RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RNASE3P12724 160 aaKnown RBP4.58□□□□□ -1.68
CD44-204ENST00000279452 CCL18P55774 89 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 ZNF506Q5JVG8 444 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 FAM74A4Q5TZK3 123 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 RASL10AQ92737 203 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 C9orf85Q96MD7 179 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 C18orf15Q96N68 181 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 PARLQ9H300 379 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 BIN3Q9NQY0 253 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 PRO0255Q9UI72 69 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 HHLA3Q9XRX5 114 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 ICOSQ9Y6W8 199 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 MUC21A0A0G2JKD1 596 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 MUC21A0A140T8X8 626 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 P01737 135 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 SRIP30626 198 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 RAB14P61106 215 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 SLAQ13239 276 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 FHL2Q14192 279 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 COX8CQ7Z4L0 72 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 ZFP82Q8N141 532 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 POM121L12Q8N7R1 296 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 OR2D3Q8NGH3 330 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 FAM210AQ96ND0 272 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 MLST8Q9BVC4 326 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 IL36BQ9NZH7 164 aa4.57□□□□□ -1.68
CD44-204ENST00000279452 TRBV20OR9-2A0A075B6H5 130 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 XKRY2A2RUG3 117 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 ZNF727A8MUV8 499 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 A8MWV9 139 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 TMEM250H0YL14 139 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 M0R2N4 97 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 RS1O15537 224 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 GZMBP10144 247 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 GYPEP15421 78 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 CRYBA4P53673 196 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 SPANXN1Q5VSR9 72 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 CFAP126Q5VTH2 177 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 LYPD6BQ8NI32 183 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 SMIM12Q96EX1 92 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 VSIG2Q96IQ7 327 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 SMIM7Q9BQ49 75 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 PRADC1Q9BSG0 188 aa4.56□□□□□ -1.68
CD44-204ENST00000279452 A0A087WWL8 130 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 LOC100131303A0A0U1RQF7 123 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 H3BNG1 76 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 IGLV2-8P01709 118 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 RPS20P60866 119 aaKnown RBP4.55□□□□□ -1.68
CD44-204ENST00000279452 PEA15Q15121 130 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 RHOHQ15669 191 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 ZNF56Q15929 161 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 MRPL23Q16540 153 aaKnown RBP4.55□□□□□ -1.68
CD44-204ENST00000279452 RNF212Q495C1 297 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 FER1L6-AS1Q8NA97 138 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 OR10AG1Q8NH19 301 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 RNASE7Q9H1E1 156 aaKnown RBP4.55□□□□□ -1.68
CD44-204ENST00000279452 RPP21Q9H633 154 aaKnown RBP4.55□□□□□ -1.68
CD44-204ENST00000279452 JPT2Q9H910 190 aa4.55□□□□□ -1.68
CD44-204ENST00000279452 F5H697 171 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 K7EN84 100 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 K7EQD1 137 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 RHODO00212 210 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 GATCO43716 136 aaKnown RBP4.54□□□□□ -1.68
CD44-204ENST00000279452 CIDEAO60543 219 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 MGPP08493 103 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 SRP19P09132 144 aaKnown RBP4.54□□□□□ -1.68
CD44-204ENST00000279452 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 MED14OSP0DP75 135 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 GATA1P15976 413 aaPredicted RBP4.54□□□□□ -1.68
CD44-204ENST00000279452 ERVFC1-1P60608 527 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 DNLZQ5SXM8 178 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 SLC25A29Q8N8R3 303 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 NUDT10Q8NFP7 164 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 OCC1Q8TAD7 63 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 NUDT11Q96G61 164 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 AP1S3Q96PC3 154 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 SAMD10Q9BYL1 202 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 LINC00588Q9Y4M8 146 aa4.54□□□□□ -1.68
CD44-204ENST00000279452 TRBV6-4A0A1B0GX49 114 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 C19orf71A6NCJ1 209 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 GAGE12JA6NER3 117 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 CXCL1P09341 107 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 OR5AL1P0C617 328 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
CD44-204ENST00000279452 SRSF3P84103 164 aaKnown RBP4.53□□□□□ -1.68
CD44-204ENST00000279452 GAGE1Q13065 139 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 GAGE4Q13068 117 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 GAGE5Q13069 117 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 ADIRFQ15847 76 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 ESRGQ1W209 222 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 GAGE13Q4V321 117 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 ZFP2Q6ZN57 461 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 C14orf178Q8N769 122 aaPredicted RBP4.53□□□□□ -1.68
CD44-204ENST00000279452 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 PTH2Q96A98 100 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 BORCS7Q96B45 105 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 SFRP2Q96HF1 295 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 SCRT2Q9NQ03 307 aa4.53□□□□□ -1.68
CD44-204ENST00000279452 MRPS16Q9Y3D3 137 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms