RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CFHR3Q02985 330 aa11.9□□□□□ -0.5
NCKIPSD-201ENST00000294129 PSMG4Q5JS54 123 aa11.9□□□□□ -0.5
NCKIPSD-201ENST00000294129 TRAV12-3A0A0B4J271 114 aa11.9□□□□□ -0.5
NCKIPSD-201ENST00000294129 TMEM8BA6NDV4 472 aa11.9□□□□□ -0.5
NCKIPSD-201ENST00000294129 SLC25A16P16260 332 aa11.9□□□□□ -0.5
NCKIPSD-201ENST00000294129 PSMB8P28062 276 aa11.9□□□□□ -0.5
NCKIPSD-201ENST00000294129 SYNJ2BPP57105 145 aa11.9□□□□□ -0.5
NCKIPSD-201ENST00000294129 TMEM160Q9NX00 188 aa11.9□□□□□ -0.5
NCKIPSD-201ENST00000294129 IGLV2-18A0A075B6J9 118 aa11.89□□□□□ -0.51
NCKIPSD-201ENST00000294129 TRAV12-2A0A075B6T6 113 aa11.89□□□□□ -0.51
NCKIPSD-201ENST00000294129 LAGE3Q14657 143 aa11.89□□□□□ -0.51
NCKIPSD-201ENST00000294129 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
NCKIPSD-201ENST00000294129 FGF6P10767 208 aa11.89□□□□□ -0.51
NCKIPSD-201ENST00000294129 COTL1Q14019 142 aa11.89□□□□□ -0.51
NCKIPSD-201ENST00000294129 ODF1Q14990 250 aa11.89□□□□□ -0.51
NCKIPSD-201ENST00000294129 NEGR1Q7Z3B1 354 aa11.89□□□□□ -0.51
NCKIPSD-201ENST00000294129 DSCR9P59020 149 aa11.88□□□□□ -0.51
NCKIPSD-201ENST00000294129 GTSCR1Q86UQ5 136 aa11.88□□□□□ -0.51
NCKIPSD-201ENST00000294129 GATA3P23771 443 aa11.88□□□□□ -0.51
NCKIPSD-201ENST00000294129 JPT2Q9H910 190 aa11.88□□□□□ -0.51
NCKIPSD-201ENST00000294129 ZNF469Q96JG9 3925 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-201ENST00000294129 UBR5O95071 2799 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-201ENST00000294129 IGKV2D-26A0A0A0MRZ7 120 aa11.88□□□□□ -0.51
NCKIPSD-201ENST00000294129 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
NCKIPSD-201ENST00000294129 NF1P21359 2839 aa11.87□□□□□ -0.51
NCKIPSD-201ENST00000294129 MYOZ3Q8TDC0 251 aa11.87□□□□□ -0.51
NCKIPSD-201ENST00000294129 DPF1Q92782 380 aa11.87□□□□□ -0.51
NCKIPSD-201ENST00000294129 RNASE3P12724 160 aaKnown RBP11.87□□□□□ -0.51
NCKIPSD-201ENST00000294129 RAB37Q96AX2 223 aa11.87□□□□□ -0.51
NCKIPSD-201ENST00000294129 AP1S3Q96PC3 154 aa11.87□□□□□ -0.51
NCKIPSD-201ENST00000294129 CD7P09564 240 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 ID1P41134 155 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 SEC11AP67812 179 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 SRSF1Q07955 248 aaKnown RBP eCLIP11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 DEFB136Q30KP8 78 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 FAM159AQ6UWV7 190 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 DCANP1Q8TF63 244 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 A0A087WWL8 130 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 H3BUT2 72 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 HOXA3O43365 443 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 RASL10AQ92737 203 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 DPH3P1Q9H4G8 78 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 ACANP16112 2415 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 NBPF19A0A087WUL8 3843 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 APCP25054 2843 aa11.86□□□□□ -0.51
NCKIPSD-201ENST00000294129 IGHV4-4A0A075B6R2 117 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 IGKCP01834 107 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 SAP30O75446 220 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 BRI3O95415 125 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 BOD1L2Q8IYS8 172 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 OR1N2Q8NGR9 330 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 IGHV4OR15-8A0A075B7B6 117 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 A0A087WW49 117 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 A0A096LNT2 108 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 SUMO2P61956 95 aaKnown RBP11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 FAM74A4Q5TZK3 123 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 JMJD8Q96S16 334 aa11.85□□□□□ -0.51
NCKIPSD-201ENST00000294129 CR1P17927 2039 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 F5H697 171 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 KHDC1LQ5JSQ8 128 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 MRAP2Q96G30 205 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 ITPR3Q14573 2671 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 C18orf65Q6ZTR6 163 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 FAM19A4Q96LR4 140 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 DUX3Q96PT4 197 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 VPREB3Q9UKI3 123 aa11.84□□□□□ -0.51
NCKIPSD-201ENST00000294129 MTORP42345 2549 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 CHD6Q8TD26 2715 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 HTN1P15515 57 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 SPINK13Q1W4C9 94 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 A6NDN8 102 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 LINC01546A6NGU7 62 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 ATP5LO75964 103 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 DPM2O94777 84 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 FLNAP21333 2647 aaKnown RBP11.83□□□□□ -0.52
NCKIPSD-201ENST00000294129 K7EMT4 169 aa11.82□□□□□ -0.52
NCKIPSD-201ENST00000294129 K7ERU9 68 aa11.82□□□□□ -0.52
NCKIPSD-201ENST00000294129 ZNF843Q8N446 348 aa11.82□□□□□ -0.52
NCKIPSD-201ENST00000294129 C9orf118A6NHY6 69 aa11.82□□□□□ -0.52
NCKIPSD-201ENST00000294129 IGHV4-31P0DP07 118 aa11.82□□□□□ -0.52
NCKIPSD-201ENST00000294129 Q5PR19 223 aa11.82□□□□□ -0.52
NCKIPSD-201ENST00000294129 HOXD3P31249 432 aaPredicted RBP11.82□□□□□ -0.52
NCKIPSD-201ENST00000294129 SCGB3A1Q96QR1 104 aa11.82□□□□□ -0.52
NCKIPSD-201ENST00000294129 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.81□□□□□ -0.52
NCKIPSD-201ENST00000294129 SNRPD3P62318 126 aaKnown RBP11.81□□□□□ -0.52
NCKIPSD-201ENST00000294129 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
NCKIPSD-201ENST00000294129 H3BRM9 83 aa11.81□□□□□ -0.52
NCKIPSD-201ENST00000294129 K7EMI3 77 aa11.81□□□□□ -0.52
NCKIPSD-201ENST00000294129 ADAMTSL5Q6ZMM2 481 aa11.81□□□□□ -0.52
NCKIPSD-201ENST00000294129 KLLNB2CW77 178 aa11.8□□□□□ -0.52
NCKIPSD-201ENST00000294129 GTF2H5Q6ZYL4 71 aa11.8□□□□□ -0.52
NCKIPSD-201ENST00000294129 MDFICQ9P1T7 246 aa11.8□□□□□ -0.52
NCKIPSD-201ENST00000294129 GCSHP23434 173 aa11.8□□□□□ -0.52
NCKIPSD-201ENST00000294129 SLURP1P55000 103 aa11.8□□□□□ -0.52
NCKIPSD-201ENST00000294129 HSD52Q0P140 79 aa11.8□□□□□ -0.52
NCKIPSD-201ENST00000294129 ZNF702PQ9H963 129 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 1670 ms