RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 RPL35AP18077 110 aaKnown RBP16.93■□□□□ 0.3
SDF4-202ENST00000360001 CACNG7P62955 275 aa16.93■□□□□ 0.3
SDF4-202ENST00000360001 NDUFA6P56556 154 aa16.93■□□□□ 0.3
SDF4-202ENST00000360001 SPANXN1Q5VSR9 72 aa16.92■□□□□ 0.3
SDF4-202ENST00000360001 MDFICQ9P1T7 246 aa16.92■□□□□ 0.3
SDF4-202ENST00000360001 ANK2Q01484 3957 aa16.92■□□□□ 0.3
SDF4-202ENST00000360001 SNRPEP62304 92 aaKnown RBP16.91■□□□□ 0.3
SDF4-202ENST00000360001 PHLDA3Q9Y5J5 127 aa16.91■□□□□ 0.3
SDF4-202ENST00000360001 MUC4Q99102 2169 aa16.91■□□□□ 0.3
SDF4-202ENST00000360001 C5orf52A6NGY3 159 aa16.91■□□□□ 0.3
SDF4-202ENST00000360001 LINC00467Q9BRT7 94 aa16.91■□□□□ 0.3
SDF4-202ENST00000360001 PKD1L1Q8TDX9 2849 aa16.9■□□□□ 0.3
SDF4-202ENST00000360001 LOC102724200A0A096LPH7 203 aaPredicted RBP16.9■□□□□ 0.3
SDF4-202ENST00000360001 LOC105371267A0A1B0GV96 52 aa16.9■□□□□ 0.3
SDF4-202ENST00000360001 CBY3A6NI87 242 aa16.9■□□□□ 0.3
SDF4-202ENST00000360001 C1orf158Q8N1D5 194 aa16.9■□□□□ 0.3
SDF4-202ENST00000360001 C9orf85Q96MD7 179 aa16.9■□□□□ 0.3
SDF4-202ENST00000360001 TMEM191AQ9H0A3 160 aa16.9■□□□□ 0.3
SDF4-202ENST00000360001 TRGV11A0A075B6L2 103 aa16.89■□□□□ 0.3
SDF4-202ENST00000360001 M0R381 172 aa16.89■□□□□ 0.3
SDF4-202ENST00000360001 SRIP30626 198 aa16.89■□□□□ 0.3
SDF4-202ENST00000360001 OXLD1Q5BKU9 147 aa16.89■□□□□ 0.3
SDF4-202ENST00000360001 LINC01587Q99440 93 aa16.89■□□□□ 0.3
SDF4-202ENST00000360001 PRM2P04554 102 aa16.89■□□□□ 0.29
SDF4-202ENST00000360001 HTN1P15515 57 aa16.89■□□□□ 0.29
SDF4-202ENST00000360001 FAM104BQ5XKR9 115 aa16.89■□□□□ 0.29
SDF4-202ENST00000360001 MORN3Q6PF18 240 aaPredicted RBP16.89■□□□□ 0.29
SDF4-202ENST00000360001 AMN1Q8IY45 258 aa16.89■□□□□ 0.29
SDF4-202ENST00000360001 NXPH4O95158 308 aa16.88■□□□□ 0.29
SDF4-202ENST00000360001 DMRTA1Q5VZB9 504 aa16.88■□□□□ 0.29
SDF4-202ENST00000360001 TMEM256Q8N2U0 113 aa16.88■□□□□ 0.29
SDF4-202ENST00000360001 ALKBH7Q9BT30 221 aaPredicted RBP16.88■□□□□ 0.29
SDF4-202ENST00000360001 COA6Q5JTJ3 125 aaKnown RBP16.86■□□□□ 0.29
SDF4-202ENST00000360001 EVI2AP22794 236 aa16.86■□□□□ 0.29
SDF4-202ENST00000360001 TMEM208Q9BTX3 173 aa16.86■□□□□ 0.29
SDF4-202ENST00000360001 CSNK1G2-AS1Q8NCQ2 148 aa16.85■□□□□ 0.29
SDF4-202ENST00000360001 RNF185Q96GF1 192 aa16.85■□□□□ 0.29
SDF4-202ENST00000360001 C1QTNF4Q9BXJ3 329 aa16.85■□□□□ 0.29
SDF4-202ENST00000360001 IGHV3OR16-12A0A075B7B8 117 aa16.84■□□□□ 0.29
SDF4-202ENST00000360001 Q0VG73 95 aa16.84■□□□□ 0.29
SDF4-202ENST00000360001 MRPL51Q4U2R6 128 aaKnown RBP16.84■□□□□ 0.29
SDF4-202ENST00000360001 MDFIQ99750 246 aa16.84■□□□□ 0.29
SDF4-202ENST00000360001 UBE2CO00762 179 aa16.83■□□□□ 0.28
SDF4-202ENST00000360001 RAB4AP20338 218 aa16.83■□□□□ 0.28
SDF4-202ENST00000360001 HOXA5P20719 270 aa16.83■□□□□ 0.28
SDF4-202ENST00000360001 CSTL1Q9H114 145 aa16.83■□□□□ 0.28
SDF4-202ENST00000360001 OR10J3Q5JRS4 329 aa16.82■□□□□ 0.28
SDF4-202ENST00000360001 SMIM15Q7Z3B0 74 aa16.82■□□□□ 0.28
SDF4-202ENST00000360001 C11orf72Q8NBR9 251 aa16.82■□□□□ 0.28
SDF4-202ENST00000360001 C18orf32Q8TCD1 76 aa16.82■□□□□ 0.28
SDF4-202ENST00000360001 KRTAP10-11P60412 298 aa16.82■□□□□ 0.28
SDF4-202ENST00000360001 EGFEM1PQ0D2K5 195 aa16.82■□□□□ 0.28
SDF4-202ENST00000360001 GOLT1BQ9Y3E0 138 aa16.82■□□□□ 0.28
SDF4-202ENST00000360001 U3KQK5 164 aa16.82■□□□□ 0.28
SDF4-202ENST00000360001 AZU1P20160 251 aa16.81■□□□□ 0.28
SDF4-202ENST00000360001 ZNF415Q09FC8 603 aa16.81■□□□□ 0.28
SDF4-202ENST00000360001 GSN-AS1Q9NRJ2 163 aa16.8■□□□□ 0.28
SDF4-202ENST00000360001 D6R8Y8 96 aa16.8■□□□□ 0.28
SDF4-202ENST00000360001 AP1S3Q96PC3 154 aa16.8■□□□□ 0.28
SDF4-202ENST00000360001 LINC00310P59036 64 aa16.79■□□□□ 0.28
SDF4-202ENST00000360001 IQCJQ1A5X6 159 aa16.79■□□□□ 0.28
SDF4-202ENST00000360001 C14orf178Q8N769 122 aaPredicted RBP16.79■□□□□ 0.28
SDF4-202ENST00000360001 SYT8Q8NBV8 401 aa16.79■□□□□ 0.28
SDF4-202ENST00000360001 ZNF705AQ6ZN79 300 aaPredicted RBP16.78■□□□□ 0.28
SDF4-202ENST00000360001 BAGE3Q86Y29 109 aa16.78■□□□□ 0.28
SDF4-202ENST00000360001 HIST3H2BBQ8N257 126 aa16.78■□□□□ 0.28
SDF4-202ENST00000360001 ZNF876PQ49A33 203 aa16.78■□□□□ 0.28
SDF4-202ENST00000360001 ORMDL3Q8N138 153 aa16.78■□□□□ 0.28
SDF4-202ENST00000360001 DPH3P1Q9H4G8 78 aa16.78■□□□□ 0.28
SDF4-202ENST00000360001 JPT2Q9H910 190 aa16.78■□□□□ 0.28
SDF4-202ENST00000360001 KIF25-AS1Q9Y6Z4 181 aa16.78■□□□□ 0.28
SDF4-202ENST00000360001 SMKR1H3BMG3 65 aa16.77■□□□□ 0.28
SDF4-202ENST00000360001 NUPR1O60356 82 aa16.77■□□□□ 0.28
SDF4-202ENST00000360001 CKS2P33552 79 aa16.77■□□□□ 0.28
SDF4-202ENST00000360001 PDZD11Q5EBL8 140 aa16.77■□□□□ 0.28
SDF4-202ENST00000360001 RCHY1Q96PM5 261 aa16.77■□□□□ 0.28
SDF4-202ENST00000360001 NCR2O95944 276 aa16.77■□□□□ 0.27
SDF4-202ENST00000360001 RNASE8Q8TDE3 154 aaKnown RBP16.77■□□□□ 0.27
SDF4-202ENST00000360001 IFITM10A6NMD0 228 aa16.76■□□□□ 0.27
SDF4-202ENST00000360001 SERF1AO75920 110 aa16.76■□□□□ 0.27
SDF4-202ENST00000360001 GAS8-AS1O95177 125 aa16.76■□□□□ 0.27
SDF4-202ENST00000360001 PRELID3AQ96N28 172 aa16.76■□□□□ 0.27
SDF4-202ENST00000360001 M0R2P5 195 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 IL17DQ8TAD2 202 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 DNAH3Q8TD57 4116 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 KIR2DL5BA0A0G2JN68 375 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 KIR2DL5BA0A0G2JPC4 375 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 G3V4G9 280 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 PPBPP02775 128 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 IGHV4-30-4P0DP06 118 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 LINC00315P59091 139 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 KIR2DL5AQ8N109 375 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 KIR2DL5BQ8NHK3 375 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 TMEM263Q8WUH6 116 aaKnown RBP16.75■□□□□ 0.27
SDF4-202ENST00000360001 SPXQ9BT56 116 aa16.75■□□□□ 0.27
SDF4-202ENST00000360001 PTH2Q96A98 100 aa16.74■□□□□ 0.27
SDF4-202ENST00000360001 A0A087WWL8 130 aa16.73■□□□□ 0.27
SDF4-202ENST00000360001 TRAV26-2A0A0B4J265 109 aa16.73■□□□□ 0.27
SDF4-202ENST00000360001 ESDP10768 282 aa16.73■□□□□ 0.27
SDF4-202ENST00000360001 POM121L12Q8N7R1 296 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms