RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 IGLV1-51P01701 117 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 CD7P09564 240 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 GATA1P15976 413 aaPredicted RBP9.99□□□□□ -0.81
CDC42-202ENST00000344548 PMCHP20382 165 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 PMCHL1Q16048 86 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 SCRT2Q9NQ03 307 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 SMIM6P0DI80 62 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 S100A4P26447 101 aaKnown RBP9.99□□□□□ -0.81
CDC42-202ENST00000344548 ASIPP42127 132 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 SPANXN1Q5VSR9 72 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 KCNS1Q96KK3 526 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 FBN1P35555 2871 aaKnown RBP9.99□□□□□ -0.81
CDC42-202ENST00000344548 IGHV4-4A0A075B6R2 117 aa9.98□□□□□ -0.81
CDC42-202ENST00000344548 TRAV25A0A0B4J276 109 aa9.98□□□□□ -0.81
CDC42-202ENST00000344548 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
CDC42-202ENST00000344548 LINC00482Q8N8I6 264 aa9.98□□□□□ -0.81
CDC42-202ENST00000344548 U3KQK5 164 aa9.98□□□□□ -0.81
CDC42-202ENST00000344548 TRAV26-2A0A0B4J265 109 aa9.98□□□□□ -0.81
CDC42-202ENST00000344548 Q8N1Y9 231 aa9.98□□□□□ -0.81
CDC42-202ENST00000344548 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
CDC42-202ENST00000344548 NPYP01303 97 aa9.97□□□□□ -0.81
CDC42-202ENST00000344548 AMTP48728 403 aa9.97□□□□□ -0.81
CDC42-202ENST00000344548 TDRG1Q3Y452 100 aa9.97□□□□□ -0.81
CDC42-202ENST00000344548 SAMD10Q9BYL1 202 aa9.97□□□□□ -0.81
CDC42-202ENST00000344548 JPT2Q9H910 190 aa9.97□□□□□ -0.81
CDC42-202ENST00000344548 LOC389332A0A1B0GUA5 103 aa9.96□□□□□ -0.82
CDC42-202ENST00000344548 HTN1P15515 57 aa9.96□□□□□ -0.82
CDC42-202ENST00000344548 TSPOP30536 169 aa9.96□□□□□ -0.82
CDC42-202ENST00000344548 DNLZQ5SXM8 178 aa9.96□□□□□ -0.82
CDC42-202ENST00000344548 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
CDC42-202ENST00000344548 C19orf73Q9NVV2 129 aa9.96□□□□□ -0.82
CDC42-202ENST00000344548 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.82
CDC42-202ENST00000344548 IGHV3-16A0A0C4DH30 117 aa9.95□□□□□ -0.82
CDC42-202ENST00000344548 PF4P02776 101 aa9.95□□□□□ -0.82
CDC42-202ENST00000344548 CKS2P33552 79 aa9.95□□□□□ -0.82
CDC42-202ENST00000344548 IFI27P40305 119 aaPredicted RBP9.95□□□□□ -0.82
CDC42-202ENST00000344548 JOSD1Q15040 202 aaPredicted RBP9.95□□□□□ -0.82
CDC42-202ENST00000344548 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
CDC42-202ENST00000344548 IGHV1OR15-1A0A075B7D0 117 aa9.95□□□□□ -0.82
CDC42-202ENST00000344548 PCP4L1A6NKN8 68 aa9.95□□□□□ -0.82
CDC42-202ENST00000344548 LINC00614P0C842 121 aa9.95□□□□□ -0.82
CDC42-202ENST00000344548 C14orf178Q8N769 122 aaPredicted RBP9.95□□□□□ -0.82
CDC42-202ENST00000344548 CITED1Q99966 193 aa9.95□□□□□ -0.82
CDC42-202ENST00000344548 HSBP1O75506 76 aa9.94□□□□□ -0.82
CDC42-202ENST00000344548 LINC00173Q6ZV60 143 aa9.94□□□□□ -0.82
CDC42-202ENST00000344548 OR11H12B2RN74 326 aa9.94□□□□□ -0.82
CDC42-202ENST00000344548 CACNG7P62955 275 aa9.94□□□□□ -0.82
CDC42-202ENST00000344548 IGHV1-24A0A0C4DH33 117 aa9.93□□□□□ -0.82
CDC42-202ENST00000344548 BEAN1Q3B7T3 259 aa9.93□□□□□ -0.82
CDC42-202ENST00000344548 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
CDC42-202ENST00000344548 XCL2Q9UBD3 114 aa9.93□□□□□ -0.82
CDC42-202ENST00000344548 MED14OSP0DP75 135 aa9.93□□□□□ -0.82
CDC42-202ENST00000344548 TRPT1Q86TN4 253 aaKnown RBP9.93□□□□□ -0.82
CDC42-202ENST00000344548 LINC00315P59091 139 aa9.92□□□□□ -0.82
CDC42-202ENST00000344548 KIF25-AS1Q9Y6Z4 181 aa9.92□□□□□ -0.82
CDC42-202ENST00000344548 NXPH4O95158 308 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 TNFRSF6BO95407 300 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 KRTAP24-1Q3LI83 254 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 NRACQ8N912 160 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 Q8N976 141 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 A0A096LNJ9 63 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 CBY3A6NI87 242 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 GIG44P09565 113 aaPredicted RBP9.91□□□□□ -0.82
CDC42-202ENST00000344548 STHQ8IWL8 128 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 PRSS3P2Q8NHM4 247 aa9.91□□□□□ -0.82
CDC42-202ENST00000344548 A0A087WWL8 130 aa9.9□□□□□ -0.82
CDC42-202ENST00000344548 KRTDAPP60985 99 aa9.9□□□□□ -0.82
CDC42-202ENST00000344548 CHCHD1Q96BP2 118 aaKnown RBP9.9□□□□□ -0.82
CDC42-202ENST00000344548 STAB1Q9NY15 2570 aa9.9□□□□□ -0.82
CDC42-202ENST00000344548 MAST4O15021 2626 aa9.9□□□□□ -0.82
CDC42-202ENST00000344548 C3orf79P0CE67 100 aa9.9□□□□□ -0.83
CDC42-202ENST00000344548 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.83
CDC42-202ENST00000344548 C1orf158Q8N1D5 194 aa9.9□□□□□ -0.83
CDC42-202ENST00000344548 SCGB1D1O95968 90 aa9.89□□□□□ -0.83
CDC42-202ENST00000344548 AZU1P20160 251 aa9.89□□□□□ -0.83
CDC42-202ENST00000344548 RPL35AP18077 110 aaKnown RBP9.89□□□□□ -0.83
CDC42-202ENST00000344548 SMIM15Q7Z3B0 74 aa9.89□□□□□ -0.83
CDC42-202ENST00000344548 OR2K2Q8NGT1 345 aa9.89□□□□□ -0.83
CDC42-202ENST00000344548 RPL39LQ96EH5 51 aaKnown RBP9.89□□□□□ -0.83
CDC42-202ENST00000344548 DPH3P1Q9H4G8 78 aa9.89□□□□□ -0.83
CDC42-202ENST00000344548 GSN-AS1Q9NRJ2 163 aa9.89□□□□□ -0.83
CDC42-202ENST00000344548 AP5S1Q9NUS5 200 aa9.89□□□□□ -0.83
CDC42-202ENST00000344548 IGHV3OR16-12A0A075B7B8 117 aa9.88□□□□□ -0.83
CDC42-202ENST00000344548 PPBPP02775 128 aa9.88□□□□□ -0.83
CDC42-202ENST00000344548 MGPP08493 103 aa9.88□□□□□ -0.83
CDC42-202ENST00000344548 DEFB125Q8N687 156 aa9.88□□□□□ -0.83
CDC42-202ENST00000344548 RASL10AQ92737 203 aa9.88□□□□□ -0.83
CDC42-202ENST00000344548 CLUHP3Q96NS8 147 aa9.88□□□□□ -0.83
CDC42-202ENST00000344548 LINC01587Q99440 93 aa9.88□□□□□ -0.83
CDC42-202ENST00000344548 IGLV2-18A0A075B6J9 118 aa9.87□□□□□ -0.83
CDC42-202ENST00000344548 FA2HQ7L5A8 372 aa9.87□□□□□ -0.83
CDC42-202ENST00000344548 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
CDC42-202ENST00000344548 ZNF876PQ49A33 203 aa9.87□□□□□ -0.83
CDC42-202ENST00000344548 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
CDC42-202ENST00000344548 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
CDC42-202ENST00000344548 MCRIP2Q9BUT9 160 aaKnown RBP9.87□□□□□ -0.83
CDC42-202ENST00000344548 CRYGDP07320 174 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms