RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 USP9XQ93008 2570 aaPredicted RBP19.08■□□□□ 0.65
HOXB3-201ENST00000311626 AGRNO00468 2067 aa19.08■□□□□ 0.64
HOXB3-201ENST00000311626 K7EP34 96 aa19.08■□□□□ 0.64
HOXB3-201ENST00000311626 SMIM13P0DJ93 91 aa19.08■□□□□ 0.64
HOXB3-201ENST00000311626 CLEC2AQ6UVW9 174 aa19.08■□□□□ 0.64
HOXB3-201ENST00000311626 SMPXQ9UHP9 88 aa19.08■□□□□ 0.64
HOXB3-201ENST00000311626 A0A1W2PPM0 123 aa19.07■□□□□ 0.64
HOXB3-201ENST00000311626 GTF2H5Q6ZYL4 71 aa19.07■□□□□ 0.64
HOXB3-201ENST00000311626 USMG5Q96IX5 58 aa19.07■□□□□ 0.64
HOXB3-201ENST00000311626 DPH3P1Q9H4G8 78 aa19.07■□□□□ 0.64
HOXB3-201ENST00000311626 SORL1Q92673 2214 aa19.07■□□□□ 0.64
HOXB3-201ENST00000311626 SPCS1Q9Y6A9 102 aa19.07■□□□□ 0.64
HOXB3-201ENST00000311626 RNF223E7ERA6 249 aa19.06■□□□□ 0.64
HOXB3-201ENST00000311626 IGKV3-20P01619 116 aa19.06■□□□□ 0.64
HOXB3-201ENST00000311626 ZANQ9Y493 2812 aa19.06■□□□□ 0.64
HOXB3-201ENST00000311626 SAMD5Q5TGI4 173 aa19.05■□□□□ 0.64
HOXB3-201ENST00000311626 ATP6V0BQ99437 205 aa19.05■□□□□ 0.64
HOXB3-201ENST00000311626 FAM19A4Q96LR4 140 aa19.04■□□□□ 0.64
HOXB3-201ENST00000311626 MSMBP08118 114 aa19.04■□□□□ 0.64
HOXB3-201ENST00000311626 POLQO75417 2590 aa19.04■□□□□ 0.64
HOXB3-201ENST00000311626 HIGD1BQ9P298 99 aa19.04■□□□□ 0.64
HOXB3-201ENST00000311626 USP9YO00507 2555 aaPredicted RBP19.03■□□□□ 0.64
HOXB3-201ENST00000311626 MAPK1IP1LQ8NDC0 245 aa19.03■□□□□ 0.64
HOXB3-201ENST00000311626 CSTL1Q9H114 145 aa19.03■□□□□ 0.64
HOXB3-201ENST00000311626 DAZ1Q9NQZ3 744 aaKnown RBP19.03■□□□□ 0.64
HOXB3-201ENST00000311626 CHTOPQ9Y3Y2 248 aaKnown RBP19.03■□□□□ 0.64
HOXB3-201ENST00000311626 A0A087WWL8 130 aa19.03■□□□□ 0.64
HOXB3-201ENST00000311626 CEND1Q8N111 149 aa19.03■□□□□ 0.64
HOXB3-201ENST00000311626 TRAV12-3A0A0B4J271 114 aa19.02■□□□□ 0.64
HOXB3-201ENST00000311626 C2orf66Q6UXQ4 117 aa19.02■□□□□ 0.64
HOXB3-201ENST00000311626 H7C1H1 209 aa19.02■□□□□ 0.63
HOXB3-201ENST00000311626 IGLV1-40P01703 118 aa19.02■□□□□ 0.63
HOXB3-201ENST00000311626 TOMM6Q96B49 74 aa19.02■□□□□ 0.63
HOXB3-201ENST00000311626 CENPEQ02224 2701 aa19.01■□□□□ 0.63
HOXB3-201ENST00000311626 F8VRH5 84 aa19.01■□□□□ 0.63
HOXB3-201ENST00000311626 EMP1P54849 157 aa19.01■□□□□ 0.63
HOXB3-201ENST00000311626 IGHV4-59P01825 116 aa19■□□□□ 0.63
HOXB3-201ENST00000311626 ORMDL2Q53FV1 153 aa19■□□□□ 0.63
HOXB3-201ENST00000311626 PIEZO1Q92508 2521 aa19■□□□□ 0.63
HOXB3-201ENST00000311626 FABP2P12104 132 aa19■□□□□ 0.63
HOXB3-201ENST00000311626 TRAV12-2A0A075B6T6 113 aa18.99■□□□□ 0.63
HOXB3-201ENST00000311626 ZNF688P0C7X2 276 aa18.99■□□□□ 0.63
HOXB3-201ENST00000311626 PLNP26678 52 aa18.99■□□□□ 0.63
HOXB3-201ENST00000311626 NEXN-AS1Q8NBZ9 246 aa18.99■□□□□ 0.63
HOXB3-201ENST00000311626 PHLDA1Q8WV24 401 aaPredicted RBP18.99■□□□□ 0.63
HOXB3-201ENST00000311626 BAALCQ8WXS3 180 aa18.99■□□□□ 0.63
HOXB3-201ENST00000311626 DUSP14O95147 198 aaKnown RBP18.98■□□□□ 0.63
HOXB3-201ENST00000311626 HIST1H4GQ99525 98 aa18.98■□□□□ 0.63
HOXB3-201ENST00000311626 C20orf78Q9BR46 151 aa18.98■□□□□ 0.63
HOXB3-201ENST00000311626 IGSF10Q6WRI0 2623 aa18.97■□□□□ 0.63
HOXB3-201ENST00000311626 PRSS29PA6NIE9 313 aa18.97■□□□□ 0.63
HOXB3-201ENST00000311626 H3BUA1 57 aa18.97■□□□□ 0.63
HOXB3-201ENST00000311626 CD7P09564 240 aa18.97■□□□□ 0.63
HOXB3-201ENST00000311626 FAM159AQ6UWV7 190 aa18.97■□□□□ 0.63
HOXB3-201ENST00000311626 DUX5Q96PT3 197 aa18.97■□□□□ 0.63
HOXB3-201ENST00000311626 F5H697 171 aa18.96■□□□□ 0.63
HOXB3-201ENST00000311626 HLA-DRB4P13762 266 aa18.96■□□□□ 0.63
HOXB3-201ENST00000311626 RIPPLY3P57055 190 aa18.96■□□□□ 0.63
HOXB3-201ENST00000311626 HLA-DRB4X5D2U9 266 aa18.96■□□□□ 0.63
HOXB3-201ENST00000311626 MYO18BQ8IUG5 2567 aa18.96■□□□□ 0.63
HOXB3-201ENST00000311626 PSMG4Q5JS54 123 aa18.96■□□□□ 0.63
HOXB3-201ENST00000311626 DCANP1Q8TF63 244 aa18.96■□□□□ 0.63
HOXB3-201ENST00000311626 K7ERU9 68 aa18.95■□□□□ 0.62
HOXB3-201ENST00000311626 LINC00315P59091 139 aa18.95■□□□□ 0.62
HOXB3-201ENST00000311626 CFHR3Q02985 330 aa18.95■□□□□ 0.62
HOXB3-201ENST00000311626 DEFB112Q30KQ8 113 aa18.95■□□□□ 0.62
HOXB3-201ENST00000311626 FAM74A4Q5TZK3 123 aa18.95■□□□□ 0.62
HOXB3-201ENST00000311626 TM2D2Q9BX73 214 aa18.95■□□□□ 0.62
HOXB3-201ENST00000311626 DOPEY1Q5JWR5 2465 aa18.95■□□□□ 0.62
HOXB3-201ENST00000311626 TRAV12-1A0A0B4J245 112 aa18.95■□□□□ 0.62
HOXB3-201ENST00000311626 RPL39P62891 51 aaKnown RBP18.94■□□□□ 0.62
HOXB3-201ENST00000311626 APRG1Q8IVJ8 170 aa18.94■□□□□ 0.62
HOXB3-201ENST00000311626 KIF25-AS1Q9Y6Z4 181 aa18.94■□□□□ 0.62
HOXB3-201ENST00000311626 KLLNB2CW77 178 aa18.93■□□□□ 0.62
HOXB3-201ENST00000311626 OR11H12B2RN74 326 aa18.93■□□□□ 0.62
HOXB3-201ENST00000311626 OR11H1Q8NG94 326 aa18.93■□□□□ 0.62
HOXB3-201ENST00000311626 OR11H2Q8NH07 326 aa18.93■□□□□ 0.62
HOXB3-201ENST00000311626 CYSLTR1Q9Y271 337 aa18.93■□□□□ 0.62
HOXB3-201ENST00000311626 CREBBPQ92793 2442 aa18.93■□□□□ 0.62
HOXB3-201ENST00000311626 NDUFS8O00217 210 aa18.93■□□□□ 0.62
HOXB3-201ENST00000311626 SUMO4Q6EEV6 95 aa18.93■□□□□ 0.62
HOXB3-201ENST00000311626 MDFICQ9P1T7 246 aa18.92■□□□□ 0.62
HOXB3-201ENST00000311626 MYMXA0A1B0GTQ4 84 aa18.91■□□□□ 0.62
HOXB3-201ENST00000311626 C12orf74Q32Q52 190 aa18.91■□□□□ 0.62
HOXB3-201ENST00000311626 CD300EQ496F6 205 aaPredicted RBP18.91■□□□□ 0.62
HOXB3-201ENST00000311626 KLHL30-AS1Q8NEE0 82 aa18.91■□□□□ 0.62
HOXB3-201ENST00000311626 PRADC1Q9BSG0 188 aa18.91■□□□□ 0.62
HOXB3-201ENST00000311626 TP53TG1Q9Y2A0 90 aa18.91■□□□□ 0.62
HOXB3-201ENST00000311626 CACNA1AO00555 2505 aa18.9■□□□□ 0.62
HOXB3-201ENST00000311626 TSHBP01222 138 aa18.9■□□□□ 0.62
HOXB3-201ENST00000311626 ID1P41134 155 aa18.9■□□□□ 0.62
HOXB3-201ENST00000311626 B4DSR2 109 aa18.9■□□□□ 0.62
HOXB3-201ENST00000311626 BRI3O95415 125 aa18.9■□□□□ 0.62
HOXB3-201ENST00000311626 IGLL5B9A064 214 aa18.89■□□□□ 0.62
HOXB3-201ENST00000311626 CRYGDP07320 174 aa18.89■□□□□ 0.62
HOXB3-201ENST00000311626 MED14OSP0DP75 135 aa18.89■□□□□ 0.62
HOXB3-201ENST00000311626 PSMB8P28062 276 aa18.89■□□□□ 0.62
HOXB3-201ENST00000311626 MTURNQ8N3F0 131 aa18.89■□□□□ 0.62
HOXB3-201ENST00000311626 SLC25A16P16260 332 aa18.89■□□□□ 0.61
HOXB3-201ENST00000311626 OR5A1Q8NGJ0 315 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms