RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.6□□□□□ -0.551e-6■■■□□ 15.3
SCAP-202ENST00000320017 RNF125Q96EQ8 232 aa11.6□□□□□ -0.55
SCAP-202ENST00000320017 LRRK2Q5S007 2527 aa11.6□□□□□ -0.55
SCAP-202ENST00000320017 CFC1BP0CG36 223 aa11.6□□□□□ -0.55
SCAP-202ENST00000320017 CFC1P0CG37 223 aa11.6□□□□□ -0.55
SCAP-202ENST00000320017 ZNF833PQ6ZTB9 187 aa11.6□□□□□ -0.55
SCAP-202ENST00000320017 CD7P09564 240 aa11.59□□□□□ -0.55
SCAP-202ENST00000320017 SPRY2O43597 315 aa11.59□□□□□ -0.55
SCAP-202ENST00000320017 TMEM170BQ5T4T1 132 aa11.59□□□□□ -0.55
SCAP-202ENST00000320017 Q6ZS46 218 aa11.59□□□□□ -0.55
SCAP-202ENST00000320017 RASL10AQ92737 203 aa11.59□□□□□ -0.55
SCAP-202ENST00000320017 RAI1Q7Z5J4 1906 aaPredicted RBP11.59□□□□□ -0.55
SCAP-202ENST00000320017 ERCC8Q13216 396 aa11.58□□□□□ -0.55
SCAP-202ENST00000320017 TRBV6-1A0A0K0K1D8 114 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 IGKV1-17P01599 117 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 C5orf47Q569G3 176 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 FAM236AA0A1B0GUQ0 79 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 FAM236BA0A1B0GV22 79 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 H3BMM0 161 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 IGLC6P0CF74 106 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 UBE2WQ96B02 151 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 MSRB2Q9Y3D2 182 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 POLQO75417 2590 aa11.58□□□□□ -0.56
SCAP-202ENST00000320017 IL17RELQ6ZVW7 336 aa11.57□□□□□ -0.56
SCAP-202ENST00000320017 TMEM126AQ9H061 195 aa11.57□□□□□ -0.56
SCAP-202ENST00000320017 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
SCAP-202ENST00000320017 OOSP1A8MZH6 123 aa11.57□□□□□ -0.56
SCAP-202ENST00000320017 MRPS12O15235 138 aaKnown RBP11.57□□□□□ -0.56
SCAP-202ENST00000320017 ADIPOQQ15848 244 aa11.57□□□□□ -0.56
SCAP-202ENST00000320017 H3BRN7 92 aa11.57□□□□□ -0.56
SCAP-202ENST00000320017 C2orf82Q6UX34 121 aa11.57□□□□□ -0.56
SCAP-202ENST00000320017 C17orf100A8MU93 164 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 IGLV2-23P01705 113 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 PMVKQ15126 192 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 TIMD4Q96H15 378 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 DUX3Q96PT4 197 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 A4D1N5 150 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 INS-IGF2F8WCM5 200 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 MGPP08493 103 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 LYPD1Q8N2G4 141 aa11.56□□□□□ -0.56
SCAP-202ENST00000320017 USP9YO00507 2555 aaPredicted RBP11.55□□□□□ -0.56
SCAP-202ENST00000320017 IGLV3-9A0A075B6K5 115 aa11.55□□□□□ -0.56
SCAP-202ENST00000320017 LINC01620Q4KN68 170 aa11.55□□□□□ -0.56
SCAP-202ENST00000320017 LINC01619G3V211 115 aa11.55□□□□□ -0.56
SCAP-202ENST00000320017 SBSPONQ8IVN8 264 aa11.55□□□□□ -0.56
SCAP-202ENST00000320017 CREBBPQ92793 2442 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 IGHV3OR16-13A0A075B7E8 117 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 IGHV3-74A0A0B4J1X5 117 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 C2orf66Q6UXQ4 117 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 BSNQ9UPA5 3926 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 IGLV2-18A0A075B6J9 118 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 A0A0J9YY99 117 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 Q6Q795 121 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 EDA2RQ9HAV5 297 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 M0R381 172 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 ATXN8Q156A1 80 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 ZNF491Q8N8L2 437 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 CFHR4Q92496 578 aa11.54□□□□□ -0.56
SCAP-202ENST00000320017 NRGNQ92686 78 aa11.53□□□□□ -0.56
SCAP-202ENST00000320017 SMIM2Q9BVW6 85 aa11.53□□□□□ -0.56
SCAP-202ENST00000320017 CELSR1Q9NYQ6 3014 aa11.53□□□□□ -0.56
SCAP-202ENST00000320017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.53□□□□□ -0.56
SCAP-202ENST00000320017 TRGV11A0A075B6L2 103 aa11.53□□□□□ -0.56
SCAP-202ENST00000320017 TIMM23O14925 209 aa11.53□□□□□ -0.56
SCAP-202ENST00000320017 LGALS3P17931 250 aaKnown RBP11.53□□□□□ -0.56
SCAP-202ENST00000320017 BAALCQ8WXS3 180 aa11.53□□□□□ -0.56
SCAP-202ENST00000320017 LINC01587Q99440 93 aa11.53□□□□□ -0.56
SCAP-202ENST00000320017 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.57
SCAP-202ENST00000320017 SPANXA1Q9NS26 97 aa11.52□□□□□ -0.57
SCAP-202ENST00000320017 CUBNO60494 3623 aa11.52□□□□□ -0.57
SCAP-202ENST00000320017 NPFFO15130 113 aa11.52□□□□□ -0.57
SCAP-202ENST00000320017 ELANEP08246 267 aa11.52□□□□□ -0.57
SCAP-202ENST00000320017 DLX6P56179 175 aa11.52□□□□□ -0.57
SCAP-202ENST00000320017 MDFICQ9P1T7 246 aa11.52□□□□□ -0.57
SCAP-202ENST00000320017 TRAV12-1A0A0B4J245 112 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 C11orf86A6NJI1 115 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 ORMDL2Q53FV1 153 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 NRACQ8N912 160 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 DUSP14O95147 198 aaKnown RBP11.51□□□□□ -0.57
SCAP-202ENST00000320017 PRSS2P07478 247 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 LOXP28300 417 aaPredicted RBP11.51□□□□□ -0.57
SCAP-202ENST00000320017 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 RPL39LQ96EH5 51 aaKnown RBP11.51□□□□□ -0.57
SCAP-202ENST00000320017 DNAJC30Q96LL9 226 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 CSPG4Q6UVK1 2322 aa11.51□□□□□ -0.57
SCAP-202ENST00000320017 ZNF462Q96JM2 2506 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 IGHV3-66A0A0C4DH42 116 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 TMEM101Q96IK0 257 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 IGHV3-30P01768 117 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 CD3EP07766 207 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 IGHV3-30-5P0DP03 117 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 HERVK_113P63121 156 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 FAM19A5Q7Z5A7 132 aaPredicted RBP11.5□□□□□ -0.57
SCAP-202ENST00000320017 RNF182Q8N6D2 247 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 SIGLEC9Q9Y336 463 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 IGHV1-8P0DP01 117 aa11.5□□□□□ -0.57
SCAP-202ENST00000320017 GATA4P43694 442 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms