RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 HHLA3Q9XRX5 114 aa16.1■□□□□ 0.17
SH3RF3-201ENST00000309415 ZNF664Q8N3J9 261 aa16.1■□□□□ 0.17
SH3RF3-201ENST00000309415 INSL3P51460 131 aa16.1■□□□□ 0.17
SH3RF3-201ENST00000309415 DNAJC9-AS1A6NH13 148 aa16.1■□□□□ 0.17
SH3RF3-201ENST00000309415 DEFB4AO15263 64 aa16.09■□□□□ 0.17
SH3RF3-201ENST00000309415 SEM1Q6ZVN7 128 aa16.09■□□□□ 0.17
SH3RF3-201ENST00000309415 NLRC5Q86WI3 1866 aa16.09■□□□□ 0.17
SH3RF3-201ENST00000309415 HELZP42694 1942 aaKnown RBP16.09■□□□□ 0.17
SH3RF3-201ENST00000309415 UBE2V1Q13404 147 aa16.09■□□□□ 0.17
SH3RF3-201ENST00000309415 FGF23Q9GZV9 251 aaPredicted RBP16.09■□□□□ 0.17
SH3RF3-201ENST00000309415 PLXND1Q9Y4D7 1925 aa16.09■□□□□ 0.17
SH3RF3-201ENST00000309415 TRAV12-1A0A0B4J245 112 aa16.08■□□□□ 0.17
SH3RF3-201ENST00000309415 IGLL5B9A064 214 aa16.08■□□□□ 0.17
SH3RF3-201ENST00000309415 K7EMT4 169 aa16.08■□□□□ 0.17
SH3RF3-201ENST00000309415 KRTAP27-1Q3LI81 207 aa16.08■□□□□ 0.17
SH3RF3-201ENST00000309415 POLR3KQ9Y2Y1 108 aaPredicted RBP16.08■□□□□ 0.17
SH3RF3-201ENST00000309415 A0A1W2PNU3 283 aaPredicted RBP16.08■□□□□ 0.16
SH3RF3-201ENST00000309415 TINCRA0A1B0GVN0 87 aa16.08■□□□□ 0.16
SH3RF3-201ENST00000309415 NUP210Q8TEM1 1887 aaPredicted RBP16.08■□□□□ 0.16
SH3RF3-201ENST00000309415 CARD19Q96LW7 228 aa16.08■□□□□ 0.16
SH3RF3-201ENST00000309415 UBE2AP49459 152 aa16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 CEND1Q8N111 149 aa16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 ABCA1O95477 2261 aa16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 LRRC75A-AS1Q8N1F1 130 aa16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 RNF138Q8WVD3 245 aa16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 TIMM17AQ99595 171 aa16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 DLEU1O43261 78 aa16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 LOXL1Q08397 574 aaPredicted RBP16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 BVES-AS1Q5T3Y7 98 aa16.07■□□□□ 0.16
SH3RF3-201ENST00000309415 COX8AP10176 69 aa16.06■□□□□ 0.16
SH3RF3-201ENST00000309415 Q8N7P7 452 aa16.06■□□□□ 0.16
SH3RF3-201ENST00000309415 WIPF3A6NGB9 483 aa16.06■□□□□ 0.16
SH3RF3-201ENST00000309415 FBXL19-AS1Q494R0 122 aa16.06■□□□□ 0.16
SH3RF3-201ENST00000309415 GPHB5Q86YW7 130 aa16.06■□□□□ 0.16
SH3RF3-201ENST00000309415 GTSF1LQ9H1H1 148 aa16.06■□□□□ 0.16
SH3RF3-201ENST00000309415 C4orf48Q5BLP8 95 aa16.05■□□□□ 0.16
SH3RF3-201ENST00000309415 WNK2Q9Y3S1 2297 aa16.05■□□□□ 0.16
SH3RF3-201ENST00000309415 IGHG2P01859 326 aa16.05■□□□□ 0.16
SH3RF3-201ENST00000309415 SIRPDQ9H106 197 aa16.05■□□□□ 0.16
SH3RF3-201ENST00000309415 DKK2Q9UBU2 259 aa16.05■□□□□ 0.16
SH3RF3-201ENST00000309415 K7EN84 100 aa16.05■□□□□ 0.16
SH3RF3-201ENST00000309415 RPL39LQ96EH5 51 aaKnown RBP16.04■□□□□ 0.16
SH3RF3-201ENST00000309415 Q8NA96 180 aa16.04■□□□□ 0.16
SH3RF3-201ENST00000309415 FANCD2OSQ96PS1 177 aa16.04■□□□□ 0.16
SH3RF3-201ENST00000309415 ORMDL1Q9P0S3 153 aa16.04■□□□□ 0.16
SH3RF3-201ENST00000309415 COX11Q9Y6N1 276 aa16.03■□□□□ 0.16
SH3RF3-201ENST00000309415 NDUFA1O15239 70 aa16.03■□□□□ 0.16
SH3RF3-201ENST00000309415 C9orf118A6NHY6 69 aa16.03■□□□□ 0.16
SH3RF3-201ENST00000309415 SPRY4Q9C004 299 aa16.03■□□□□ 0.16
SH3RF3-201ENST00000309415 IGKV1-17P01599 117 aa16.03■□□□□ 0.16
SH3RF3-201ENST00000309415 NBASA2RRP1 2371 aa16.03■□□□□ 0.16
SH3RF3-201ENST00000309415 HIST2H2BCQ6DN03 193 aa16.02■□□□□ 0.16
SH3RF3-201ENST00000309415 Q8N1Y9 231 aa16.02■□□□□ 0.16
SH3RF3-201ENST00000309415 C20orf144Q9BQM9 153 aa16.02■□□□□ 0.16
SH3RF3-201ENST00000309415 DOCK10Q96BY6 2186 aa16.02■□□□□ 0.15
SH3RF3-201ENST00000309415 NDUFA11Q86Y39 141 aa16.02■□□□□ 0.15
SH3RF3-201ENST00000309415 GATA1P15976 413 aaPredicted RBP16.01■□□□□ 0.15
SH3RF3-201ENST00000309415 FUSP35637 526 aaKnown RBP eCLIP16.01■□□□□ 0.15
SH3RF3-201ENST00000309415 A6NDX4 124 aa16.01■□□□□ 0.15
SH3RF3-201ENST00000309415 PPDPFLQ8WWR9 84 aa16.01■□□□□ 0.15
SH3RF3-201ENST00000309415 MYLKQ15746 1914 aa16.01■□□□□ 0.15
SH3RF3-201ENST00000309415 COX7B2Q8TF08 81 aa16■□□□□ 0.15
SH3RF3-201ENST00000309415 TRBV7-3A0A075B6L6 115 aa16■□□□□ 0.15
SH3RF3-201ENST00000309415 WI2-2373I1.2A0A1W2PRP0 233 aa16■□□□□ 0.15
SH3RF3-201ENST00000309415 PRSS47A8MTI9 375 aa15.99■□□□□ 0.15
SH3RF3-201ENST00000309415 IGLC2P0DOY2 106 aa15.99■□□□□ 0.15
SH3RF3-201ENST00000309415 IGLC3P0DOY3 106 aa15.99■□□□□ 0.15
SH3RF3-201ENST00000309415 C11orf45Q8TAV5 145 aa15.99■□□□□ 0.15
SH3RF3-201ENST00000309415 ANAPC1Q9H1A4 1944 aa15.99■□□□□ 0.15
SH3RF3-201ENST00000309415 C9orf153Q5TBE3 101 aa15.98■□□□□ 0.15
SH3RF3-201ENST00000309415 C15orf53Q8NAA6 179 aa15.98■□□□□ 0.15
SH3RF3-201ENST00000309415 IGLL1P15814 213 aa15.98■□□□□ 0.15
SH3RF3-201ENST00000309415 ZFP2Q6ZN57 461 aa15.98■□□□□ 0.15
SH3RF3-201ENST00000309415 SPTAN1Q13813 2472 aaKnown RBP15.98■□□□□ 0.15
SH3RF3-201ENST00000309415 TEX22C9J3V5 150 aa15.98■□□□□ 0.15
SH3RF3-201ENST00000309415 DEFB125Q8N687 156 aa15.98■□□□□ 0.15
SH3RF3-201ENST00000309415 IGLV1-47P01700 117 aa15.97■□□□□ 0.15
SH3RF3-201ENST00000309415 ZNF124Q15973 351 aa15.97■□□□□ 0.15
SH3RF3-201ENST00000309415 VSIG2Q96IQ7 327 aa15.97■□□□□ 0.15
SH3RF3-201ENST00000309415 TNFRSF13BO14836 293 aaPredicted RBP15.96■□□□□ 0.15
SH3RF3-201ENST00000309415 C9orf47Q6ZRZ4 202 aa15.96■□□□□ 0.15
SH3RF3-201ENST00000309415 KLK12Q9UKR0 248 aa15.96■□□□□ 0.15
SH3RF3-201ENST00000309415 C19orf84I3L1E1 186 aa15.96■□□□□ 0.15
SH3RF3-201ENST00000309415 INAFM1C9JVW0 142 aa15.96■□□□□ 0.14
SH3RF3-201ENST00000309415 F8W1H4 67 aa15.95■□□□□ 0.14
SH3RF3-201ENST00000309415 NDUFB1O75438 58 aa15.95■□□□□ 0.14
SH3RF3-201ENST00000309415 RNF183Q96D59 192 aa15.95■□□□□ 0.14
SH3RF3-201ENST00000309415 SND1-IT1Q9HBX3 110 aa15.95■□□□□ 0.14
SH3RF3-201ENST00000309415 K7ERJ3 54 aa15.95■□□□□ 0.14
SH3RF3-201ENST00000309415 IGHV4-31P0DP07 118 aa15.95■□□□□ 0.14
SH3RF3-201ENST00000309415 PRAC2D3DTV9 90 aa15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 NDUFS6O75380 124 aaKnown RBP15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 PATE2Q6UY27 113 aa15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 TMEM61Q8N0U2 210 aa15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 SIVA1O15304 175 aa15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 BAALC-AS2P0C853 105 aa15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 CFC1BP0CG36 223 aa15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 CFC1P0CG37 223 aa15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 TMEM263Q8WUH6 116 aaKnown RBP15.94■□□□□ 0.14
SH3RF3-201ENST00000309415 HEATR5AQ86XA9 2040 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms