RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
HSPG2-202ENST00000374676 MED14OSP0DP75 135 aa8.03□□□□□ -1.12
HSPG2-202ENST00000374676 RPL19P84098 196 aaKnown RBP8.03□□□□□ -1.12
HSPG2-202ENST00000374676 LINC01551Q86U37 167 aa8.03□□□□□ -1.12
HSPG2-202ENST00000374676 FAM210BQ96KR6 192 aa8.03□□□□□ -1.12
HSPG2-202ENST00000374676 SCRT2Q9NQ03 307 aa8.03□□□□□ -1.12
HSPG2-202ENST00000374676 MRPL16Q9NX20 251 aaKnown RBP8.03□□□□□ -1.12
HSPG2-202ENST00000374676 NAT8Q9UHE5 227 aa8.03□□□□□ -1.12
HSPG2-202ENST00000374676 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
HSPG2-202ENST00000374676 LINC00862A6NCI5 91 aa8.02□□□□□ -1.13
HSPG2-202ENST00000374676 ZNF876PQ49A33 203 aa8.02□□□□□ -1.13
HSPG2-202ENST00000374676 UQCC3Q6UW78 93 aa8.02□□□□□ -1.13
HSPG2-202ENST00000374676 OR2D3Q8NGH3 330 aa8.02□□□□□ -1.13
HSPG2-202ENST00000374676 SSBP4Q9BWG4 385 aaPredicted RBP8.02□□□□□ -1.13
HSPG2-202ENST00000374676 XKRY2A2RUG3 117 aa8.01□□□□□ -1.13
HSPG2-202ENST00000374676 H3BVH4 76 aa8.01□□□□□ -1.13
HSPG2-202ENST00000374676 SNAI2O43623 268 aa8.01□□□□□ -1.13
HSPG2-202ENST00000374676 OR5AL1P0C617 328 aa8.01□□□□□ -1.13
HSPG2-202ENST00000374676 TCTAP57738 103 aa8.01□□□□□ -1.13
HSPG2-202ENST00000374676 RPL23P62829 140 aaKnown RBP8.01□□□□□ -1.13
HSPG2-202ENST00000374676 RNASE7Q9H1E1 156 aaKnown RBP8.01□□□□□ -1.13
HSPG2-202ENST00000374676 OSTCQ9NRP0 149 aa8.01□□□□□ -1.13
HSPG2-202ENST00000374676 TRAV4A0A0B4J268 109 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 F5H768 121 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 RS1O15537 224 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 GATCO43716 136 aaKnown RBP8□□□□□ -1.13
HSPG2-202ENST00000374676 CIDEAO60543 219 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 SFTA3P0C7M3 94 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 IGLC6P0CF74 106 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 HTN3P15516 51 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 POM121L12Q8N7R1 296 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 RPP21Q9H633 154 aaKnown RBP8□□□□□ -1.13
HSPG2-202ENST00000374676 PHLDA3Q9Y5J5 127 aa8□□□□□ -1.13
HSPG2-202ENST00000374676 A0A1W2PPQ1 181 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 IGLL5B9A064 214 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 HOXA5P20719 270 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 ERVFC1-1P60608 527 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 SLAQ13239 276 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 CT83Q5H943 113 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 DMRTA1Q5VZB9 504 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 ZFP82Q8N141 532 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 SYT8Q8NBV8 401 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 OR4C5Q8NGB2 326 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 ISOC2Q96AB3 205 aa7.99□□□□□ -1.13
HSPG2-202ENST00000374676 LYSTQ99698 3801 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 IGHV4-4A0A075B6R2 117 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 A8MWL6 223 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 A8MWV9 139 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 F2Z2F3 143 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 NXPH4O95158 308 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 GZMBP10144 247 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 FHL2Q14192 279 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 ADIRFQ15847 76 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 WDR73Q6P4I2 378 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 COMMD7Q86VX2 200 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 FER1L6-AS1Q8NA97 138 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 ZNF479Q96JC4 524 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 APLNQ9ULZ1 77 aa7.98□□□□□ -1.13
HSPG2-202ENST00000374676 TMEM218A2RU14 115 aa7.97□□□□□ -1.13
HSPG2-202ENST00000374676 H3BNG1 76 aa7.97□□□□□ -1.13
HSPG2-202ENST00000374676 IGHV3-53P01767 116 aa7.97□□□□□ -1.13
HSPG2-202ENST00000374676 FOXA3P55318 350 aaPredicted RBP7.97□□□□□ -1.13
HSPG2-202ENST00000374676 TMEM88Q6PEY1 159 aa7.97□□□□□ -1.13
HSPG2-202ENST00000374676 ZFP2Q6ZN57 461 aa7.97□□□□□ -1.13
HSPG2-202ENST00000374676 C15orf54Q8N8G6 183 aa7.97□□□□□ -1.13
HSPG2-202ENST00000374676 OR10AG1Q8NH19 301 aa7.97□□□□□ -1.13
HSPG2-202ENST00000374676 SFRP2Q96HF1 295 aa7.97□□□□□ -1.13
HSPG2-202ENST00000374676 TRGV4A0A0C4DH28 118 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 FAM231BA6NCW3 169 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 M0R381 172 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 CACNG7P62955 275 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
HSPG2-202ENST00000374676 LYZL1Q6UWQ5 148 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 C15orf53Q8NAA6 179 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 PRO0255Q9UI72 69 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 HHLA3Q9XRX5 114 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 V9GYV3 84 aa7.96□□□□□ -1.14
HSPG2-202ENST00000374676 VPS13DQ5THJ4 4388 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 DNAH1Q9P2D7 4330 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 TRAV26-1A0A087WT03 109 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 GATA1P15976 413 aaPredicted RBP7.95□□□□□ -1.14
HSPG2-202ENST00000374676 CTRLP40313 264 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 CRYBA4P53673 196 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 SPANXN1Q5VSR9 72 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 UFSP1Q6NVU6 142 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 TSKUQ8WUA8 353 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 GTSF1Q8WW33 167 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 VSIG2Q96IQ7 327 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 CNFNQ9BYD5 112 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 GFRA4Q9GZZ7 299 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 JPT2Q9H910 190 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 ALMS1Q8TCU4 4167 aa7.95□□□□□ -1.14
HSPG2-202ENST00000374676 MUC21A0A0G2JKD1 596 aa7.94□□□□□ -1.14
HSPG2-202ENST00000374676 MUC21A0A140T8X8 626 aa7.94□□□□□ -1.14
HSPG2-202ENST00000374676 F8W036 122 aa7.94□□□□□ -1.14
HSPG2-202ENST00000374676 RHODO00212 210 aa7.94□□□□□ -1.14
HSPG2-202ENST00000374676 PAX4O43316 350 aa7.94□□□□□ -1.14
HSPG2-202ENST00000374676 CRYGDP07320 174 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms