RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 EMP1P54849 157 aa16.37■□□□□ 0.21
TRIM3-201ENST00000345851 NEXN-AS1Q8NBZ9 246 aa16.37■□□□□ 0.21
TRIM3-201ENST00000345851 RNF5Q99942 180 aa16.37■□□□□ 0.21
TRIM3-201ENST00000345851 LY6LH3BQJ8 138 aa16.36■□□□□ 0.21
TRIM3-201ENST00000345851 MYO18BQ8IUG5 2567 aa16.35■□□□□ 0.21
TRIM3-201ENST00000345851 UBE2D3P61077 147 aa16.35■□□□□ 0.21
TRIM3-201ENST00000345851 UBE2D2P62837 147 aa16.35■□□□□ 0.21
TRIM3-201ENST00000345851 RPL39LQ96EH5 51 aaKnown RBP16.35■□□□□ 0.21
TRIM3-201ENST00000345851 C5orf64Q2M2E5 130 aa16.35■□□□□ 0.21
TRIM3-201ENST00000345851 BAALCQ8WXS3 180 aa16.35■□□□□ 0.21
TRIM3-201ENST00000345851 RASL10AQ92737 203 aa16.35■□□□□ 0.21
TRIM3-201ENST00000345851 C19orf84I3L1E1 186 aa16.34■□□□□ 0.21
TRIM3-201ENST00000345851 M0R381 172 aa16.34■□□□□ 0.21
TRIM3-201ENST00000345851 ANKRD29Q8N6D5 301 aa16.34■□□□□ 0.21
TRIM3-201ENST00000345851 USP9XQ93008 2570 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-201ENST00000345851 CD7P09564 240 aa16.33■□□□□ 0.21
TRIM3-201ENST00000345851 TOMM6Q96B49 74 aa16.33■□□□□ 0.21
TRIM3-201ENST00000345851 A8MWV9 139 aa16.33■□□□□ 0.2
TRIM3-201ENST00000345851 ANXA2RQ3ZCQ2 193 aa16.33■□□□□ 0.2
TRIM3-201ENST00000345851 C2orf66Q6UXQ4 117 aa16.33■□□□□ 0.2
TRIM3-201ENST00000345851 HIF1ANQ9NWT6 349 aa16.33■□□□□ 0.2
TRIM3-201ENST00000345851 ZNF688P0C7X2 276 aa16.32■□□□□ 0.2
TRIM3-201ENST00000345851 SCGB1C2P0DMR2 95 aa16.32■□□□□ 0.2
TRIM3-201ENST00000345851 SUMO2P61956 95 aaKnown RBP16.32■□□□□ 0.2
TRIM3-201ENST00000345851 ORMDL2Q53FV1 153 aa16.32■□□□□ 0.2
TRIM3-201ENST00000345851 NDUFA11Q86Y39 141 aa16.32■□□□□ 0.2
TRIM3-201ENST00000345851 B5MCH6 92 aa16.32■□□□□ 0.2
TRIM3-201ENST00000345851 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.32■□□□□ 0.2
TRIM3-201ENST00000345851 ZFAND6Q6FIF0 208 aa16.32■□□□□ 0.2
TRIM3-201ENST00000345851 USP24Q9UPU5 2620 aa16.31■□□□□ 0.2
TRIM3-201ENST00000345851 DPM3Q9P2X0 92 aa16.31■□□□□ 0.2
TRIM3-201ENST00000345851 TEX29Q8N6K0 151 aa16.31■□□□□ 0.2
TRIM3-201ENST00000345851 OR11H6Q8NGC7 330 aa16.31■□□□□ 0.2
TRIM3-201ENST00000345851 PRTN3P24158 256 aa16.3■□□□□ 0.2
TRIM3-201ENST00000345851 COX6B1P14854 86 aa16.3■□□□□ 0.2
TRIM3-201ENST00000345851 LYRM7Q5U5X0 104 aa16.29■□□□□ 0.2
TRIM3-201ENST00000345851 Q6ZS46 218 aa16.29■□□□□ 0.2
TRIM3-201ENST00000345851 UBTD1Q9HAC8 227 aa16.29■□□□□ 0.2
TRIM3-201ENST00000345851 MGPP08493 103 aa16.29■□□□□ 0.2
TRIM3-201ENST00000345851 C14orf178Q8N769 122 aaPredicted RBP16.29■□□□□ 0.2
TRIM3-201ENST00000345851 SLC50A1Q9BRV3 221 aa16.29■□□□□ 0.2
TRIM3-201ENST00000345851 BUB3O43684 328 aa16.28■□□□□ 0.2
TRIM3-201ENST00000345851 NPBQ8NG41 125 aa16.28■□□□□ 0.2
TRIM3-201ENST00000345851 ITLN2Q8WWU7 325 aaPredicted RBP16.28■□□□□ 0.2
TRIM3-201ENST00000345851 CENPEQ02224 2701 aa16.28■□□□□ 0.2
TRIM3-201ENST00000345851 EPG5Q9HCE0 2579 aa16.27■□□□□ 0.2
TRIM3-201ENST00000345851 IGF1P05019 195 aa16.27■□□□□ 0.2
TRIM3-201ENST00000345851 CFC1BP0CG36 223 aa16.27■□□□□ 0.2
TRIM3-201ENST00000345851 CFC1P0CG37 223 aa16.27■□□□□ 0.2
TRIM3-201ENST00000345851 GAGE5Q13069 117 aa16.27■□□□□ 0.2
TRIM3-201ENST00000345851 GAGE6Q13070 117 aa16.27■□□□□ 0.2
TRIM3-201ENST00000345851 PRR9Q5T870 116 aa16.27■□□□□ 0.2
TRIM3-201ENST00000345851 CELSR2Q9HCU4 2923 aa16.27■□□□□ 0.19
TRIM3-201ENST00000345851 A0A0J9YY99 117 aa16.27■□□□□ 0.19
TRIM3-201ENST00000345851 C11orf86A6NJI1 115 aa16.27■□□□□ 0.19
TRIM3-201ENST00000345851 FAM208BQ5VWN6 2430 aa16.26■□□□□ 0.19
TRIM3-201ENST00000345851 RBAKDNA6NC62 111 aa16.26■□□□□ 0.19
TRIM3-201ENST00000345851 SCGB2A1O75556 95 aa16.26■□□□□ 0.19
TRIM3-201ENST00000345851 DUSP14O95147 198 aaKnown RBP16.26■□□□□ 0.19
TRIM3-201ENST00000345851 CLEC3BP05452 202 aa16.26■□□□□ 0.19
TRIM3-201ENST00000345851 RAX2Q96IS3 184 aa16.26■□□□□ 0.19
TRIM3-201ENST00000345851 H7C2G1 150 aa16.25■□□□□ 0.19
TRIM3-201ENST00000345851 C11orf71Q6IPW1 123 aa16.25■□□□□ 0.19
TRIM3-201ENST00000345851 TRAV8-2A0A0B4J237 113 aa16.25■□□□□ 0.19
TRIM3-201ENST00000345851 CRIP2P52943 208 aaPredicted RBP16.25■□□□□ 0.19
TRIM3-201ENST00000345851 C15orf32Q32M92 178 aa16.25■□□□□ 0.19
TRIM3-201ENST00000345851 TRBV20-1A0A075B6N2 111 aa16.24■□□□□ 0.19
TRIM3-201ENST00000345851 C9JAW5 83 aa16.24■□□□□ 0.19
TRIM3-201ENST00000345851 IGHV4-4A0A075B6R2 117 aa16.24■□□□□ 0.19
TRIM3-201ENST00000345851 S100A4P26447 101 aaKnown RBP16.24■□□□□ 0.19
TRIM3-201ENST00000345851 TRPT1Q86TN4 253 aaKnown RBP16.24■□□□□ 0.19
TRIM3-201ENST00000345851 C10orf126Q8N4M7 172 aa16.24■□□□□ 0.19
TRIM3-201ENST00000345851 ZFAND3Q9H8U3 227 aa16.24■□□□□ 0.19
TRIM3-201ENST00000345851 ZNF462Q96JM2 2506 aa16.24■□□□□ 0.19
TRIM3-201ENST00000345851 CRYGDP07320 174 aa16.23■□□□□ 0.19
TRIM3-201ENST00000345851 NHLRC4P0CG21 123 aaPredicted RBP16.23■□□□□ 0.19
TRIM3-201ENST00000345851 TSPEAR-AS2P59090 65 aa16.23■□□□□ 0.19
TRIM3-201ENST00000345851 ECSCRQ19T08 205 aa16.23■□□□□ 0.19
TRIM3-201ENST00000345851 AJUBAQ96IF1 538 aa16.23■□□□□ 0.19
TRIM3-201ENST00000345851 VCX2Q9H322 139 aa16.23■□□□□ 0.19
TRIM3-201ENST00000345851 SLC25A20O43772 301 aa16.22■□□□□ 0.19
TRIM3-201ENST00000345851 PRB1P04280 392 aa16.22■□□□□ 0.19
TRIM3-201ENST00000345851 ARL3P36405 182 aa16.22■□□□□ 0.19
TRIM3-201ENST00000345851 SBSPONQ8IVN8 264 aa16.22■□□□□ 0.19
TRIM3-201ENST00000345851 IGHV3-30P01768 117 aa16.21■□□□□ 0.19
TRIM3-201ENST00000345851 IGHV3-30-5P0DP03 117 aa16.21■□□□□ 0.19
TRIM3-201ENST00000345851 RNF223E7ERA6 249 aa16.21■□□□□ 0.19
TRIM3-201ENST00000345851 TMEM262E9PQX1 116 aa16.21■□□□□ 0.19
TRIM3-201ENST00000345851 TMEM170BQ5T4T1 132 aa16.21■□□□□ 0.19
TRIM3-201ENST00000345851 CLEC19AQ6UXS0 136 aa16.21■□□□□ 0.19
TRIM3-201ENST00000345851 CITED1Q99966 193 aa16.21■□□□□ 0.19
TRIM3-201ENST00000345851 PRO1854Q9UHT4 67 aa16.2■□□□□ 0.18
TRIM3-201ENST00000345851 IGLV4-69A0A075B6H9 119 aa16.2■□□□□ 0.18
TRIM3-201ENST00000345851 TRAV4A0A0B4J268 109 aa16.2■□□□□ 0.18
TRIM3-201ENST00000345851 CLPSL1A2RUU4 121 aa16.2■□□□□ 0.18
TRIM3-201ENST00000345851 DEFB1P60022 68 aa16.2■□□□□ 0.18
TRIM3-201ENST00000345851 HERVK_113P61574 105 aa16.2■□□□□ 0.18
TRIM3-201ENST00000345851 DPH3P1Q9H4G8 78 aa16.2■□□□□ 0.18
TRIM3-201ENST00000345851 PHLDA3Q9Y5J5 127 aa16.2■□□□□ 0.18
TRIM3-201ENST00000345851 CRLF1O75462 422 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms