RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PAX2Q02962 417 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 MYCNOSP40205 109 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 C9orf47Q6ZRZ4 202 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 POLR3KQ9Y2Y1 108 aaPredicted RBP10.47□□□□□ -0.73
DDX54-202ENST00000314045 A0A087X0K7 114 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 RPL13AP40429 203 aaKnown RBP10.47□□□□□ -0.73
DDX54-202ENST00000314045 Q6ZSV7 163 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 SPXQ9BT56 116 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 INAFM1C9JVW0 142 aa10.46□□□□□ -0.73
DDX54-202ENST00000314045 APOC4P55056 127 aa10.46□□□□□ -0.73
DDX54-202ENST00000314045 NDUFAF3Q9BU61 184 aa10.46□□□□□ -0.73
DDX54-202ENST00000314045 GAGE12JA6NER3 117 aa10.46□□□□□ -0.74
DDX54-202ENST00000314045 GAGE1Q13065 139 aa10.46□□□□□ -0.74
DDX54-202ENST00000314045 GAGE4Q13068 117 aa10.46□□□□□ -0.74
DDX54-202ENST00000314045 GAGE5Q13069 117 aa10.46□□□□□ -0.74
DDX54-202ENST00000314045 GAGE13Q4V321 117 aa10.46□□□□□ -0.74
DDX54-202ENST00000314045 Q8N8P6 123 aa10.46□□□□□ -0.74
DDX54-202ENST00000314045 VWC2LB2RUY7 222 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 RPL24P83731 157 aaKnown RBP10.45□□□□□ -0.74
DDX54-202ENST00000314045 C9orf66Q5T8R8 295 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 OR5A1Q8NGJ0 315 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 WIPF2Q8TF74 440 aaPredicted RBP10.45□□□□□ -0.74
DDX54-202ENST00000314045 SIGLEC8Q9NYZ4 499 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 Q6ZS46 218 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 MRPL16Q9NX20 251 aaKnown RBP10.45□□□□□ -0.74
DDX54-202ENST00000314045 MSRB1Q9NZV6 116 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 hDV102S1A0JD36 115 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 COX6CP09669 75 aa10.45□□□□□ -0.74
DDX54-202ENST00000314045 RAI1Q7Z5J4 1906 aaPredicted RBP10.45□□□□□ -0.74
DDX54-202ENST00000314045 TEX43Q6ZNM6 134 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 VPS25Q9BRG1 176 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 HECTD1Q9ULT8 2610 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 DAD1P61803 113 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 FABP2P12104 132 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 SMIM2Q9BVW6 85 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 IGHV3-64A0A075B6Q5 118 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 NEGR1Q7Z3B1 354 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 GTSF1Q8WW33 167 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 COPS9Q8WXC6 57 aa10.44□□□□□ -0.74
DDX54-202ENST00000314045 TRAV25A0A0B4J276 109 aa10.43□□□□□ -0.74
DDX54-202ENST00000314045 M0R2P5 195 aa10.43□□□□□ -0.74
DDX54-202ENST00000314045 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
DDX54-202ENST00000314045 GAGE10A6NGK3 116 aa10.43□□□□□ -0.74
DDX54-202ENST00000314045 F5H768 121 aa10.43□□□□□ -0.74
DDX54-202ENST00000314045 TP53TG1Q9Y2A0 90 aa10.43□□□□□ -0.74
DDX54-202ENST00000314045 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
DDX54-202ENST00000314045 U3KQE9 123 aa10.42□□□□□ -0.74
DDX54-202ENST00000314045 TRBV6-1A0A0K0K1D8 114 aa10.42□□□□□ -0.74
DDX54-202ENST00000314045 LY6G6DO95868 133 aa10.42□□□□□ -0.74
DDX54-202ENST00000314045 CENPEQ02224 2701 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 WDFY4Q6ZS81 3184 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 A0A0J9YX75 114 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 I3L3M4 83 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 SMIM13P0DJ93 91 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 TRAV13-1A0A0B4J241 112 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 APOMO95445 188 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 GATA1P15976 413 aaPredicted RBP10.41□□□□□ -0.74
DDX54-202ENST00000314045 MALP21145 153 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 PLNP26678 52 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
DDX54-202ENST00000314045 PSMG3-AS1Q96PY0 264 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 XIRP2A4UGR9 3374 aa10.41□□□□□ -0.74
DDX54-202ENST00000314045 IGHV1-24A0A0C4DH33 117 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 IGHV3-38A0A0C4DH36 116 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 Q6ZWC4 215 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 ZNF702PQ9H963 129 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 C19orf71A6NCJ1 209 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 IGLV2-8P01709 118 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 CRPP02741 224 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 PSMB8P28062 276 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 MBD6Q96DN6 1003 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 FRMD6-AS1P0C7T7 363 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 OR13C6PQ8NH95 151 aa10.4□□□□□ -0.74
DDX54-202ENST00000314045 EREGO14944 169 aa10.4□□□□□ -0.75
DDX54-202ENST00000314045 SEC11AP67812 179 aa10.4□□□□□ -0.75
DDX54-202ENST00000314045 C20orf78Q9BR46 151 aa10.4□□□□□ -0.75
DDX54-202ENST00000314045 MGAQ8IWI9 3026 aa10.39□□□□□ -0.75
DDX54-202ENST00000314045 A0A0U1RRA0 63 aa10.39□□□□□ -0.75
DDX54-202ENST00000314045 SRSF2Q01130 221 aaKnown RBP10.39□□□□□ -0.75
DDX54-202ENST00000314045 LINC00322Q6ZN03 302 aaPredicted RBP10.39□□□□□ -0.75
DDX54-202ENST00000314045 Q8N1Y9 231 aa10.39□□□□□ -0.75
DDX54-202ENST00000314045 ZNF664Q8N3J9 261 aa10.39□□□□□ -0.75
DDX54-202ENST00000314045 LGALS9O00182 355 aa10.39□□□□□ -0.75
DDX54-202ENST00000314045 STPG4Q8N801 248 aa10.38□□□□□ -0.75
DDX54-202ENST00000314045 MLST8Q9BVC4 326 aa10.38□□□□□ -0.75
DDX54-202ENST00000314045 K7EQG2 157 aa10.38□□□□□ -0.75
DDX54-202ENST00000314045 ZNF80P51504 273 aaPredicted RBP10.38□□□□□ -0.75
DDX54-202ENST00000314045 RNF152Q8N8N0 203 aa10.38□□□□□ -0.75
DDX54-202ENST00000314045 COA6Q5JTJ3 125 aaKnown RBP10.38□□□□□ -0.75
DDX54-202ENST00000314045 ZNF493Q6ZR52 646 aa10.38□□□□□ -0.75
DDX54-202ENST00000314045 LINC01006Q8NI28 216 aa10.37□□□□□ -0.75
DDX54-202ENST00000314045 HIST2H2BDQ6DRA6 164 aa10.37□□□□□ -0.75
DDX54-202ENST00000314045 MORN3Q6PF18 240 aaPredicted RBP10.37□□□□□ -0.75
DDX54-202ENST00000314045 ADAMTSL5Q6ZMM2 481 aa10.37□□□□□ -0.75
DDX54-202ENST00000314045 NHP2Q9NX24 153 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms