RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 VPREB1P12018 145 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 PIK3CD-AS1Q5SR53 167 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 THSD7BQ9C0I4 1608 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 TRBV7-3A0A075B6L6 115 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 DYNAPQ8N1N2 210 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 RHPN1-AS1Q9BWJ2 59 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 TRBV10-1A0A0K0K1A3 114 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 K7EQD1 137 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 IGLV3-1P01715 115 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 C16orf54Q6UWD8 224 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 NTN5Q8WTR8 489 aaPredicted RBP6.37□□□□□ -1.39
HTT-201ENST00000355072 TINCRA0A1B0GVN0 87 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 PLA2G2FQ9BZM2 168 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 Q9H8V8 135 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 IGHV1-18A0A0C4DH31 117 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 BUB3O43684 328 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 SPRY4Q9C004 299 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 ODF1Q14990 250 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 C1orf147Q96MC9 270 aaPredicted RBP6.37□□□□□ -1.39
HTT-201ENST00000355072 IGKV1D-17A0A075B6S4 117 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 A0A0J9YX75 114 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 LEAP2Q969E1 77 aa6.37□□□□□ -1.39
HTT-201ENST00000355072 PSCAO43653 123 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 RFPL3SP0C7P2 107 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 DUX4L9Q6RFH8 374 aaPredicted RBP6.36□□□□□ -1.39
HTT-201ENST00000355072 MIAQ16674 131 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 DKK2Q9UBU2 259 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 IGKV3D-20A0A0C4DH25 116 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 STPG1Q5TH74 334 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 SETD2Q9BYW2 2564 aaPredicted RBP6.36□□□□□ -1.39
HTT-201ENST00000355072 FSTL3O95633 263 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 A0A1B0GW54 56 aa6.36□□□□□ -1.39
HTT-201ENST00000355072 IGHV1-46P01743 117 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 FAM19A3Q7Z5A8 133 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 IGFL3Q6UXB1 125 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 Q8TAT8 98 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 COLQQ9Y215 455 aaPredicted RBP6.35□□□□□ -1.39
HTT-201ENST00000355072 TMEM89A2RUT3 159 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 K7ENP7 123 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 IGHV3-48P01763 117 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 COL4A6Q14031 1691 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 VOPP1Q96AW1 172 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 Q6ZSR3 168 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 RNASE8Q8TDE3 154 aaKnown RBP6.35□□□□□ -1.39
HTT-201ENST00000355072 UPK3BQ9BT76 320 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 FLVCR1-AS1Q8TAF5 88 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 PSPNO60542 156 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 COL4A1P02462 1669 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 IGKV1D-8A0A087WSZ0 117 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 COX7A2LO14548 114 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 ZNF726P1Q15940 193 aa6.35□□□□□ -1.39
HTT-201ENST00000355072 IGKV1-12A0A0C4DH73 117 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 IGKV1D-12P01611 117 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 ELANEP08246 267 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 C16orf74Q96GX8 76 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 LINC01356Q8N9X3 169 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 K7ERJ3 54 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 SPTBN4Q9H254 2564 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 PRR19A6NJB7 356 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 CELA3BP08861 270 aa6.34□□□□□ -1.39
HTT-201ENST00000355072 RBX1P62877 108 aa6.34□□□□□ -1.4
HTT-201ENST00000355072 NSUN5P1Q3KNT7 163 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 SND1-IT1Q9HBX3 110 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 A0A0U1RQV1 116 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 A0A1W2PRX2 142 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 COX7CP15954 63 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 TRBV12-3P01733 135 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 K7EN84 100 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 NPBQ8NG41 125 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 IGKV3-20P01619 116 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 GP9P14770 177 aa6.33□□□□□ -1.4
HTT-201ENST00000355072 RPL18AQ02543 176 aaKnown RBP6.33□□□□□ -1.4
HTT-201ENST00000355072 FHL1Q13642 323 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 DEFB124Q8NES8 71 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 GAFA1Q96PS6 74 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 LINC01565O15544 149 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 IGHV3OR16-13A0A075B7E8 117 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 IGHV3-74A0A0B4J1X5 117 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 NAA38Q9BRA0 125 aaKnown RBP6.32□□□□□ -1.4
HTT-201ENST00000355072 NXPH4O95158 308 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 AMTNQ6UX39 209 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 C8orf49Q96NF6 230 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 IBA57-AS1B1ANH7 110 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 FAM201AQ5SY85 155 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 BAALCQ8WXS3 180 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 TEX22C9J3V5 150 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 C14orf177Q52M58 125 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 UBE2D2P62837 147 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 CSRP2Q16527 193 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 FAM219BQ5XKK7 198 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 FAM110AQ9BQ89 295 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
HTT-201ENST00000355072 SAA4P35542 130 aa6.31□□□□□ -1.4
HTT-201ENST00000355072 C17orf82Q86X59 251 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms