RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 RBMY1DP0C7P1 496 aaKnown RBP5.72□□□□□ -1.49
CNOT4-201ENST00000315544 TAL2Q16559 108 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 WFDC8Q8IUA0 241 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 BAALCQ8WXS3 180 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 PKHD1L1Q86WI1 4243 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 A0A0J9YX75 114 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 PRB4P10163 310 aaPredicted RBP5.72□□□□□ -1.49
CNOT4-201ENST00000315544 MGST1P10620 155 aaKnown RBP5.72□□□□□ -1.49
CNOT4-201ENST00000315544 TMEM97Q5BJF2 176 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 ZNF705AQ6ZN79 300 aaPredicted RBP5.72□□□□□ -1.49
CNOT4-201ENST00000315544 KLHDC1Q8N7A1 406 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 LINC01356Q8N9X3 169 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 C11orf72Q8NBR9 251 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 PLAC8L1A1L4L8 177 aa5.71□□□□□ -1.49
CNOT4-201ENST00000315544 G3V318 75 aa5.71□□□□□ -1.49
CNOT4-201ENST00000315544 APELAP0DMC3 54 aa5.71□□□□□ -1.49
CNOT4-201ENST00000315544 SAA4P35542 130 aa5.71□□□□□ -1.49
CNOT4-201ENST00000315544 FAM223BA6NKX1 122 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 K7EMT4 169 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 ZNF876PQ49A33 203 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 DEFB121Q5J5C9 76 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 SLC25A34Q6PIV7 304 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 FAM223AQ8IWN6 122 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 CARD19Q96LW7 228 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 C20orf78Q9BR46 151 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 CAMPP49913 170 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 MFAP4P55083 255 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 CFAP126Q5VTH2 177 aa5.71□□□□□ -1.5
CNOT4-201ENST00000315544 NUDT3O95989 172 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 LGALS1P09382 135 aaKnown RBP5.7□□□□□ -1.5
CNOT4-201ENST00000315544 C15orf32Q32M92 178 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 PIK3CD-AS1Q5SR53 167 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 AMMECR1LQ6DCA0 310 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 CEND1Q8N111 149 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 ZNF738Q8NE65 137 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 MRAP2Q96G30 205 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 PRELID3AQ96N28 172 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 ENY2Q9NPA8 101 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 GIG44P09565 113 aaPredicted RBP5.7□□□□□ -1.5
CNOT4-201ENST00000315544 SMIM17P0DL12 118 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 HILS1P60008 231 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 ARF6P62330 175 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 NSUN5P1Q3KNT7 163 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 RNASEKQ6P5S7 137 aaKnown RBP5.7□□□□□ -1.5
CNOT4-201ENST00000315544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.7□□□□□ -1.5
CNOT4-201ENST00000315544 OR2K2Q8NGT1 345 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 IFI27L1Q96BM0 104 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 HSPB8Q9UJY1 196 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 NDUFA4O00483 81 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 IGHV3-30P01768 117 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 IGHV3-30-5P0DP03 117 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 LYZP61626 148 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 HSD52Q0P140 79 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 FER1L6-AS1Q8NA97 138 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 PIMREGQ9BSJ6 248 aa5.7□□□□□ -1.5
CNOT4-201ENST00000315544 GAGE12BA1L429 117 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 RNASE1P07998 156 aaKnown RBP5.69□□□□□ -1.5
CNOT4-201ENST00000315544 TCTEX1D4Q5JR98 221 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 RNF183Q96D59 192 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 Q9UF83 564 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 ICE1Q9Y2F5 2266 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 HNRNPA3P51991 378 aaKnown RBP5.69□□□□□ -1.5
CNOT4-201ENST00000315544 IGHV3-16A0A0C4DH30 117 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 M0QY20 66 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 ELANEP08246 267 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 FXYD7P58549 80 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 Q6YL49 198 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 SLC50A1Q9BRV3 221 aa5.69□□□□□ -1.5
CNOT4-201ENST00000315544 RIGQ13278 110 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 UBTD1Q9HAC8 227 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 ESM1Q9NQ30 184 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 SH3BGRL2Q9UJC5 107 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 S4R3C0 116 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 COL7A1Q02388 2944 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 SACSQ9NZJ4 4579 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 STARD9Q9P2P6 4700 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 TRAV26-2A0A0B4J265 109 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 IGLL5B9A064 214 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 NPFFO15130 113 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 ZNF705DP0CH99 300 aaPredicted RBP5.68□□□□□ -1.5
CNOT4-201ENST00000315544 ZNF705BP0CI00 300 aaPredicted RBP5.68□□□□□ -1.5
CNOT4-201ENST00000315544 RPL7P18124 248 aaKnown RBP5.68□□□□□ -1.5
CNOT4-201ENST00000315544 CACNG7P62955 275 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 OR4X2Q8NGF9 303 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 PLEKHB2Q96CS7 222 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 SAMD10Q9BYL1 202 aa5.68□□□□□ -1.5
CNOT4-201ENST00000315544 A0A0J9YY99 117 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 FABP5P3A8MUU1 101 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 HSBP1O75506 76 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 MAP1LC3CQ9BXW4 147 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 BPESC1Q9GZL8 116 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 RYR2Q92736 4967 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 MSMBP08118 114 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 DEFB1P60022 68 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 PSMG4Q5JS54 123 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 C12orf54Q6X4T0 127 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 NXT2Q9NPJ8 142 aaKnown RBP5.67□□□□□ -1.5
CNOT4-201ENST00000315544 CLEC3BP05452 202 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 MRPL35Q9NZE8 188 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms