RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 DEFB136Q30KP8 78 aa16.36■□□□□ 0.21
LETM1-201ENST00000302787 C16orf54Q6UWD8 224 aa16.36■□□□□ 0.21
LETM1-201ENST00000302787 NKAPP1Q8N9T2 125 aa16.36■□□□□ 0.21
LETM1-201ENST00000302787 A0A1W2PNU3 283 aaPredicted RBP16.35■□□□□ 0.21
LETM1-201ENST00000302787 Q8N9W7 124 aa16.35■□□□□ 0.21
LETM1-201ENST00000302787 SPRY4Q9C004 299 aa16.35■□□□□ 0.21
LETM1-201ENST00000302787 E7EUB6 86 aa16.35■□□□□ 0.21
LETM1-201ENST00000302787 UBL5Q9BZL1 73 aa16.35■□□□□ 0.21
LETM1-201ENST00000302787 CRLF1O75462 422 aa16.34■□□□□ 0.21
LETM1-201ENST00000302787 ANGP03950 147 aaKnown RBP16.34■□□□□ 0.21
LETM1-201ENST00000302787 CLPSL2Q6UWE3 100 aa16.34■□□□□ 0.21
LETM1-201ENST00000302787 NTN5Q8WTR8 489 aaPredicted RBP16.34■□□□□ 0.21
LETM1-201ENST00000302787 MRPL36Q9P0J6 103 aaKnown RBP16.34■□□□□ 0.21
LETM1-201ENST00000302787 MED13Q9UHV7 2174 aa16.34■□□□□ 0.21
LETM1-201ENST00000302787 PRAC2D3DTV9 90 aa16.33■□□□□ 0.21
LETM1-201ENST00000302787 BLCAPP62952 87 aa16.33■□□□□ 0.21
LETM1-201ENST00000302787 Q9H8V8 135 aa16.33■□□□□ 0.21
LETM1-201ENST00000302787 IFITM1P13164 125 aa16.33■□□□□ 0.2
LETM1-201ENST00000302787 IGLV1-47P01700 117 aa16.33■□□□□ 0.2
LETM1-201ENST00000302787 CRYGCP07315 174 aa16.32■□□□□ 0.2
LETM1-201ENST00000302787 ZFP2Q6ZN57 461 aa16.32■□□□□ 0.2
LETM1-201ENST00000302787 SLURP1P55000 103 aa16.32■□□□□ 0.2
LETM1-201ENST00000302787 APRG1Q8IVJ8 170 aa16.32■□□□□ 0.2
LETM1-201ENST00000302787 C5orf56Q8N8D9 126 aa16.32■□□□□ 0.2
LETM1-201ENST00000302787 IGLL5B9A064 214 aa16.31■□□□□ 0.2
LETM1-201ENST00000302787 IGHV4-30-2A0A087WSY4 118 aa16.31■□□□□ 0.2
LETM1-201ENST00000302787 FRMD6-AS1P0C7T7 363 aa16.31■□□□□ 0.2
LETM1-201ENST00000302787 MSMPQ1L6U9 139 aa16.31■□□□□ 0.2
LETM1-201ENST00000302787 CREBBPQ92793 2442 aa16.31■□□□□ 0.2
LETM1-201ENST00000302787 NCKAP5O14513 1909 aa16.31■□□□□ 0.2
LETM1-201ENST00000302787 NOTCH3Q9UM47 2321 aa16.3■□□□□ 0.2
LETM1-201ENST00000302787 CCL24O00175 119 aa16.3■□□□□ 0.2
LETM1-201ENST00000302787 HAMPP81172 84 aa16.3■□□□□ 0.2
LETM1-201ENST00000302787 Q8N7P7 452 aa16.3■□□□□ 0.2
LETM1-201ENST00000302787 XCL1P47992 114 aa16.29■□□□□ 0.2
LETM1-201ENST00000302787 Q71RC1 249 aaPredicted RBP16.29■□□□□ 0.2
LETM1-201ENST00000302787 SLC25A29Q8N8R3 303 aa16.29■□□□□ 0.2
LETM1-201ENST00000302787 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■■■□ 21.4
LETM1-201ENST00000302787 C9orf47Q6ZRZ4 202 aa16.28■□□□□ 0.2
LETM1-201ENST00000302787 PRSS47A8MTI9 375 aa16.28■□□□□ 0.2
LETM1-201ENST00000302787 P0C879 139 aa16.28■□□□□ 0.2
LETM1-201ENST00000302787 ADORA2A-AS1P86434 159 aa16.28■□□□□ 0.2
LETM1-201ENST00000302787 SPANXDQ9BXN6 97 aa16.28■□□□□ 0.2
LETM1-201ENST00000302787 ZGRF1Q86YA3 2104 aa16.28■□□□□ 0.2
LETM1-201ENST00000302787 TRAV25A0A0B4J276 109 aa16.27■□□□□ 0.2
LETM1-201ENST00000302787 TMEM126AQ9H061 195 aa16.27■□□□□ 0.2
LETM1-201ENST00000302787 WISP2O76076 250 aa16.27■□□□□ 0.19
LETM1-201ENST00000302787 TINCRA0A1B0GVN0 87 aa16.27■□□□□ 0.19
LETM1-201ENST00000302787 RBMY1FQ15415 496 aaKnown RBP16.27■□□□□ 0.19
LETM1-201ENST00000302787 DSCR8Q96T75 97 aa16.27■□□□□ 0.19
LETM1-201ENST00000302787 A0A0J9YXV3 536 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 IGHG4P01861 327 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 A0A0J9YY99 117 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 ZFP36P26651 326 aaKnown RBP16.26■□□□□ 0.19
LETM1-201ENST00000302787 HERV-K104P63124 156 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 RNF152Q8N8N0 203 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 TRBV6-1A0A0K0K1D8 114 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 CTRLP40313 264 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 ANKRD29Q8N6D5 301 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 C15orf53Q8NAA6 179 aa16.26■□□□□ 0.19
LETM1-201ENST00000302787 ZNF106Q9H2Y7 1883 aaKnown RBP16.26■□□□□ 0.19
LETM1-201ENST00000302787 RPL32P62910 135 aaKnown RBP16.25■□□□□ 0.19
LETM1-201ENST00000302787 Q6ZPA2 131 aa16.25■□□□□ 0.19
LETM1-201ENST00000302787 C10orf105Q8TEF2 133 aa16.25■□□□□ 0.19
LETM1-201ENST00000302787 C2orf16Q68DN1 1984 aa16.24■□□□□ 0.19
LETM1-201ENST00000302787 ZNF503Q96F45 646 aa16.24■□□□□ 0.19
LETM1-201ENST00000302787 TRAV12-1A0A0B4J245 112 aa16.24■□□□□ 0.19
LETM1-201ENST00000302787 MED13LQ71F56 2210 aa16.24■□□□□ 0.19
LETM1-201ENST00000302787 SH2D6Q7Z4S9 175 aa16.24■□□□□ 0.19
LETM1-201ENST00000302787 J3QKU1 62 aa16.24■□□□□ 0.19
LETM1-201ENST00000302787 MUSTN1Q8IVN3 82 aa16.24■□□□□ 0.19
LETM1-201ENST00000302787 C19orf71A6NCJ1 209 aa16.23■□□□□ 0.19
LETM1-201ENST00000302787 BAALC-AS2P0C853 105 aa16.23■□□□□ 0.19
LETM1-201ENST00000302787 Q6ZQT7 251 aa16.23■□□□□ 0.19
LETM1-201ENST00000302787 TTTY13Q9BZ97 58 aa16.23■□□□□ 0.19
LETM1-201ENST00000302787 FXYD2P54710 66 aa16.23■□□□□ 0.19
LETM1-201ENST00000302787 K7EQD1 137 aa16.23■□□□□ 0.19
LETM1-201ENST00000302787 RPL39P62891 51 aaKnown RBP16.22■□□□□ 0.19
LETM1-201ENST00000302787 Q8N1Y9 231 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 TEX48A0A1B0GUV7 120 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 TOMM6Q96B49 74 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 OBSL1O75147 1896 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 IGKV1D-37A0A075B6S9 117 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 PCNX2A6NKB5 2137 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 C5orf38Q86SI9 138 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 CRIP3Q6Q6R5 217 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 BAALCQ8WXS3 180 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 HIGD1BQ9P298 99 aa16.22■□□□□ 0.19
LETM1-201ENST00000302787 IGHV4OR15-8A0A075B7B6 117 aa16.21■□□□□ 0.19
LETM1-201ENST00000302787 A0A087WW49 117 aa16.21■□□□□ 0.19
LETM1-201ENST00000302787 A4D1N5 150 aa16.21■□□□□ 0.19
LETM1-201ENST00000302787 DEFB113Q30KQ7 82 aa16.21■□□□□ 0.19
LETM1-201ENST00000302787 KIAA1549LQ6ZVL6 1849 aa16.21■□□□□ 0.18
LETM1-201ENST00000302787 PLA2G5P39877 138 aa16.21■□□□□ 0.18
LETM1-201ENST00000302787 BRWD1-AS2P59051 145 aa16.21■□□□□ 0.18
LETM1-201ENST00000302787 C16orf74Q96GX8 76 aa16.2■□□□□ 0.18
LETM1-201ENST00000302787 RMI2Q96E14 147 aa16.2■□□□□ 0.18
LETM1-201ENST00000302787 K7EMT4 169 aa16.2■□□□□ 0.18
LETM1-201ENST00000302787 MED14OSP0DP75 135 aa16.2■□□□□ 0.18
LETM1-201ENST00000302787 CRYBA4P53673 196 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 398 ms