RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 TRGV3P03979 118 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 U3KQE9 123 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 UCNP55089 124 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 LMO4P61968 165 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 SMIM20Q8N5G0 67 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 EEF1AKMT3Q96AZ1 226 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 PLEKHB2Q96CS7 222 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 CACNA1BQ00975 2339 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 TCL1BO95988 128 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 ZFHX3Q15911 3703 aa10.54□□□□□ -0.72
SF1-205ENST00000377394 TRBV7-1A0A0A6YYK4 115 aa10.53□□□□□ -0.72
SF1-205ENST00000377394 IGHV7-4-1A0A0J9YVY3 117 aa10.53□□□□□ -0.72
SF1-205ENST00000377394 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
SF1-205ENST00000377394 METTL26Q96S19 204 aa10.53□□□□□ -0.72
SF1-205ENST00000377394 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
SF1-205ENST00000377394 TMEM78Q5T7P6 136 aa10.53□□□□□ -0.72
SF1-205ENST00000377394 Q6ZQT7 251 aa10.53□□□□□ -0.72
SF1-205ENST00000377394 ANKRD29Q8N6D5 301 aa10.53□□□□□ -0.72
SF1-205ENST00000377394 C5orf56Q8N8D9 126 aa10.53□□□□□ -0.72
SF1-205ENST00000377394 NPFFO15130 113 aa10.52□□□□□ -0.72
SF1-205ENST00000377394 C9orf47Q6ZRZ4 202 aa10.52□□□□□ -0.72
SF1-205ENST00000377394 UBTD1Q9HAC8 227 aa10.52□□□□□ -0.72
SF1-205ENST00000377394 CITED1Q99966 193 aa10.52□□□□□ -0.73
SF1-205ENST00000377394 BPESC1Q9GZL8 116 aa10.52□□□□□ -0.73
SF1-205ENST00000377394 UBE2D3P61077 147 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 UBE2D2P62837 147 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 LAGE3Q14657 143 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 HIF1ANQ9NWT6 349 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 CRLF1O75462 422 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 PLNP26678 52 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 NRACQ8N912 160 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 UBE2D1P51668 147 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 SRSF9Q13242 221 aaKnown RBP eCLIP10.51□□□□□ -0.73
SF1-205ENST00000377394 C19orf54Q5BKX5 351 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 KLHL30-AS1Q8NEE0 82 aa10.51□□□□□ -0.73
SF1-205ENST00000377394 SPTBN1Q01082 2364 aaKnown RBP10.5□□□□□ -0.73
SF1-205ENST00000377394 IGHV4-4A0A075B6R2 117 aa10.5□□□□□ -0.73
SF1-205ENST00000377394 PRADC1Q9BSG0 188 aa10.5□□□□□ -0.73
SF1-205ENST00000377394 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
SF1-205ENST00000377394 ZNF815PA8K554 130 aa10.5□□□□□ -0.73
SF1-205ENST00000377394 A8MWV9 139 aa10.5□□□□□ -0.73
SF1-205ENST00000377394 F8VRH5 84 aa10.5□□□□□ -0.73
SF1-205ENST00000377394 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
SF1-205ENST00000377394 SCGB1D4Q6XE38 83 aa10.5□□□□□ -0.73
SF1-205ENST00000377394 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
SF1-205ENST00000377394 H7C1H1 209 aa10.49□□□□□ -0.73
SF1-205ENST00000377394 PRR9Q5T870 116 aa10.49□□□□□ -0.73
SF1-205ENST00000377394 COL6A6A6NMZ7 2263 aa10.49□□□□□ -0.73
SF1-205ENST00000377394 LINC01619G3V211 115 aa10.49□□□□□ -0.73
SF1-205ENST00000377394 BRI3O95415 125 aa10.49□□□□□ -0.73
SF1-205ENST00000377394 SLC25A16P16260 332 aa10.49□□□□□ -0.73
SF1-205ENST00000377394 NDUFV3P56181 108 aaKnown RBP10.49□□□□□ -0.73
SF1-205ENST00000377394 CD7P09564 240 aa10.48□□□□□ -0.73
SF1-205ENST00000377394 ITLN2Q8WWU7 325 aaPredicted RBP10.48□□□□□ -0.73
SF1-205ENST00000377394 C20orf173Q96LM9 149 aa10.48□□□□□ -0.73
SF1-205ENST00000377394 TRAV41A0A0B4J266 112 aa10.48□□□□□ -0.73
SF1-205ENST00000377394 RHODO00212 210 aa10.48□□□□□ -0.73
SF1-205ENST00000377394 CRIP2P52943 208 aaPredicted RBP10.48□□□□□ -0.73
SF1-205ENST00000377394 FAM110AQ9BQ89 295 aa10.48□□□□□ -0.73
SF1-205ENST00000377394 LINC00527Q9UJ94 153 aa10.48□□□□□ -0.73
SF1-205ENST00000377394 C16orf92Q96LL3 132 aa10.48□□□□□ -0.73
SF1-205ENST00000377394 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GAGE7O76087 117 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 IGF1P05019 195 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 SRD5A1P18405 259 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GAGE4Q13068 117 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 NDUFA11Q86Y39 141 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 HIVEP3Q5T1R4 2406 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GPHB5Q86YW7 130 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 MOB4Q9Y3A3 225 aa10.47□□□□□ -0.73
SF1-205ENST00000377394 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
SF1-205ENST00000377394 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.73
SF1-205ENST00000377394 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
SF1-205ENST00000377394 IGHV3OR16-10A0A075B7F0 116 aa10.46□□□□□ -0.74
SF1-205ENST00000377394 SPRY2O43597 315 aa10.46□□□□□ -0.74
SF1-205ENST00000377394 SCGB1C2P0DMR2 95 aa10.46□□□□□ -0.74
SF1-205ENST00000377394 C9orf139Q6ZV77 190 aa10.46□□□□□ -0.74
SF1-205ENST00000377394 SBSPONQ8IVN8 264 aa10.46□□□□□ -0.74
SF1-205ENST00000377394 SCGB3A1Q96QR1 104 aa10.46□□□□□ -0.74
SF1-205ENST00000377394 TRBV12-3P01733 135 aa10.45□□□□□ -0.74
SF1-205ENST00000377394 UNQ9165/PRO28630Q6UXU0 137 aa10.45□□□□□ -0.74
SF1-205ENST00000377394 RASL10AQ92737 203 aa10.45□□□□□ -0.74
SF1-205ENST00000377394 LENEPQ9Y5L5 61 aa10.45□□□□□ -0.74
SF1-205ENST00000377394 VPS13CQ709C8 3753 aa10.45□□□□□ -0.74
SF1-205ENST00000377394 EMP1P54849 157 aa10.45□□□□□ -0.74
SF1-205ENST00000377394 TRPT1Q86TN4 253 aaKnown RBP10.45□□□□□ -0.74
SF1-205ENST00000377394 ARL3P36405 182 aa10.44□□□□□ -0.74
SF1-205ENST00000377394 TMEM95Q3KNT9 176 aa10.44□□□□□ -0.74
SF1-205ENST00000377394 ZFAND2AQ8N6M9 145 aa10.44□□□□□ -0.74
SF1-205ENST00000377394 SOCS3O14543 225 aa10.44□□□□□ -0.74
SF1-205ENST00000377394 CFC1BP0CG36 223 aa10.44□□□□□ -0.74
SF1-205ENST00000377394 CFC1P0CG37 223 aa10.44□□□□□ -0.74
SF1-205ENST00000377394 FAM159AQ6UWV7 190 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms