RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ORMDL3Q8N138 153 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 AGRNO00468 2067 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 TRAV12-2A0A075B6T6 113 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 D6R8Y8 96 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 SAP30O75446 220 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 LINC00310P59036 64 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 NIT1Q86X76 327 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 FAM19A2Q8N3H0 131 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 ODF3Q96PU9 254 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 SPAG8Q99932 426 aaPredicted RBP10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 TMEM191AQ9H0A3 160 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 OTOGQ6ZRI0 2925 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 KLLNB2CW77 178 aa10.82□□□□□ -0.68
SHCBP1-201ENST00000303383 M0R381 172 aa10.82□□□□□ -0.68
SHCBP1-201ENST00000303383 GATD1Q8NB37 220 aa10.82□□□□□ -0.68
SHCBP1-201ENST00000303383 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
SHCBP1-201ENST00000303383 PRELID3AQ96N28 172 aa10.82□□□□□ -0.68
SHCBP1-201ENST00000303383 OR5AL1P0C617 328 aa10.82□□□□□ -0.68
SHCBP1-201ENST00000303383 CNFNQ9BYD5 112 aa10.82□□□□□ -0.68
SHCBP1-201ENST00000303383 M0R143 59 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 PF4P02776 101 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 CD7P09564 240 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 MRPL51Q4U2R6 128 aaKnown RBP10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 GNRH2O43555 120 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 JOSD1Q15040 202 aaPredicted RBP10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 APRG1Q8IVJ8 170 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 SETXQ7Z333 2677 aaKnown RBP10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 TRAV25A0A0B4J276 109 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 FXYD7P58549 80 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 KRTDAPP60985 99 aa10.81□□□□□ -0.68
SHCBP1-201ENST00000303383 LOC389332A0A1B0GUA5 103 aa10.8□□□□□ -0.68
SHCBP1-201ENST00000303383 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
SHCBP1-201ENST00000303383 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
SHCBP1-201ENST00000303383 C2CD3Q4AC94 2353 aa10.8□□□□□ -0.68
SHCBP1-201ENST00000303383 CRLF1O75462 422 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 MAP6D1Q9H9H5 199 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 FN1P02751 2386 aaKnown RBP10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 SNAI2O43623 268 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 NCR2O95944 276 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 EVI2AP22794 236 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 DNLZQ5SXM8 178 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 CHCHD1Q96BP2 118 aaKnown RBP10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 SMKR1H3BMG3 65 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 HIVEP1P15822 2718 aa10.79□□□□□ -0.68
SHCBP1-201ENST00000303383 PTTG1IPP53801 180 aa10.78□□□□□ -0.68
SHCBP1-201ENST00000303383 ANK3Q12955 4377 aaKnown RBP10.78□□□□□ -0.68
SHCBP1-201ENST00000303383 HTN1P15515 57 aa10.78□□□□□ -0.68
SHCBP1-201ENST00000303383 NDUFA11Q86Y39 141 aa10.78□□□□□ -0.68
SHCBP1-201ENST00000303383 NSD1Q96L73 2696 aaPredicted RBP10.78□□□□□ -0.68
SHCBP1-201ENST00000303383 K7EP13 123 aa10.78□□□□□ -0.68
SHCBP1-201ENST00000303383 SPRY2O43597 315 aa10.78□□□□□ -0.68
SHCBP1-201ENST00000303383 AP5S1Q9NUS5 200 aa10.78□□□□□ -0.68
SHCBP1-201ENST00000303383 OR11H12B2RN74 326 aa10.77□□□□□ -0.68
SHCBP1-201ENST00000303383 H3BMM0 161 aa10.77□□□□□ -0.68
SHCBP1-201ENST00000303383 Q6ZWC4 215 aa10.77□□□□□ -0.68
SHCBP1-201ENST00000303383 SIGLEC8Q9NYZ4 499 aa10.77□□□□□ -0.69
SHCBP1-201ENST00000303383 SMIM17P0DL12 118 aa10.77□□□□□ -0.69
SHCBP1-201ENST00000303383 MED14OSP0DP75 135 aa10.77□□□□□ -0.69
SHCBP1-201ENST00000303383 STHQ8IWL8 128 aa10.77□□□□□ -0.69
SHCBP1-201ENST00000303383 F8P00451 2351 aa10.76□□□□□ -0.69
SHCBP1-201ENST00000303383 IGHV1OR15-1A0A075B7D0 117 aa10.76□□□□□ -0.69
SHCBP1-201ENST00000303383 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
SHCBP1-201ENST00000303383 MAP1LC3AQ9H492 121 aa10.76□□□□□ -0.69
SHCBP1-201ENST00000303383 JMJD1CQ15652 2540 aa10.76□□□□□ -0.69
SHCBP1-201ENST00000303383 MGPP08493 103 aa10.75□□□□□ -0.69
SHCBP1-201ENST00000303383 ZNF664Q8N3J9 261 aa10.75□□□□□ -0.69
SHCBP1-201ENST00000303383 AP1S3Q96PC3 154 aa10.75□□□□□ -0.69
SHCBP1-201ENST00000303383 IGHV4-4A0A075B6R2 117 aa10.75□□□□□ -0.69
SHCBP1-201ENST00000303383 NPYP01303 97 aa10.75□□□□□ -0.69
SHCBP1-201ENST00000303383 IFI27P40305 119 aaPredicted RBP10.75□□□□□ -0.69
SHCBP1-201ENST00000303383 ZNF256Q9Y2P7 627 aaPredicted RBP10.75□□□□□ -0.69
SHCBP1-201ENST00000303383 RNASE3P12724 160 aaKnown RBP10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 AMTNQ6UX39 209 aa10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 RNF185Q96GF1 192 aa10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 U3KQK5 164 aa10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 LEPROTL1O95214 131 aa10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 TRGV11A0A075B6L2 103 aa10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 SYT8Q8NBV8 401 aa10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 LAMTOR2Q9Y2Q5 125 aa10.74□□□□□ -0.69
SHCBP1-201ENST00000303383 ADARB2-AS1A8MUL3 147 aa10.73□□□□□ -0.69
SHCBP1-201ENST00000303383 Q8N1Y9 231 aa10.73□□□□□ -0.69
SHCBP1-201ENST00000303383 URB1-AS1Q96HZ7 61 aa10.73□□□□□ -0.69
SHCBP1-201ENST00000303383 IGHV1-24A0A0C4DH33 117 aa10.73□□□□□ -0.69
SHCBP1-201ENST00000303383 TDRG1Q3Y452 100 aa10.73□□□□□ -0.69
SHCBP1-201ENST00000303383 CUBNO60494 3623 aa10.73□□□□□ -0.69
SHCBP1-201ENST00000303383 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
SHCBP1-201ENST00000303383 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
SHCBP1-201ENST00000303383 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
SHCBP1-201ENST00000303383 C20orf202A1L168 122 aa10.72□□□□□ -0.69
SHCBP1-201ENST00000303383 TRAV26-2A0A0B4J265 109 aa10.72□□□□□ -0.69
SHCBP1-201ENST00000303383 C3orf79P0CE67 100 aa10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 KRTAP10-3P60369 221 aa10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 LINC01587Q99440 93 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms