RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 TNFRSF18Q9Y5U5 241 aa8.55□□□□□ -1.04
HDAC6-203ENST00000376619 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
HDAC6-203ENST00000376619 SRSF1Q07955 248 aaKnown RBP eCLIP8.55□□□□□ -1.041e-10■■■□□ 15.3
HDAC6-203ENST00000376619 RRN3P1Q2M238 152 aa8.55□□□□□ -1.04
HDAC6-203ENST00000376619 MS4A6AQ9H2W1 248 aa8.55□□□□□ -1.04
HDAC6-203ENST00000376619 ST20Q9HBF5 79 aa8.55□□□□□ -1.04
HDAC6-203ENST00000376619 OVOL1O14753 267 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 USMG5Q96IX5 58 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 SMAD5-AS1Q9Y6J3 95 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 WI2-2373I1.2A0A1W2PRP0 233 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 HOXD3P31249 432 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-203ENST00000376619 LINC00310P59036 64 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 LAGE3Q14657 143 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 STHQ8IWL8 128 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 MLST8Q9BVC4 326 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 NXT2Q9NPJ8 142 aaKnown RBP8.54□□□□□ -1.04
HDAC6-203ENST00000376619 FBN2P35556 2912 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 FAM223BA6NKX1 122 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 FAM223AQ8IWN6 122 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 ZNF625Q96I27 306 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-203ENST00000376619 MRPL35Q9NZE8 188 aaKnown RBP8.54□□□□□ -1.04
HDAC6-203ENST00000376619 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 KLF12Q9Y4X4 402 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 RASL11AQ6T310 242 aa8.54□□□□□ -1.04
HDAC6-203ENST00000376619 TRGV1A0A0A0MS02 117 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 IGKCP01834 107 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 PLP1P60201 277 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 WFDC11Q8NEX6 87 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 C19orf71A6NCJ1 209 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 CIDEAO60543 219 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 MRGPRG-AS1Q2M3A8 158 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 UNC79Q9P2D8 2635 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 DPM2O94777 84 aa8.53□□□□□ -1.04
HDAC6-203ENST00000376619 IGHV7-4-1A0A0J9YVY3 117 aa8.52□□□□□ -1.04
HDAC6-203ENST00000376619 A0A1B0GW15 77 aa8.52□□□□□ -1.04
HDAC6-203ENST00000376619 ADARB2-AS1A8MUL3 147 aa8.52□□□□□ -1.04
HDAC6-203ENST00000376619 TEX43Q6ZNM6 134 aa8.52□□□□□ -1.04
HDAC6-203ENST00000376619 ZNF418Q8TF45 676 aaPredicted RBP8.52□□□□□ -1.04
HDAC6-203ENST00000376619 IGHV4OR15-8A0A075B7B6 117 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 A0A087WW49 117 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 ATP5LO75964 103 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-203ENST00000376619 C20orf144Q9BQM9 153 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 ZNF747Q9BV97 191 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 GFRA4Q9GZZ7 299 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 TMEM262E9PQX1 116 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 NDUFS8O00217 210 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 CRXO43186 299 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-203ENST00000376619 PPBPP02775 128 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 SLC25A16P16260 332 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 HERVK_113P61574 105 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 C18orf65Q6ZTR6 163 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 SMPXQ9UHP9 88 aa8.52□□□□□ -1.05
HDAC6-203ENST00000376619 NDUFA4O00483 81 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 SUMO2P61956 95 aaKnown RBP8.51□□□□□ -1.05
HDAC6-203ENST00000376619 CT83Q5H943 113 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 GTF2H5Q6ZYL4 71 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 DPH3P1Q9H4G8 78 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 CHTOPQ9Y3Y2 248 aaKnown RBP8.51□□□□□ -1.05
HDAC6-203ENST00000376619 NOTCH1P46531 2555 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 K7ERJ3 54 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 IGLV2-11P01706 119 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 DEFB130BP0DP73 79 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 DEFB130AP0DP74 79 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 C2orf88Q9BSF0 95 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 ZNF815PA8K554 130 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 INS-IGF2F8WCM5 200 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 K7EP13 123 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 DLEU1O43261 78 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 C20orf173Q96LM9 149 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 FABP2P12104 132 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 FOSL1P15407 271 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 C2orf66Q6UXQ4 117 aa8.51□□□□□ -1.05
HDAC6-203ENST00000376619 SPENQ96T58 3664 aaKnown RBP8.5□□□□□ -1.05
HDAC6-203ENST00000376619 LGALS3P17931 250 aaKnown RBP8.5□□□□□ -1.05
HDAC6-203ENST00000376619 SPXQ9BT56 116 aa8.5□□□□□ -1.05
HDAC6-203ENST00000376619 GEMIN7Q9H840 131 aaKnown RBP8.5□□□□□ -1.05
HDAC6-203ENST00000376619 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
HDAC6-203ENST00000376619 SDHAF1A6NFY7 115 aa8.5□□□□□ -1.05
HDAC6-203ENST00000376619 VCX2Q9H322 139 aa8.5□□□□□ -1.05
HDAC6-203ENST00000376619 C11orf68Q9H3H3 251 aaKnown RBP8.5□□□□□ -1.05
HDAC6-203ENST00000376619 MDFICQ9P1T7 246 aa8.5□□□□□ -1.05
HDAC6-203ENST00000376619 C11orf21Q9P2W6 132 aa8.5□□□□□ -1.05
HDAC6-203ENST00000376619 COL27A1Q8IZC6 1860 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-203ENST00000376619 A0A096LPF7 62 aa8.49□□□□□ -1.05
HDAC6-203ENST00000376619 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
HDAC6-203ENST00000376619 SPCS1Q9Y6A9 102 aa8.49□□□□□ -1.05
HDAC6-203ENST00000376619 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
HDAC6-203ENST00000376619 MRPL16Q9NX20 251 aaKnown RBP8.49□□□□□ -1.05
HDAC6-203ENST00000376619 FAM231BA6NCW3 169 aa8.49□□□□□ -1.05
HDAC6-203ENST00000376619 NPIPB6E9PJ23 425 aa8.49□□□□□ -1.05
HDAC6-203ENST00000376619 MYCNOSP40205 109 aa8.48□□□□□ -1.05
HDAC6-203ENST00000376619 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
HDAC6-203ENST00000376619 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-203ENST00000376619 MEGF9Q9H1U4 602 aa8.48□□□□□ -1.05
HDAC6-203ENST00000376619 C2orf70A6NJV1 201 aa8.48□□□□□ -1.05
HDAC6-203ENST00000376619 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
HDAC6-203ENST00000376619 ESM1Q9NQ30 184 aa8.48□□□□□ -1.05
HDAC6-203ENST00000376619 TRAV13-1A0A0B4J241 112 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms