RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 UBE2BP63146 152 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 RPL18Q07020 188 aaKnown RBP6.78□□□□□ -1.32
UBR4-201ENST00000375218 IGFL3Q6UXB1 125 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 GFRALQ6UXV0 394 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 CTSZQ9UBR2 303 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 APCP25054 2843 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 IGHV3OR16-13A0A075B7E8 117 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 A0A1W2PQD3 144 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 RNASE2P10153 161 aaKnown RBP6.78□□□□□ -1.32
UBR4-201ENST00000375218 DYNLT3P51808 116 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 CSMD3Q7Z407 3707 aa6.78□□□□□ -1.32
UBR4-201ENST00000375218 WNT9BO14905 357 aa6.77□□□□□ -1.33
UBR4-201ENST00000375218 PRR3P79522 188 aaKnown RBP6.77□□□□□ -1.33
UBR4-201ENST00000375218 LINC01545Q5VT33 79 aa6.77□□□□□ -1.33
UBR4-201ENST00000375218 FGF23Q9GZV9 251 aaPredicted RBP6.77□□□□□ -1.33
UBR4-201ENST00000375218 TMSB15BA0A087X1C1 80 aa6.77□□□□□ -1.33
UBR4-201ENST00000375218 ZNF138P52744 262 aa6.77□□□□□ -1.33
UBR4-201ENST00000375218 ZNF322Q6U7Q0 402 aaPredicted RBP6.77□□□□□ -1.33
UBR4-201ENST00000375218 PDPNQ86YL7 162 aa6.77□□□□□ -1.33
UBR4-201ENST00000375218 DSCAML1Q8TD84 2053 aa6.77□□□□□ -1.33
UBR4-201ENST00000375218 INAFM1C9JVW0 142 aa6.77□□□□□ -1.33
UBR4-201ENST00000375218 PRH1P02810 166 aa6.77□□□□□ -1.33
UBR4-201ENST00000375218 CRYM-AS1A6NIL9 109 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 ITLN1Q8WWA0 313 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 ITLN2Q8WWU7 325 aaPredicted RBP6.76□□□□□ -1.33
UBR4-201ENST00000375218 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 TTTY13Q9BZ97 58 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 XCL2Q9UBD3 114 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 ZNF736B4DX44 427 aaPredicted RBP6.76□□□□□ -1.33
UBR4-201ENST00000375218 HOXA4Q00056 320 aaPredicted RBP6.76□□□□□ -1.33
UBR4-201ENST00000375218 GPHB5Q86YW7 130 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 GTSF1Q8WW33 167 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 SMDT1Q9H4I9 107 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 LMO4P61968 165 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 NACAE9PAV3 2078 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 RAI1Q7Z5J4 1906 aaPredicted RBP6.76□□□□□ -1.33
UBR4-201ENST00000375218 NF1P21359 2839 aa6.76□□□□□ -1.33
UBR4-201ENST00000375218 OTOGQ6ZRI0 2925 aa6.75□□□□□ -1.33
UBR4-201ENST00000375218 KLLNB2CW77 178 aa6.75□□□□□ -1.33
UBR4-201ENST00000375218 NANOS2P60321 138 aaKnown RBP6.75□□□□□ -1.33
UBR4-201ENST00000375218 ZNF876PQ49A33 203 aa6.75□□□□□ -1.33
UBR4-201ENST00000375218 C1orf147Q96MC9 270 aaPredicted RBP6.75□□□□□ -1.33
UBR4-201ENST00000375218 MGST2Q99735 147 aa6.75□□□□□ -1.33
UBR4-201ENST00000375218 ATOX1O00244 68 aa6.75□□□□□ -1.33
UBR4-201ENST00000375218 IGLV3-1P01715 115 aa6.75□□□□□ -1.33
UBR4-201ENST00000375218 ZNF823P16415 610 aa6.75□□□□□ -1.33
UBR4-201ENST00000375218 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.75□□□□□ -1.33
UBR4-201ENST00000375218 ZNF627Q7L945 461 aa6.75□□□□□ -1.33
UBR4-201ENST00000375218 IL3RAP26951 378 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 ZNF56Q15929 161 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 KRTAP27-1Q3LI81 207 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 IL36BQ9NZH7 164 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 PKD1L2Q7Z442 2459 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 IGKV1-16P04430 117 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 VSIG2Q96IQ7 327 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 IGKV1-5P01602 117 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 HBDP02042 147 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 PTHLHP12272 177 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
UBR4-201ENST00000375218 TRAV14DV4A0A0A6YYC5 116 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 UBE2L5PA0A1B0GUS4 154 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 HSPB1P04792 205 aaKnown RBP6.73□□□□□ -1.33
UBR4-201ENST00000375218 SPINK14Q6IE38 97 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 CD177Q8N6Q3 437 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 SPTSSAQ969W0 71 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 C18orf12Q96KH6 178 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 CHD6Q8TD26 2715 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 PSPHP1O15172 72 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 ATP6V0E1O15342 81 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 FCGR2CP31995 323 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 CEMP1Q6PRD7 247 aaPredicted RBP6.73□□□□□ -1.33
UBR4-201ENST00000375218 INTS1Q8N201 2190 aaKnown RBP6.73□□□□□ -1.33
UBR4-201ENST00000375218 IGHV3-15A0A0B4J1V0 119 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 PTPRZ1P23471 2315 aaPredicted RBP6.73□□□□□ -1.33
UBR4-201ENST00000375218 H3BVH4 76 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 TFF1P04155 84 aa6.73□□□□□ -1.33
UBR4-201ENST00000375218 APC2O95996 2303 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 FSTL3O95633 263 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 HLA-DMBP28068 263 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 KIAA0087Q14695 138 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 NUP37Q8NFH4 326 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 CLEC7AQ9BXN2 247 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 USP9XQ93008 2570 aaPredicted RBP6.72□□□□□ -1.33
UBR4-201ENST00000375218 IGHV3OR16-9A0A0B4J2B5 98 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 OSTCQ9NRP0 149 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 TANC2Q9HCD6 1990 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 IGKV1-12A0A0C4DH73 117 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 SSSCA1O60232 199 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 IGKV1D-12P01611 117 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
UBR4-201ENST00000375218 FAM57BQ71RH2 274 aa6.71□□□□□ -1.33
UBR4-201ENST00000375218 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.33
UBR4-201ENST00000375218 IGKV1-9A0A0C4DH69 117 aa6.71□□□□□ -1.34
UBR4-201ENST00000375218 KISS1Q15726 138 aa6.71□□□□□ -1.34
UBR4-201ENST00000375218 TMEM155Q4W5P6 130 aa6.71□□□□□ -1.34
UBR4-201ENST00000375218 C6orf201Q7Z4U5 140 aa6.71□□□□□ -1.34
UBR4-201ENST00000375218 SRP19P09132 144 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms