RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ITPR3Q14573 2671 aa17.01■□□□□ 0.31
LDB1-201ENST00000361198 NRACQ8N912 160 aa17.01■□□□□ 0.31
LDB1-201ENST00000361198 DCANP1Q8TF63 244 aa17.01■□□□□ 0.31
LDB1-201ENST00000361198 FAM19A4Q96LR4 140 aa17.01■□□□□ 0.31
LDB1-201ENST00000361198 SMIM15Q7Z3B0 74 aa17■□□□□ 0.31
LDB1-201ENST00000361198 TMEM158Q8WZ71 300 aa17■□□□□ 0.31
LDB1-201ENST00000361198 DUX5Q96PT3 197 aa17■□□□□ 0.31
LDB1-201ENST00000361198 MYO9AB2RTY4 2548 aa17■□□□□ 0.31
LDB1-201ENST00000361198 A6NDN8 102 aa17■□□□□ 0.31
LDB1-201ENST00000361198 H3BRM9 83 aa17■□□□□ 0.31
LDB1-201ENST00000361198 KIR3DS1Q14943 382 aa17■□□□□ 0.31
LDB1-201ENST00000361198 ELANEP08246 267 aa16.99■□□□□ 0.31
LDB1-201ENST00000361198 NMUP48645 174 aa16.99■□□□□ 0.31
LDB1-201ENST00000361198 MYOZ3Q8TDC0 251 aa16.99■□□□□ 0.31
LDB1-201ENST00000361198 TRAV21A0A0B4J279 112 aa16.99■□□□□ 0.31
LDB1-201ENST00000361198 H3BVH4 76 aa16.99■□□□□ 0.31
LDB1-201ENST00000361198 TCTAP57738 103 aa16.99■□□□□ 0.31
LDB1-201ENST00000361198 CCDC168Q8NDH2 2452 aa16.98■□□□□ 0.31
LDB1-201ENST00000361198 ATP5LO75964 103 aa16.98■□□□□ 0.31
LDB1-201ENST00000361198 PRSS1P07477 247 aa16.98■□□□□ 0.31
LDB1-201ENST00000361198 LGALS1P09382 135 aaKnown RBP16.98■□□□□ 0.31
LDB1-201ENST00000361198 IGHV4OR15-8A0A075B7B6 117 aa16.97■□□□□ 0.31
LDB1-201ENST00000361198 A0A087WW49 117 aa16.97■□□□□ 0.31
LDB1-201ENST00000361198 RNASE4P34096 147 aaKnown RBP16.97■□□□□ 0.31
LDB1-201ENST00000361198 CDKN1BP46527 198 aa16.97■□□□□ 0.31
LDB1-201ENST00000361198 SPANXN1Q5VSR9 72 aa16.97■□□□□ 0.31
LDB1-201ENST00000361198 SONP18583 2426 aaKnown RBP16.97■□□□□ 0.31
LDB1-201ENST00000361198 C9orf118A6NHY6 69 aa16.96■□□□□ 0.31
LDB1-201ENST00000361198 SMIM17P0DL12 118 aa16.96■□□□□ 0.31
LDB1-201ENST00000361198 SYNJ2BPP57105 145 aa16.96■□□□□ 0.31
LDB1-201ENST00000361198 IGKCP01834 107 aa16.96■□□□□ 0.31
LDB1-201ENST00000361198 ID1P41134 155 aa16.96■□□□□ 0.31
LDB1-201ENST00000361198 HIST2H2BCQ6DN03 193 aa16.96■□□□□ 0.31
LDB1-201ENST00000361198 APRG1Q8IVJ8 170 aa16.96■□□□□ 0.31
LDB1-201ENST00000361198 UBE2E2Q96LR5 201 aa16.96■□□□□ 0.31
LDB1-201ENST00000361198 LAGE3Q14657 143 aa16.95■□□□□ 0.3
LDB1-201ENST00000361198 CST9LQ9H4G1 147 aa16.95■□□□□ 0.3
LDB1-201ENST00000361198 IGKV2D-26A0A0A0MRZ7 120 aa16.95■□□□□ 0.3
LDB1-201ENST00000361198 ANXA2RQ3ZCQ2 193 aa16.95■□□□□ 0.3
LDB1-201ENST00000361198 HIGD1BQ9P298 99 aa16.95■□□□□ 0.3
LDB1-201ENST00000361198 WFDC11Q8NEX6 87 aa16.94■□□□□ 0.3
LDB1-201ENST00000361198 FOXC2Q99958 501 aa16.94■□□□□ 0.3
LDB1-201ENST00000361198 TRAV26-2A0A0B4J265 109 aa16.94■□□□□ 0.3
LDB1-201ENST00000361198 TRBV7-9A0A0J9YWB2 115 aa16.94■□□□□ 0.3
LDB1-201ENST00000361198 SPRY2O43597 315 aa16.94■□□□□ 0.3
LDB1-201ENST00000361198 MRAP2Q96G30 205 aa16.94■□□□□ 0.3
LDB1-201ENST00000361198 DPM2O94777 84 aa16.93■□□□□ 0.3
LDB1-201ENST00000361198 SAMD13Q5VXD3 122 aa16.93■□□□□ 0.3
LDB1-201ENST00000361198 RNF152Q8N8N0 203 aa16.93■□□□□ 0.3
LDB1-201ENST00000361198 SORL1Q92673 2214 aa16.93■□□□□ 0.3
LDB1-201ENST00000361198 GAGE12BA1L429 117 aa16.93■□□□□ 0.3
LDB1-201ENST00000361198 HOXD3P31249 432 aaPredicted RBP16.93■□□□□ 0.3
LDB1-201ENST00000361198 UFSP1Q6NVU6 142 aa16.93■□□□□ 0.3
LDB1-201ENST00000361198 FLNAP21333 2647 aaKnown RBP16.92■□□□□ 0.3
LDB1-201ENST00000361198 GAGE10A6NGK3 116 aa16.91■□□□□ 0.3
LDB1-201ENST00000361198 LGALS9O00182 355 aa16.91■□□□□ 0.3
LDB1-201ENST00000361198 ZNF688P0C7X2 276 aa16.91■□□□□ 0.3
LDB1-201ENST00000361198 S100A4P26447 101 aaKnown RBP16.91■□□□□ 0.3
LDB1-201ENST00000361198 WFDC12Q8WWY7 111 aa16.91■□□□□ 0.3
LDB1-201ENST00000361198 HLA-DRB4P13762 266 aa16.91■□□□□ 0.3
LDB1-201ENST00000361198 Q8N2B8 174 aa16.91■□□□□ 0.3
LDB1-201ENST00000361198 HLA-DRB4X5D2U9 266 aa16.91■□□□□ 0.3
LDB1-201ENST00000361198 AKAP9Q99996 3911 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 KLLNB2CW77 178 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 GNRH2O43555 120 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 ASIPP42127 132 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 OCIAD2Q56VL3 154 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 C18orf65Q6ZTR6 163 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 AP1S3Q96PC3 154 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 JMJD8Q96S16 334 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 M0R381 172 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 PCP4P48539 62 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 ZC2HC1BQ5TFG8 222 aa16.9■□□□□ 0.3
LDB1-201ENST00000361198 GTF2H5Q6ZYL4 71 aa16.89■□□□□ 0.29
LDB1-201ENST00000361198 AGRNO00468 2067 aa16.88■□□□□ 0.29
LDB1-201ENST00000361198 H3BUT2 72 aa16.88■□□□□ 0.29
LDB1-201ENST00000361198 K7EQG2 157 aa16.88■□□□□ 0.29
LDB1-201ENST00000361198 DEFB136Q30KP8 78 aa16.88■□□□□ 0.29
LDB1-201ENST00000361198 SMIM2Q9BVW6 85 aa16.88■□□□□ 0.29
LDB1-201ENST00000361198 MRPL35Q9NZE8 188 aaKnown RBP16.88■□□□□ 0.29
LDB1-201ENST00000361198 A0A087WX48 190 aa16.87■□□□□ 0.29
LDB1-201ENST00000361198 GTSCR1Q86UQ5 136 aa16.87■□□□□ 0.29
LDB1-201ENST00000361198 TTTY13Q9BZ97 58 aa16.87■□□□□ 0.29
LDB1-201ENST00000361198 PHLDA3Q9Y5J5 127 aa16.87■□□□□ 0.29
LDB1-201ENST00000361198 RNASE3P12724 160 aaKnown RBP16.87■□□□□ 0.29
LDB1-201ENST00000361198 SNRPD3P62318 126 aaKnown RBP16.87■□□□□ 0.29
LDB1-201ENST00000361198 MED14OSP0DP75 135 aa16.86■□□□□ 0.29
LDB1-201ENST00000361198 TRBV25-1A0A075B6N4 114 aa16.86■□□□□ 0.29
LDB1-201ENST00000361198 TMEM160Q9NX00 188 aa16.86■□□□□ 0.29
LDB1-201ENST00000361198 MUC4Q99102 2169 aa16.85■□□□□ 0.29
LDB1-201ENST00000361198 K7EP34 96 aa16.85■□□□□ 0.29
LDB1-201ENST00000361198 SLURP1P55000 103 aa16.85■□□□□ 0.29
LDB1-201ENST00000361198 C20orf78Q9BR46 151 aa16.85■□□□□ 0.29
LDB1-201ENST00000361198 CHAC1Q9BUX1 264 aa16.85■□□□□ 0.29
LDB1-201ENST00000361198 HELZ2Q9BYK8 2649 aaKnown RBP16.85■□□□□ 0.29
LDB1-201ENST00000361198 A0A0J9YX75 114 aa16.85■□□□□ 0.29
LDB1-201ENST00000361198 K7EMI3 77 aa16.84■□□□□ 0.29
LDB1-201ENST00000361198 RASL10AQ92737 203 aa16.84■□□□□ 0.29
LDB1-201ENST00000361198 DPH3P1Q9H4G8 78 aa16.84■□□□□ 0.29
LDB1-201ENST00000361198 CUBNO60494 3623 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms