RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FAM231CP0DMU5 169 aa9.91□□□□□ -0.82
USP38-201ENST00000307017 ELANEP08246 267 aa9.91□□□□□ -0.82
USP38-201ENST00000307017 LMO1P25800 156 aa9.91□□□□□ -0.82
USP38-201ENST00000307017 USF3Q68DE3 2245 aa9.91□□□□□ -0.82
USP38-201ENST00000307017 CFC1BP0CG36 223 aa9.9□□□□□ -0.82
USP38-201ENST00000307017 CFC1P0CG37 223 aa9.9□□□□□ -0.82
USP38-201ENST00000307017 LOXP28300 417 aaPredicted RBP9.9□□□□□ -0.82
USP38-201ENST00000307017 IGHV2-70DA0A0C4DH43 119 aa9.9□□□□□ -0.82
USP38-201ENST00000307017 IGHV4-38-2P0DP08 117 aa9.9□□□□□ -0.82
USP38-201ENST00000307017 ICOSQ9Y6W8 199 aa9.9□□□□□ -0.82
USP38-201ENST00000307017 ABCA1O95477 2261 aa9.9□□□□□ -0.82
USP38-201ENST00000307017 ZNF883P0CG24 379 aa9.9□□□□□ -0.82
USP38-201ENST00000307017 TMEM61Q8N0U2 210 aa9.9□□□□□ -0.83
USP38-201ENST00000307017 MRPL53Q96EL3 112 aaKnown RBP9.9□□□□□ -0.83
USP38-201ENST00000307017 PLCE1Q9P212 2302 aa9.9□□□□□ -0.83
USP38-201ENST00000307017 GYPEP15421 78 aa9.9□□□□□ -0.83
USP38-201ENST00000307017 UTF1Q5T230 341 aa9.9□□□□□ -0.83
USP38-201ENST00000307017 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.83
USP38-201ENST00000307017 LTBP1Q14766 1721 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 C15orf65H3BRN8 121 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 HIST2H2BCQ6DN03 193 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 NLRC5Q86WI3 1866 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 PRAC2D3DTV9 90 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 A4D1N5 150 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 DEFB112Q30KQ8 113 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 TRAV26-1A0A087WT03 109 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 ATP5G1P05496 136 aa9.89□□□□□ -0.83
USP38-201ENST00000307017 GTSF1Q8WW33 167 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 SIP14410 1827 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 IGLL5B9A064 214 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 IGLC1P0CG04 106 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 FANCD2OSQ96PS1 177 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 TRAV23DV6A0A075B6W5 121 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 TRBV6-6A0A0A6YYG2 114 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 IGHV7-4-1A0A0J9YVY3 117 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 A0A0J9YXV3 536 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 HERVK_113P63121 156 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 ZNF747Q9BV97 191 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 PLXNB3Q9ULL4 1909 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 UBE2AP49459 152 aa9.88□□□□□ -0.83
USP38-201ENST00000307017 GATA3P23771 443 aa9.87□□□□□ -0.83
USP38-201ENST00000307017 PDE6HQ13956 83 aa9.87□□□□□ -0.83
USP38-201ENST00000307017 C9orf47Q6ZRZ4 202 aa9.87□□□□□ -0.83
USP38-201ENST00000307017 AGPAT4-IT1Q9H0P7 198 aa9.87□□□□□ -0.83
USP38-201ENST00000307017 RSPO1Q2MKA7 263 aaPredicted RBP9.87□□□□□ -0.83
USP38-201ENST00000307017 PLXNA4Q9HCM2 1894 aa9.87□□□□□ -0.83
USP38-201ENST00000307017 ZNF503Q96F45 646 aa9.87□□□□□ -0.83
USP38-201ENST00000307017 BLCAPP62952 87 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 LINC01559Q495D7 138 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 ZNF491Q8N8L2 437 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 SLPIP03973 132 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 RNF114Q9Y508 228 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 IGKV4-1P06312 121 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 TIRAPP58753 221 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 FNDC10F2Z333 226 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 PKDREJQ9NTG1 2253 aa9.86□□□□□ -0.83
USP38-201ENST00000307017 PSMB8P28062 276 aa9.85□□□□□ -0.83
USP38-201ENST00000307017 SND1-IT1Q9HBX3 110 aa9.85□□□□□ -0.83
USP38-201ENST00000307017 TRIOBPQ9H2D6 2365 aa9.85□□□□□ -0.83
USP38-201ENST00000307017 C1orf147Q96MC9 270 aaPredicted RBP9.85□□□□□ -0.83
USP38-201ENST00000307017 CTSZQ9UBR2 303 aa9.85□□□□□ -0.83
USP38-201ENST00000307017 ETDCA0A1B0GVM5 59 aa9.85□□□□□ -0.83
USP38-201ENST00000307017 H0Y9J4 135 aa9.85□□□□□ -0.83
USP38-201ENST00000307017 DSCR9P59020 149 aa9.85□□□□□ -0.83
USP38-201ENST00000307017 CAMK2N2Q96S95 79 aa9.85□□□□□ -0.83
USP38-201ENST00000307017 F8W735 103 aaPredicted RBP9.84□□□□□ -0.83
USP38-201ENST00000307017 CCL24O00175 119 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 ROS1P08922 2347 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 YPEL3P61236 119 aaPredicted RBP9.84□□□□□ -0.83
USP38-201ENST00000307017 C10orf91Q5T1B1 145 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 WI2-2373I1.2A0A1W2PRP0 233 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 ANAPC1Q9H1A4 1944 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 NDUFA4O00483 81 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 HIGD2BQ4VC39 106 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 RNF5Q99942 180 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 FGF23Q9GZV9 251 aaPredicted RBP9.84□□□□□ -0.83
USP38-201ENST00000307017 SLC25A29Q8N8R3 303 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 Q8NFD4 153 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
USP38-201ENST00000307017 TRBV12-3P01733 135 aa9.83□□□□□ -0.84
USP38-201ENST00000307017 E7EUB6 86 aa9.83□□□□□ -0.84
USP38-201ENST00000307017 APOC4P55056 127 aa9.83□□□□□ -0.84
USP38-201ENST00000307017 PCNX2A6NKB5 2137 aa9.83□□□□□ -0.84
USP38-201ENST00000307017 SIRPDQ9H106 197 aa9.83□□□□□ -0.84
USP38-201ENST00000307017 LECT2O14960 151 aa9.83□□□□□ -0.84
USP38-201ENST00000307017 SDIM1Q6ZPB5 146 aa9.83□□□□□ -0.84
USP38-201ENST00000307017 CMC4P56277 68 aaPredicted RBP9.83□□□□□ -0.84
USP38-201ENST00000307017 TM2D2Q9BX73 214 aa9.83□□□□□ -0.84
USP38-201ENST00000307017 PCDH15Q96QU1 1955 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 CRYGBP07316 175 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 RMI2Q96E14 147 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 SRSF2Q01130 221 aaKnown RBP9.82□□□□□ -0.84
USP38-201ENST00000307017 VSIG2Q96IQ7 327 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 LOXL1Q08397 574 aaPredicted RBP9.82□□□□□ -0.84
USP38-201ENST00000307017 C2orf16Q68DN1 1984 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 FOXI2Q6ZQN5 318 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 PKIGQ9Y2B9 76 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 PLXNA2O75051 1894 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 SHANK1Q9Y566 2161 aa9.82□□□□□ -0.84
USP38-201ENST00000307017 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms