RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TMEM75Q8N9X5 138 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 MGAMO43451 1857 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 IGKV1D-17A0A075B6S4 117 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 COLCA2A8K830 154 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 GATA1P15976 413 aaPredicted RBP7.71□□□□□ -1.18
CHD3-202ENST00000358181 HLA-DMBP28068 263 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 MRPL51Q4U2R6 128 aaKnown RBP7.71□□□□□ -1.18
CHD3-202ENST00000358181 RNF5Q99942 180 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 RNF126Q9BV68 326 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 ZNF492Q9P255 531 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 PRSS33Q8NF86 280 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 SRRM5B3KS81 715 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 IFI6P09912 130 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 C3orf79P0CE67 100 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 Q6ZVQ6 151 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 PRO1854Q9UHT4 67 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 IGKV2D-26A0A0A0MRZ7 120 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 RNF222A6NCQ9 220 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 UPK3BQ9BT76 320 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 SND1-IT1Q9HBX3 110 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 A0A0U1RQV1 116 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 FOXI2Q6ZQN5 318 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 DIRC1Q969H9 104 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 TSC2P49815 1807 aa7.7□□□□□ -1.18
CHD3-202ENST00000358181 SRSF2Q01130 221 aaKnown RBP7.69□□□□□ -1.18
CHD3-202ENST00000358181 J3QQQ9 107 aa7.69□□□□□ -1.18
CHD3-202ENST00000358181 CEND1Q8N111 149 aa7.69□□□□□ -1.18
CHD3-202ENST00000358181 OPRPNQ99935 248 aaPredicted RBP7.69□□□□□ -1.18
CHD3-202ENST00000358181 KLF2Q9Y5W3 355 aaPredicted RBP7.69□□□□□ -1.18
CHD3-202ENST00000358181 H3BMG7 143 aa7.69□□□□□ -1.18
CHD3-202ENST00000358181 NDUFS7O75251 213 aa7.69□□□□□ -1.18
CHD3-202ENST00000358181 BTCP35070 178 aa7.69□□□□□ -1.18
CHD3-202ENST00000358181 NTN5Q8WTR8 489 aaPredicted RBP7.69□□□□□ -1.18
CHD3-202ENST00000358181 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
CHD3-202ENST00000358181 LY6G6FQ5SQ64 297 aa7.69□□□□□ -1.18
CHD3-202ENST00000358181 SPAG11BQ08648 103 aa7.69□□□□□ -1.18
CHD3-202ENST00000358181 NACAE9PAV3 2078 aa7.68□□□□□ -1.18
CHD3-202ENST00000358181 CENPVL3A0A0U1RRI6 287 aa7.68□□□□□ -1.18
CHD3-202ENST00000358181 HIST2H2BDQ6DRA6 164 aa7.68□□□□□ -1.18
CHD3-202ENST00000358181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.68□□□□□ -1.18
CHD3-202ENST00000358181 PRSS46E5RG02 174 aa7.68□□□□□ -1.18
CHD3-202ENST00000358181 PPDPFLQ8WWR9 84 aa7.68□□□□□ -1.18
CHD3-202ENST00000358181 HILS1P60008 231 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 TPSG1Q9NRR2 321 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 KIR2DL5BA0A0G2JN68 375 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 KIR2DL5BA0A0G2JPC4 375 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 KIR2DL5AQ8N109 375 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 LYPD1Q8N2G4 141 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 SERP2Q8N6R1 65 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 C9JQL5 133 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 A0A0G2JRQ6 117 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 WDR83OSQ9Y284 106 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 FRMPD3Q5JV73 1810 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 MRPL35Q9NZE8 188 aaKnown RBP7.67□□□□□ -1.18
CHD3-202ENST00000358181 LY96Q9Y6Y9 160 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 NCOR1O75376 2440 aa7.67□□□□□ -1.18
CHD3-202ENST00000358181 DYSFO75923 2080 aa7.66□□□□□ -1.18
CHD3-202ENST00000358181 CFPP27918 469 aa7.66□□□□□ -1.18
CHD3-202ENST00000358181 DENND4AQ7Z401 1863 aa7.66□□□□□ -1.18
CHD3-202ENST00000358181 SMIM20Q8N5G0 67 aa7.66□□□□□ -1.18
CHD3-202ENST00000358181 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
CHD3-202ENST00000358181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.66□□□□□ -1.185e-6■■■□□ 16.7
CHD3-202ENST00000358181 H0YIZ8 118 aa7.66□□□□□ -1.18
CHD3-202ENST00000358181 INAFM1C9JVW0 142 aa7.65□□□□□ -1.18
CHD3-202ENST00000358181 TNRC6BQ9UPQ9 1833 aaKnown RBP7.65□□□□□ -1.18
CHD3-202ENST00000358181 THSD7BQ9C0I4 1608 aa7.65□□□□□ -1.18
CHD3-202ENST00000358181 TRAV26-1A0A087WT03 109 aa7.65□□□□□ -1.18
CHD3-202ENST00000358181 NMSQ5H8A3 153 aa7.65□□□□□ -1.18
CHD3-202ENST00000358181 GRNP28799 593 aaKnown RBP7.65□□□□□ -1.19
CHD3-202ENST00000358181 SH2D6Q7Z4S9 175 aa7.65□□□□□ -1.19
CHD3-202ENST00000358181 DIAPH2-AS1Q14236 149 aa7.65□□□□□ -1.19
CHD3-202ENST00000358181 SPINK1P00995 79 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 RPL39LQ96EH5 51 aaKnown RBP7.64□□□□□ -1.19
CHD3-202ENST00000358181 ZNF407Q9C0G0 2248 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 PLXNA3P51805 1871 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 COX7BP24311 80 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 AJUBAQ96IF1 538 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 HEATR5AQ86XA9 2040 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 WI2-2373I1.2A0A1W2PRP0 233 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 RBAKDNA6NC62 111 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 IGLV2-8P01709 118 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 IGLL1P15814 213 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 MRPL55Q7Z7F7 128 aaKnown RBP7.64□□□□□ -1.19
CHD3-202ENST00000358181 PNRC2Q9NPJ4 139 aaKnown RBP7.64□□□□□ -1.19
CHD3-202ENST00000358181 USF3Q68DE3 2245 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 ABCA1O95477 2261 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 LOXP28300 417 aaPredicted RBP7.64□□□□□ -1.19
CHD3-202ENST00000358181 Q6ZVH6 145 aa7.64□□□□□ -1.19
CHD3-202ENST00000358181 DEFB131BA0A096LNP1 70 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 IGLV2-11P01706 119 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 SLPIP03973 132 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 ETDBQ3ZM63 59 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 ZNF493Q6ZR52 646 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 ROS1P08922 2347 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 ODF3L1Q8IXM7 274 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 TMEM263Q8WUH6 116 aaKnown RBP7.63□□□□□ -1.19
CHD3-202ENST00000358181 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 WNK2Q9Y3S1 2297 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 PLXNA4Q9HCM2 1894 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 B3GALT5-AS1P59052 145 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms