RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 DEFB125Q8N687 156 aa13.08□□□□□ -0.32
LMNA-205ENST00000368299 WFDC12Q8WWY7 111 aa13.08□□□□□ -0.32
LMNA-205ENST00000368299 DPF1Q92782 380 aa13.08□□□□□ -0.32
LMNA-205ENST00000368299 LINC01546A6NGU7 62 aa13.08□□□□□ -0.32
LMNA-205ENST00000368299 Q6ZSV7 163 aa13.08□□□□□ -0.32
LMNA-205ENST00000368299 PHLDA3Q9Y5J5 127 aa13.08□□□□□ -0.32
LMNA-205ENST00000368299 NBPF19A0A087WUL8 3843 aa13.07□□□□□ -0.32
LMNA-205ENST00000368299 HBDP02042 147 aa13.07□□□□□ -0.32
LMNA-205ENST00000368299 OR11H1Q8NG94 326 aa13.07□□□□□ -0.32
LMNA-205ENST00000368299 CBY1Q9Y3M2 126 aa13.07□□□□□ -0.32
LMNA-205ENST00000368299 TAX1BP3O14907 124 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 DUSP14O95147 198 aaKnown RBP13.06□□□□□ -0.32
LMNA-205ENST00000368299 SLURP1P55000 103 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 MRAP2Q96G30 205 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 SCGB2A2Q13296 93 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 DEFB136Q30KP8 78 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 LGALS9BQ3B8N2 356 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 LGALS9CQ6DKI2 356 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 FAM159AQ6UWV7 190 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 OR1N2Q8NGR9 330 aa13.06□□□□□ -0.32
LMNA-205ENST00000368299 KRTAP1-1Q07627 177 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 KHDC1LQ5JSQ8 128 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 OR2K2Q8NGT1 345 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 C7orf71A4D174 169 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 PRSS47A8MTI9 375 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 C2orf91Q6ZV80 131 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 OR9G4Q8NGQ1 327 aa13.05□□□□□ -0.32
LMNA-205ENST00000368299 M0R381 172 aa13.04□□□□□ -0.32
LMNA-205ENST00000368299 RNASE3P12724 160 aaKnown RBP13.04□□□□□ -0.32
LMNA-205ENST00000368299 YAE1D1Q9NRH1 226 aa13.04□□□□□ -0.32
LMNA-205ENST00000368299 GNRH2O43555 120 aa13.04□□□□□ -0.32
LMNA-205ENST00000368299 GAS8-AS1O95177 125 aa13.04□□□□□ -0.32
LMNA-205ENST00000368299 VAMP3Q15836 100 aa13.04□□□□□ -0.32
LMNA-205ENST00000368299 DPH3P1Q9H4G8 78 aa13.04□□□□□ -0.32
LMNA-205ENST00000368299 K7EP13 123 aa13.03□□□□□ -0.32
LMNA-205ENST00000368299 Q8N8P6 123 aa13.03□□□□□ -0.32
LMNA-205ENST00000368299 KLHL30-AS1Q8NEE0 82 aa13.03□□□□□ -0.32
LMNA-205ENST00000368299 CDKN1BP46527 198 aa13.02□□□□□ -0.32
LMNA-205ENST00000368299 NRACQ8N912 160 aa13.02□□□□□ -0.32
LMNA-205ENST00000368299 ZNF469Q96JG9 3925 aaPredicted RBP13.02□□□□□ -0.32
LMNA-205ENST00000368299 CCDC168Q8NDH2 2452 aa13.02□□□□□ -0.33
LMNA-205ENST00000368299 NXPH4O95158 308 aa13.02□□□□□ -0.33
LMNA-205ENST00000368299 FGF6P10767 208 aa13.02□□□□□ -0.33
LMNA-205ENST00000368299 GATA1P15976 413 aaPredicted RBP13.02□□□□□ -0.33
LMNA-205ENST00000368299 OR4C5Q8NGB2 326 aa13.02□□□□□ -0.33
LMNA-205ENST00000368299 AP1S3Q96PC3 154 aa13.02□□□□□ -0.33
LMNA-205ENST00000368299 TRAV12-3A0A0B4J271 114 aa13.01□□□□□ -0.33
LMNA-205ENST00000368299 ANKRD39Q53RE8 183 aa13.01□□□□□ -0.33
LMNA-205ENST00000368299 ESM1Q9NQ30 184 aa13.01□□□□□ -0.33
LMNA-205ENST00000368299 TLN2Q9Y4G6 2542 aa13.01□□□□□ -0.33
LMNA-205ENST00000368299 FCER1GP30273 86 aa13.01□□□□□ -0.33
LMNA-205ENST00000368299 IFI27L1Q96BM0 104 aa13.01□□□□□ -0.33
LMNA-205ENST00000368299 FLNAP21333 2647 aaKnown RBP13.01□□□□□ -0.33
LMNA-205ENST00000368299 PDZD2O15018 2839 aa13□□□□□ -0.33
LMNA-205ENST00000368299 IGLV2-18A0A075B6J9 118 aa13□□□□□ -0.33
LMNA-205ENST00000368299 SVIPQ8NHG7 77 aa13□□□□□ -0.33
LMNA-205ENST00000368299 MYO9AB2RTY4 2548 aa13□□□□□ -0.33
LMNA-205ENST00000368299 RNASE8Q8TDE3 154 aaKnown RBP13□□□□□ -0.33
LMNA-205ENST00000368299 DLX4Q92988 240 aaPredicted RBP13□□□□□ -0.33
LMNA-205ENST00000368299 TRAV26-2A0A0B4J265 109 aa12.99□□□□□ -0.33
LMNA-205ENST00000368299 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
LMNA-205ENST00000368299 CD7P09564 240 aa12.99□□□□□ -0.33
LMNA-205ENST00000368299 FXYD7P58549 80 aa12.99□□□□□ -0.33
LMNA-205ENST00000368299 C14orf178Q8N769 122 aaPredicted RBP12.99□□□□□ -0.33
LMNA-205ENST00000368299 HELZ2Q9BYK8 2649 aaKnown RBP12.99□□□□□ -0.33
LMNA-205ENST00000368299 PPP1R17O96001 155 aa12.99□□□□□ -0.33
LMNA-205ENST00000368299 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
LMNA-205ENST00000368299 SEC11AP67812 179 aa12.99□□□□□ -0.33
LMNA-205ENST00000368299 BOD1L2Q8IYS8 172 aa12.99□□□□□ -0.33
LMNA-205ENST00000368299 DYNLRB2Q8TF09 96 aa12.99□□□□□ -0.33
LMNA-205ENST00000368299 TMEM97Q5BJF2 176 aa12.98□□□□□ -0.33
LMNA-205ENST00000368299 ERASQ7Z444 233 aa12.98□□□□□ -0.33
LMNA-205ENST00000368299 DUX3Q96PT4 197 aa12.98□□□□□ -0.33
LMNA-205ENST00000368299 C20orf78Q9BR46 151 aa12.98□□□□□ -0.33
LMNA-205ENST00000368299 TMEM160Q9NX00 188 aa12.97□□□□□ -0.33
LMNA-205ENST00000368299 CBY3A6NI87 242 aa12.97□□□□□ -0.33
LMNA-205ENST00000368299 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
LMNA-205ENST00000368299 AMTNQ6UX39 209 aa12.97□□□□□ -0.33
LMNA-205ENST00000368299 TMEM61Q8N0U2 210 aa12.97□□□□□ -0.33
LMNA-205ENST00000368299 POM121L12Q8N7R1 296 aa12.97□□□□□ -0.33
LMNA-205ENST00000368299 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
LMNA-205ENST00000368299 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
LMNA-205ENST00000368299 IGHV1OR15-1A0A075B7D0 117 aa12.96□□□□□ -0.33
LMNA-205ENST00000368299 SMIM17P0DL12 118 aa12.96□□□□□ -0.33
LMNA-205ENST00000368299 LAGE3Q14657 143 aa12.96□□□□□ -0.33
LMNA-205ENST00000368299 SONP18583 2426 aaKnown RBP12.96□□□□□ -0.33
LMNA-205ENST00000368299 A8MTW9 85 aa12.96□□□□□ -0.34
LMNA-205ENST00000368299 SPRY2O43597 315 aa12.96□□□□□ -0.34
LMNA-205ENST00000368299 HLA-DRB4P13762 266 aa12.96□□□□□ -0.34
LMNA-205ENST00000368299 DEFB131AP59861 70 aa12.96□□□□□ -0.34
LMNA-205ENST00000368299 RBX1P62877 108 aa12.96□□□□□ -0.34
LMNA-205ENST00000368299 SMIM2Q9BVW6 85 aa12.96□□□□□ -0.34
LMNA-205ENST00000368299 HLA-DRB4X5D2U9 266 aa12.96□□□□□ -0.34
LMNA-205ENST00000368299 IGHV3-16A0A0C4DH30 117 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 K7EMI3 77 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms