RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 HEATR1Q9H583 2144 aaKnown RBP5.55□□□□□ -1.52
CCDC171-201ENST00000380701 SPTAN1Q13813 2472 aaKnown RBP5.55□□□□□ -1.52
CCDC171-201ENST00000380701 ODF3BA8MYP8 253 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 C11orf45Q8TAV5 145 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 TIMM17AQ99595 171 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 Q9HAA7 133 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 POLEQ07864 2286 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 ZNF625Q96I27 306 aaPredicted RBP5.55□□□□□ -1.52
CCDC171-201ENST00000380701 Q8N7P7 452 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 RNF183Q96D59 192 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 LRRK1Q38SD2 2015 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 MIFP14174 115 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 UBE2AP49459 152 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 FRMPD3Q5JV73 1810 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 IGHV4-31P0DP07 118 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 DEFB136Q30KP8 78 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 PRR31Q5SQ13 230 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 MRPL35Q9NZE8 188 aaKnown RBP5.54□□□□□ -1.52
CCDC171-201ENST00000380701 RPL18AQ02543 176 aaKnown RBP5.54□□□□□ -1.52
CCDC171-201ENST00000380701 MPV17L2Q567V2 206 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 F8W1H4 67 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 OPRPNQ99935 248 aaPredicted RBP5.54□□□□□ -1.52
CCDC171-201ENST00000380701 CITED2Q99967 270 aaPredicted RBP5.54□□□□□ -1.52
CCDC171-201ENST00000380701 MUC6Q6W4X9 2439 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 TRAV12-1A0A0B4J245 112 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 A0A0J9YX75 114 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 OCIAD2Q56VL3 154 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 AMTNQ6UX39 209 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 FANCD2OSQ96PS1 177 aa5.54□□□□□ -1.52
CCDC171-201ENST00000380701 EGR2P11161 476 aaPredicted RBP5.53□□□□□ -1.52
CCDC171-201ENST00000380701 ZNF726P1Q15940 193 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 COX7B2Q8TF08 81 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 B9D2Q9BPU9 175 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 TEX22C9J3V5 150 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 APRG1Q8IVJ8 170 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 Q9H8V8 135 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 PKDREJQ9NTG1 2253 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 ZFP36P26651 326 aaKnown RBP5.53□□□□□ -1.52
CCDC171-201ENST00000380701 ROS1P08922 2347 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 IGLV2-23P01705 113 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 EBI3Q14213 229 aa5.53□□□□□ -1.52
CCDC171-201ENST00000380701 GNRH2O43555 120 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 FGF6P10767 208 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 Q6ZQT7 251 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 WDR81Q562E7 1941 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 WNK2Q9Y3S1 2297 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 CRYBA4P53673 196 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 UBE2V1Q13404 147 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 ZNF843Q8N446 348 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 ABCA1O95477 2261 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 SPINK8P0C7L1 97 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 HAMPP81172 84 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 A0A096LPF7 62 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 F6UB75 175 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 DEFB135Q30KP9 77 aa5.52□□□□□ -1.53
CCDC171-201ENST00000380701 C9orf118A6NHY6 69 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 IGLL5B9A064 214 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 JMJD7-PLA2G4BH0Y9G9 81 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 SPAG11BQ08648 103 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 MBD6Q96DN6 1003 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 CYYR1Q96J86 154 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 CTRLP40313 264 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 UFSP1Q6NVU6 142 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 TMEM61Q8N0U2 210 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 MDC1Q14676 2089 aaKnown RBP5.51□□□□□ -1.53
CCDC171-201ENST00000380701 MALRD1Q5VYJ5 2156 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 TRAV10A0A0B4J240 114 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 KIR2DL5BA0A0G2JN68 375 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 KIR2DL5BA0A0G2JPC4 375 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 CFC1BP0CG36 223 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 CFC1P0CG37 223 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 C10orf91Q5T1B1 145 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 KIR2DL5AQ8N109 375 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 MAP6D1Q9H9H5 199 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 TRAV26-2A0A0B4J265 109 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 A0A1W2PNU3 283 aaPredicted RBP5.51□□□□□ -1.53
CCDC171-201ENST00000380701 ZNF124Q15973 351 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 CEND1Q8N111 149 aa5.51□□□□□ -1.53
CCDC171-201ENST00000380701 PCP4P48539 62 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 HIST2H2BCQ6DN03 193 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 ZNF524Q96C55 264 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 ZNF747Q9BV97 191 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 HIVEP2P31629 2446 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 IGHV3-30P01768 117 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 IGHV3-33P01772 117 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 IGHV3-30-3P0DP02 117 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 IGHV3-30-5P0DP03 117 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 LYPD6BQ8NI32 183 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 SND1-IT1Q9HBX3 110 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 NDUFA7O95182 113 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 PYY3Q5JQD4 70 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 Q8N1Y9 231 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 CARD19Q96LW7 228 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 NLRC5Q86WI3 1866 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 ACACBO00763 2458 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.53
CCDC171-201ENST00000380701 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.5□□□□□ -1.53
CCDC171-201ENST00000380701 IGHV1-58A0A0C4DH39 117 aa5.5□□□□□ -1.53
CCDC171-201ENST00000380701 IGKV2-29A2NJV5 120 aaPredicted RBP5.5□□□□□ -1.53
CCDC171-201ENST00000380701 C5orf38Q86SI9 138 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms