RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 FOXI2Q6ZQN5 318 aa14.8□□□□□ -0.04
NPLOC4-201ENST00000331134 P0C879 139 aa14.79□□□□□ -0.04
NPLOC4-201ENST00000331134 TAL2Q16559 108 aa14.79□□□□□ -0.04
NPLOC4-201ENST00000331134 PKD1L2Q7Z442 2459 aa14.79□□□□□ -0.04
NPLOC4-201ENST00000331134 NUP210Q8TEM1 1887 aaPredicted RBP14.79□□□□□ -0.04
NPLOC4-201ENST00000331134 CFHR3Q02985 330 aa14.79□□□□□ -0.04
NPLOC4-201ENST00000331134 I3L2K1 104 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 C15orf53Q8NAA6 179 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 PTH2Q96A98 100 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 DKK4Q9UBT3 224 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 LAMTOR3Q9UHA4 124 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 FAM223BA6NKX1 122 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 FAM223AQ8IWN6 122 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 LEPROTO15243 131 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 GRNP28799 593 aaKnown RBP14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 UBE2E1P51965 193 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 CARD19Q96LW7 228 aa14.78□□□□□ -0.04
NPLOC4-201ENST00000331134 LAMA2P24043 3122 aaKnown RBP14.77□□□□□ -0.04
NPLOC4-201ENST00000331134 BOD1L2Q8IYS8 172 aa14.77□□□□□ -0.04
NPLOC4-201ENST00000331134 GAGE12JA6NER3 117 aa14.77□□□□□ -0.05
NPLOC4-201ENST00000331134 GAGE4Q13068 117 aa14.77□□□□□ -0.05
NPLOC4-201ENST00000331134 GAGE5Q13069 117 aa14.77□□□□□ -0.05
NPLOC4-201ENST00000331134 TMEM141Q96I45 108 aa14.77□□□□□ -0.05
NPLOC4-201ENST00000331134 IFITM1P13164 125 aa14.76□□□□□ -0.05
NPLOC4-201ENST00000331134 JMJD1CQ15652 2540 aa14.76□□□□□ -0.05
NPLOC4-201ENST00000331134 LAMA3Q16787 3333 aa14.76□□□□□ -0.05
NPLOC4-201ENST00000331134 I3L3M4 83 aa14.76□□□□□ -0.05
NPLOC4-201ENST00000331134 DEFB130BP0DP73 79 aa14.76□□□□□ -0.05
NPLOC4-201ENST00000331134 DEFB130AP0DP74 79 aa14.76□□□□□ -0.05
NPLOC4-201ENST00000331134 IGHV1OR15-1A0A075B7D0 117 aa14.75□□□□□ -0.05
NPLOC4-201ENST00000331134 CFC1BP0CG36 223 aa14.75□□□□□ -0.05
NPLOC4-201ENST00000331134 CFC1P0CG37 223 aa14.75□□□□□ -0.05
NPLOC4-201ENST00000331134 KAAG1Q9UBP8 84 aa14.75□□□□□ -0.05
NPLOC4-201ENST00000331134 C1orf229Q6ZS94 237 aaPredicted RBP14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 C3orf56Q8N813 242 aa14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 DPH3Q96FX2 82 aa14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 FN1P02751 2386 aaKnown RBP14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 GAGE7O76087 117 aa14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 GAGE12FP0CL80 117 aa14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 GAGE12GP0CL81 117 aa14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 GAGE12IP0CL82 117 aa14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 ZNRF2Q8NHG8 242 aa14.74□□□□□ -0.05
NPLOC4-201ENST00000331134 CTSGP08311 255 aa14.73□□□□□ -0.05
NPLOC4-201ENST00000331134 C20orf78Q9BR46 151 aa14.73□□□□□ -0.05
NPLOC4-201ENST00000331134 NCKAP5O14513 1909 aa14.73□□□□□ -0.05
NPLOC4-201ENST00000331134 A4D1N5 150 aa14.73□□□□□ -0.05
NPLOC4-201ENST00000331134 NXPH4O95158 308 aa14.73□□□□□ -0.05
NPLOC4-201ENST00000331134 RPL39P62891 51 aaKnown RBP14.73□□□□□ -0.05
NPLOC4-201ENST00000331134 COL4A4P53420 1690 aaPredicted RBP14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 B4DSR2 109 aa14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 GNLYP22749 145 aa14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 HTTP42858 3142 aa14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 A0A0J9YXV3 536 aa14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 IGKV1D-37A0A075B6S9 117 aa14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 C19orf71A6NCJ1 209 aa14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 NSUN5P1Q3KNT7 163 aa14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 ZNF493Q6ZR52 646 aa14.72□□□□□ -0.05
NPLOC4-201ENST00000331134 ABCA12Q86UK0 2595 aa14.71□□□□□ -0.05
NPLOC4-201ENST00000331134 ZFYVE26Q68DK2 2539 aa14.71□□□□□ -0.05
NPLOC4-201ENST00000331134 ODF1Q14990 250 aa14.71□□□□□ -0.05
NPLOC4-201ENST00000331134 A0A1B0GXF2 115 aa14.71□□□□□ -0.06
NPLOC4-201ENST00000331134 SMIM20Q8N5G0 67 aa14.7□□□□□ -0.06
NPLOC4-201ENST00000331134 CTRLP40313 264 aa14.7□□□□□ -0.06
NPLOC4-201ENST00000331134 G3V4G9 280 aa14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 INSP01308 110 aa14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 RBAKDNA6NC62 111 aa14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 RBX1P62877 108 aa14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 TRAV26-1A0A087WT03 109 aa14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 CITED1Q99966 193 aa14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 TINCRA0A1B0GVN0 87 aa14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 A0A1W2PNU3 283 aaPredicted RBP14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 CRYBA4P53673 196 aa14.69□□□□□ -0.06
NPLOC4-201ENST00000331134 NDUFA4O00483 81 aa14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 IGLV2-23P01705 113 aa14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 IGHV7-81A0A0B4J1V7 117 aa14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 IGHV1-69DA0A0B4J2H0 117 aa14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 IGHV1-69P01742 117 aa14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 TCTEX1D4Q5JR98 221 aa14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 IGKV2-29A2NJV5 120 aaPredicted RBP14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 TEX22C9J3V5 150 aa14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 GAGE6Q13070 117 aa14.68□□□□□ -0.06
NPLOC4-201ENST00000331134 SHISA9B4DS77 424 aa14.67□□□□□ -0.06
NPLOC4-201ENST00000331134 C2orf16Q68DN1 1984 aa14.67□□□□□ -0.06
NPLOC4-201ENST00000331134 BUB3O43684 328 aa14.67□□□□□ -0.06
NPLOC4-201ENST00000331134 IGLV11-55A0A075B6I3 123 aa14.67□□□□□ -0.06
NPLOC4-201ENST00000331134 TRAV12-1A0A0B4J245 112 aa14.67□□□□□ -0.06
NPLOC4-201ENST00000331134 DAND5Q8N907 189 aa14.67□□□□□ -0.06
NPLOC4-201ENST00000331134 IGFL3Q6UXB1 125 aa14.66□□□□□ -0.06
NPLOC4-201ENST00000331134 SEM1Q6ZVN7 128 aa14.66□□□□□ -0.06
NPLOC4-201ENST00000331134 ZNF80P51504 273 aaPredicted RBP14.66□□□□□ -0.06
NPLOC4-201ENST00000331134 CR1LQ2VPA4 569 aa14.66□□□□□ -0.06
NPLOC4-201ENST00000331134 MBD6Q96DN6 1003 aa14.66□□□□□ -0.06
NPLOC4-201ENST00000331134 MKI67P46013 3256 aaKnown RBP14.66□□□□□ -0.06
NPLOC4-201ENST00000331134 TEN1Q86WV5 123 aa14.65□□□□□ -0.06
NPLOC4-201ENST00000331134 MUSTN1Q8IVN3 82 aa14.65□□□□□ -0.06
NPLOC4-201ENST00000331134 ZNF106Q9H2Y7 1883 aaKnown RBP14.65□□□□□ -0.06
NPLOC4-201ENST00000331134 PRSS47A8MTI9 375 aa14.65□□□□□ -0.06
NPLOC4-201ENST00000331134 ANKRD29Q8N6D5 301 aa14.65□□□□□ -0.06
NPLOC4-201ENST00000331134 ANKRD11Q6UB99 2663 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms