RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZFAND2AQ8N6M9 145 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 Q9UFV3 132 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 TRAV2A0A0B4J234 112 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 LEPROTO15243 131 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 MED13Q9UHV7 2174 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 ECSCRQ19T08 205 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 SFTA2Q6UW10 78 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 EDA2RQ9HAV5 297 aa3.64□□□□□ -1.83
PTPN13-201ENST00000316707 FAM223BA6NKX1 122 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 F5H697 171 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 FAM159AQ6UWV7 190 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 FAM223AQ8IWN6 122 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 RNF182Q8N6D2 247 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 C15orf53Q8NAA6 179 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 HEATR1Q9H583 2144 aaKnown RBP3.63□□□□□ -1.83
PTPN13-201ENST00000316707 PCSK5Q92824 1860 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 H3BMM0 161 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 ID1P41134 155 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 APRG1Q8IVJ8 170 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 UBE2WQ96B02 151 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 AJUBAQ96IF1 538 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 IGHV3-35A0A0C4DH35 117 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 ITLN2Q8WWU7 325 aaPredicted RBP3.63□□□□□ -1.83
PTPN13-201ENST00000316707 TMEM126AQ9H061 195 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 PRO3102Q9H379 93 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 C2orf82Q6UX34 121 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 WFDC12Q8WWY7 111 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 NDUFA4O00483 81 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 ATP5G1P05496 136 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 CLEC19AQ6UXS0 136 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 SS18L2Q9UHA2 77 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 A0A0J9YXY3 114 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 FAM90A27PA6NNH2 459 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 H3BUA1 57 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 RPL11P62913 178 aaKnown RBP3.63□□□□□ -1.83
PTPN13-201ENST00000316707 NSUN5P1Q3KNT7 163 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 C1orf43Q9BWL3 253 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 MSRB2Q9Y3D2 182 aa3.63□□□□□ -1.83
PTPN13-201ENST00000316707 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 BRI3O95415 125 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 UBE2E1P51965 193 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 ANXA2RQ3ZCQ2 193 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 C20orf203Q8NBC4 194 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 DPH3Q96FX2 82 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 HCFC1P51610 2035 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 LGALS9O00182 355 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 TTC28Q96AY4 2481 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 IGHV3OR16-8A0A075B7F1 116 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 CLPSL1A2RUU4 121 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 Q8N9W7 124 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 NHLRC4P0CG21 123 aaPredicted RBP3.62□□□□□ -1.83
PTPN13-201ENST00000316707 TRPT1Q86TN4 253 aaKnown RBP3.62□□□□□ -1.83
PTPN13-201ENST00000316707 TMEM263Q8WUH6 116 aaKnown RBP3.62□□□□□ -1.83
PTPN13-201ENST00000316707 RPL39LQ96EH5 51 aaKnown RBP3.62□□□□□ -1.83
PTPN13-201ENST00000316707 USMG5Q96IX5 58 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 KIF25-AS1Q9Y6Z4 181 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 PRSS2P07478 247 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 CCDC140Q96MF4 163 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 IGHV3OR16-13A0A075B7E8 117 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 IGHV3-74A0A0B4J1X5 117 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 CDK2AP2O75956 126 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 MOB4Q9Y3A3 225 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 PYGO1Q9Y3Y4 419 aa3.62□□□□□ -1.83
PTPN13-201ENST00000316707 TRAV4A0A0B4J268 109 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 ATP6V0E1O15342 81 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 CRYGDP07320 174 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 FHL3Q13643 280 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 MDFICQ9P1T7 246 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 TMEM95Q3KNT9 176 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 TRAV41A0A0B4J266 112 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 PRB4P10163 310 aaPredicted RBP3.61□□□□□ -1.83
PTPN13-201ENST00000316707 MUSTN1Q8IVN3 82 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 DEFB124Q8NES8 71 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 PIMREGQ9BSJ6 248 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 TET2Q6N021 2002 aaPredicted RBP3.61□□□□□ -1.83
PTPN13-201ENST00000316707 LYNX1G3V0Z9 82 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 TIMM17BO60830 172 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 LYNX1P0DP58 116 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 RNASE4P34096 147 aaKnown RBP3.61□□□□□ -1.83
PTPN13-201ENST00000316707 LINC00315P59091 139 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 SMIM20Q8N5G0 67 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 ODF3Q96PU9 254 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 WDFY3Q8IZQ1 3526 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 TRBV7-7A0A0K0K1E9 115 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 TMEM223A0PJW6 202 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 ZNF22P17026 224 aaPredicted RBP3.61□□□□□ -1.83
PTPN13-201ENST00000316707 GATA3P23771 443 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 CRIP2P52943 208 aaPredicted RBP3.61□□□□□ -1.83
PTPN13-201ENST00000316707 CIRBPQ14011 172 aaKnown RBP3.61□□□□□ -1.83
PTPN13-201ENST00000316707 TSHBP01222 138 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 DEFB121Q5J5C9 76 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 AMELXQ99217 191 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 CACNA1BQ00975 2339 aa3.61□□□□□ -1.83
PTPN13-201ENST00000316707 INAFM2P0DMQ5 153 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 GPHB5Q86YW7 130 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms