RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 C3orf56Q8N813 242 aa10.97□□□□□ -0.65
SHROOM1-203ENST00000378679 IGHV1-24A0A0C4DH33 117 aa10.96□□□□□ -0.65
SHROOM1-203ENST00000378679 TNFRSF6BO95407 300 aa10.96□□□□□ -0.65
SHROOM1-203ENST00000378679 ADGRG4Q8IZF6 3080 aa10.96□□□□□ -0.65
SHROOM1-203ENST00000378679 PRAC2D3DTV9 90 aa10.96□□□□□ -0.65
SHROOM1-203ENST00000378679 C1QTNF4Q9BXJ3 329 aa10.96□□□□□ -0.65
SHROOM1-203ENST00000378679 CCL24O00175 119 aa10.96□□□□□ -0.66
SHROOM1-203ENST00000378679 ZNF479Q96JC4 524 aa10.96□□□□□ -0.66
SHROOM1-203ENST00000378679 SIGMAR1Q99720 223 aa10.96□□□□□ -0.66
SHROOM1-203ENST00000378679 CSTL1Q9H114 145 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 TMEM158Q8WZ71 300 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 PCSK5Q92824 1860 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 IGHV1OR15-1A0A075B7D0 117 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 IGHV4-31P0DP07 118 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 SEC11AP67812 179 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 ETDBQ3ZM63 59 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 BVES-AS1Q5T3Y7 98 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 HECTD1Q9ULT8 2610 aa10.95□□□□□ -0.66
SHROOM1-203ENST00000378679 K7ERJ3 54 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 CD5LO43866 347 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 MRPL51Q4U2R6 128 aaKnown RBP10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 CCDC140Q96MF4 163 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 ZNF48Q96MX3 618 aaPredicted RBP10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 A0A087WW49 117 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 DPM2O94777 84 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 LAMA5O15230 3695 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 VCYO14598 125 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 DEFB1P60022 68 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 AMTNQ6UX39 209 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 ATP6V0BQ99437 205 aa10.94□□□□□ -0.66
SHROOM1-203ENST00000378679 SPRY2O43597 315 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 LRRC75A-AS1Q8N1F1 130 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 IGF2BP2-AS1Q96M15 143 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 HSD52Q0P140 79 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 ZC2HC1BQ5TFG8 222 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 MRPL53Q96EL3 112 aaKnown RBP10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 KLF12Q9Y4X4 402 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 TSSC4Q9Y5U2 329 aaPredicted RBP10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 K7EP13 123 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 TMEM238LA0A1B0GVL6 79 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 A6NJY4 79 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 RPL13AP40429 203 aaKnown RBP10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 TTTY13Q9BZ97 58 aa10.93□□□□□ -0.66
SHROOM1-203ENST00000378679 ESDP10768 282 aa10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 LENEPQ9Y5L5 61 aa10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 ZFHX4Q86UP3 3567 aa10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 ADAMTSL5Q6ZMM2 481 aa10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 MRPL52Q86TS9 123 aaKnown RBP10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 TRAV26-2A0A0B4J265 109 aa10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 GNRH2O43555 120 aa10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 IGF1P05019 195 aa10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 LYRM7Q5U5X0 104 aa10.92□□□□□ -0.66
SHROOM1-203ENST00000378679 RBAKDNA6NC62 111 aa10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 RPL36AP83881 106 aaKnown RBP10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 PAX2Q02962 417 aa10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 GPHB5Q86YW7 130 aa10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 RPL36ALQ969Q0 106 aaKnown RBP10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 DEFB130BP0DP73 79 aa10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 DEFB130AP0DP74 79 aa10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 CD28P10747 220 aa10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 MEIG1Q5JSS6 88 aa10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 OR9G4Q8NGQ1 327 aa10.91□□□□□ -0.66
SHROOM1-203ENST00000378679 PTPRBP23467 1997 aa10.9□□□□□ -0.66
SHROOM1-203ENST00000378679 IGKV3D-20A0A0C4DH25 116 aa10.9□□□□□ -0.66
SHROOM1-203ENST00000378679 KRTAP10-9P60411 292 aa10.9□□□□□ -0.66
SHROOM1-203ENST00000378679 BBC3Q96PG8 261 aaPredicted RBP10.9□□□□□ -0.66
SHROOM1-203ENST00000378679 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
SHROOM1-203ENST00000378679 DMXL1Q9Y485 3027 aa10.9□□□□□ -0.66
SHROOM1-203ENST00000378679 CHCHD5Q9BSY4 110 aa10.9□□□□□ -0.66
SHROOM1-203ENST00000378679 CHTOPQ9Y3Y2 248 aaKnown RBP10.9□□□□□ -0.66
SHROOM1-203ENST00000378679 K7EMT4 169 aa10.9□□□□□ -0.67
SHROOM1-203ENST00000378679 IGKCP01834 107 aa10.9□□□□□ -0.67
SHROOM1-203ENST00000378679 CD300EQ496F6 205 aaPredicted RBP10.9□□□□□ -0.67
SHROOM1-203ENST00000378679 TNRC18O15417 2968 aaPredicted RBP10.9□□□□□ -0.67
SHROOM1-203ENST00000378679 IGHV3-64A0A075B6Q5 118 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 C2orf70A6NJV1 201 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 NPYP01303 97 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 IGHG4P01861 327 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 Q8N6K4 173 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 PHLDA1Q8WV24 401 aaPredicted RBP10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 TOMM7Q9P0U1 55 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 FOXI2Q6ZQN5 318 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 PCP2Q8IVA1 136 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 MSRB1Q9NZV6 116 aa10.89□□□□□ -0.67
SHROOM1-203ENST00000378679 IGHV3-16A0A0C4DH30 117 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 APRG1Q8IVJ8 170 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 MRAP2Q96G30 205 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 GAGE13Q4V321 117 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 OR5A1Q8NGJ0 315 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 AVPP01185 164 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 CKS1BP61024 79 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 GTSF1Q8WW33 167 aa10.88□□□□□ -0.67
SHROOM1-203ENST00000378679 TMEM89A2RUT3 159 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 SIGLEC8Q9NYZ4 499 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 DNAJC9-AS1A6NH13 148 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms