22□□□□□ -0.61
SCFD2-201ENST00000388940 C14orf178Q8N769 122 aaPredicted RBP11.22□□□□□ -0.61
SCFD2-201ENST00000388940 AP1S3Q96PC3 154 aa11.22□□□□□ -0.61
SCFD2-201ENST00000388940 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
SCFD2-201ENST00000388940 HIGD1BQ9P298 99 aa11.22□□□□□ -0.61
SCFD2-201ENST00000388940 VPS13CQ709C8 3753 aa11.22□□□□□ -0.61
SCFD2-201ENST00000388940 A0A087WX48 190 aa11.21□□□□□ -0.61
SCFD2-201ENST00000388940 TRAV12-1A0A0B4J245 112 aa11.21□□□□□ -0.61
SCFD2-201ENST00000388940 A6NDN8 102 aa11.21□□□□□ -0.61
SCFD2-201ENST00000388940 SRD5A1P18405 259 aa11.21□□□□□ -0.61
SCFD2-201ENST00000388940 TRAV8-6A0A0B4J262 113 aa11.21□□□□□ -0.62
SCFD2-201ENST00000388940 SPG11Q96JI7 2443 aa11.21□□□□□ -0.62
SCFD2-201ENST00000388940 IGKV2D-26A0A0A0MRZ7 120 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 C7orf71A4D174 169 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
SCFD2-201ENST00000388940 TGFAP01135 160 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 FSHBP01225 129 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 TCTAP57738 103 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 TOMM6Q96B49 74 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 KIF25-AS1Q9Y6Z4 181 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 IGSF10Q6WRI0 2623 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 H3BRM9 83 aa11.2□□□□□ -0.62
SCFD2-201ENST00000388940 MRPL35Q9NZE8 188 aaKnown RBP11.2□□□□□ -0.62
SCFD2-201ENST00000388940 CELSR1Q9NYQ6 3014 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 USP9XQ93008 2570 aaPredicted RBP11.19□□□□□ -0.62
SCFD2-201ENST00000388940 LGALS9O00182 355 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 SPRY2O43597 315 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 COX6B1P14854 86 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 RPL32P62910 135 aaKnown RBP11.19□□□□□ -0.62
SCFD2-201ENST00000388940 ZC2HC1BQ5TFG8 222 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 C10orf99Q6UWK7 81 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 FAM159AQ6UWV7 190 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 ACACBO00763 2458 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 MUC4Q99102 2169 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 IGHV4OR15-8A0A075B7B6 117 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 A0A087WW49 117 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 ELANEP08246 267 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 PLNP26678 52 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 LINC00315P59091 139 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 Q6YL49 198 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
SCFD2-201ENST00000388940 SIGMAR1Q99720 223 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
SCFD2-201ENST00000388940 MGPP08493 103 aa11.18□□□□□ -0.62
SCFD2-201ENST00000388940 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
SCFD2-201ENST00000388940 TMEM160Q9NX00 188 aa11.18□□□□□ -0.62
SCFD2-201ENST00000388940 SELENOKQ9Y6D0 94 aa11.18□□□□□ -0.62
SCFD2-201ENST00000388940 H7C1H1 209 aa11.17□□□□□ -0.62
SCFD2-201ENST00000388940 K7EQG2 157 aa11.17□□□□□ -0.62
SCFD2-201ENST00000388940 LGALS1P09382 135 aaKnown RBP11.17□□□□□ -0.62
SCFD2-201ENST00000388940 CSPG4Q6UVK1 2322 aa11.17□□□□□ -0.62
SCFD2-201ENST00000388940 A0A0J9YX75 114 aa11.17□□□□□ -0.62
SCFD2-201ENST00000388940 SNRPD3P62318 126 aaKnown RBP11.17□□□□□ -0.62
SCFD2-201ENST00000388940 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
SCFD2-201ENST00000388940 COL12A1Q99715 3063 aa11.17□□□□□ -0.62
SCFD2-201ENST00000388940 FLNCQ14315 2725 aa11.16□□□□□ -0.62
SCFD2-201ENST00000388940 C9orf118A6NHY6 69 aa11.16□□□□□ -0.62
SCFD2-201ENST00000388940 F8VRH5 84 aa11.16□□□□□ -0.62
SCFD2-201ENST00000388940 AZU1P20160 251 aa11.16□□□□□ -0.62
SCFD2-201ENST00000388940 RNF152Q8N8N0 203 aa11.16□□□□□ -0.62
SCFD2-201ENST00000388940 NEXN-AS1Q8NBZ9 246 aa11.16□□□□□ -0.62
SCFD2-201ENST00000388940 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
SCFD2-201ENST00000388940 ZNF702PQ9H963 129 aa11.16□□□□□ -0.62
SCFD2-201ENST00000388940 ZNF688P0C7X2 276 aa11.15□□□□□ -0.62
SCFD2-201ENST00000388940 IGHV4-31P0DP07 118 aa11.15□□□□□ -0.62
SCFD2-201ENST00000388940 OR5A1Q8NGJ0 315 aa11.15□□□□□ -0.62
SCFD2-201ENST00000388940 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.63
SCFD2-201ENST00000388940 LINC01549A6NIU2 74 aa11.15□□□□□ -0.63
SCFD2-201ENST00000388940 K7EP34 96 aa11.15□□□□□ -0.63
SCFD2-201ENST00000388940 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.63
SCFD2-201ENST00000388940 C9orf85Q96MD7 179 aa11.15□□□□□ -0.63
SCFD2-201ENST00000388940 TRBV25-1A0A075B6N4 114 aa11.14□□□□□ -0.63
SCFD2-201ENST00000388940 CD7P09564 240 aa11.14□□□□□ -0.63
SCFD2-201ENST00000388940 MTURNQ8N3F0 131 aa11.14□□□□□ -0.63
SCFD2-201ENST00000388940 CHAC1Q9BUX1 264 aa11.14□□□□□ -0.63
SCFD2-201ENST00000388940 SYNJ2BPP57105 145 aa11.13□□□□□ -0.63
SCFD2-201ENST00000388940 TCTEX1D4Q5JR98 221 aa11.13□□□□□ -0.63
SCFD2-201ENST00000388940 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
SCFD2-201ENST00000388940 TTTY13Q9BZ97 58 aa11.13□□□□□ -0.63
SCFD2-201ENST00000388940 CR1P17927 2039 aa11.13□□□□□ -0.63
SCFD2-201ENST00000388940 IGHV3-16A0A0C4DH30 117 aa11.13□□□□□ -0.63
SCFD2-201ENST00000388940 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
SCFD2-201ENST00000388940 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
SCFD2-201ENST00000388940 PRB1P04280 392 aa11.12□□□□□ -0.63
SCFD2-201ENST00000388940 CRYBA4P53673 196 aa11.12□□□□□ -0.63
SCFD2-201ENST00000388940 CKS1BP61024 79 aa11.12□□□□□ -0.63
SCFD2-201ENST00000388940 TAL2Q16559 108 aa11.12□□□□□ -0.63
SCFD2-201ENST00000388940 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
SCFD2-201ENST00000388940 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
SCFD2-201ENST00000388940 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
SCFD2-201ENST00000388940 BEX4Q9NWD9 120 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms