RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
TMEM47-201ENST00000275954 PCSK5Q92824 1860 aa11.11□□□□□ -0.63
TMEM47-201ENST00000275954 NDUFA4O00483 81 aa11.11□□□□□ -0.63
TMEM47-201ENST00000275954 UBE2L6O14933 153 aa11.11□□□□□ -0.63
TMEM47-201ENST00000275954 CRXO43186 299 aaPredicted RBP11.11□□□□□ -0.63
TMEM47-201ENST00000275954 TRBV12-3P01733 135 aa11.11□□□□□ -0.63
TMEM47-201ENST00000275954 LMO4P61968 165 aa11.1□□□□□ -0.63
TMEM47-201ENST00000275954 LURAP1LQ8IV03 231 aa11.1□□□□□ -0.63
TMEM47-201ENST00000275954 SIRPDQ9H106 197 aa11.1□□□□□ -0.63
TMEM47-201ENST00000275954 C19orf54Q5BKX5 351 aa11.1□□□□□ -0.63
TMEM47-201ENST00000275954 ZNF747Q9BV97 191 aa11.1□□□□□ -0.63
TMEM47-201ENST00000275954 KIR2DL5BA0A0G2JN68 375 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 KIR2DL5BA0A0G2JPC4 375 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 HSD52Q0P140 79 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 KIR2DL5AQ8N109 375 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 C3orf56Q8N813 242 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 SPOCK3Q9BQ16 436 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 CIDEAO60543 219 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 MRPS16Q9Y3D3 137 aaKnown RBP11.09□□□□□ -0.63
TMEM47-201ENST00000275954 COTL1Q14019 142 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 TCTEX1D4Q5JR98 221 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 C5orf56Q8N8D9 126 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 LY6G5BQ8NDX9 201 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 WI2-2373I1.2A0A1W2PRP0 233 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 AJUBAQ96IF1 538 aa11.09□□□□□ -0.63
TMEM47-201ENST00000275954 PHLDA1Q8WV24 401 aaPredicted RBP11.08□□□□□ -0.64
TMEM47-201ENST00000275954 MEGF9Q9H1U4 602 aa11.08□□□□□ -0.64
TMEM47-201ENST00000275954 TOMM7Q9P0U1 55 aa11.08□□□□□ -0.64
TMEM47-201ENST00000275954 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
TMEM47-201ENST00000275954 INAFM1C9JVW0 142 aa11.08□□□□□ -0.64
TMEM47-201ENST00000275954 C2orf66Q6UXQ4 117 aa11.08□□□□□ -0.64
TMEM47-201ENST00000275954 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
TMEM47-201ENST00000275954 TP53TG3Q9ULZ0 132 aa11.08□□□□□ -0.64
TMEM47-201ENST00000275954 CD28P10747 220 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 KIR3DS1Q14943 382 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 A0A1B0GWB2 263 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 TMEM262E9PQX1 116 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 ZNF80P51504 273 aaPredicted RBP11.07□□□□□ -0.64
TMEM47-201ENST00000275954 SEC11AP67812 179 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 KLF5Q13887 457 aaPredicted RBP11.07□□□□□ -0.64
TMEM47-201ENST00000275954 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 ZFHX4Q86UP3 3567 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 TET2Q6N021 2002 aaPredicted RBP11.07□□□□□ -0.64
TMEM47-201ENST00000275954 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 IGHV7-4-1A0A0J9YVY3 117 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 C19orf71A6NCJ1 209 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 SAP30O75446 220 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 CRYGBP07316 175 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
TMEM47-201ENST00000275954 TMEM190Q8WZ59 177 aa11.07□□□□□ -0.64
TMEM47-201ENST00000275954 TRAV2A0A0B4J234 112 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 COX11Q9Y6N1 276 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 RPL35AP18077 110 aaKnown RBP11.06□□□□□ -0.64
TMEM47-201ENST00000275954 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 TTTY13Q9BZ97 58 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 TRGV1A0A0A0MS02 117 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 VCYO14598 125 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 TEX29Q8N6K0 151 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 NOTCH1P46531 2555 aa11.06□□□□□ -0.64
TMEM47-201ENST00000275954 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 SMPXQ9UHP9 88 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 SMG1Q96Q15 3661 aaKnown RBP11.05□□□□□ -0.64
TMEM47-201ENST00000275954 LOXL1Q08397 574 aaPredicted RBP11.05□□□□□ -0.64
TMEM47-201ENST00000275954 UBE2V1Q13404 147 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 SAMD5Q5TGI4 173 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 NPC2P61916 151 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 DEFB121Q5J5C9 76 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 Q8N8P6 123 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 ZNF479Q96JC4 524 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 TP53TG1Q9Y2A0 90 aa11.05□□□□□ -0.64
TMEM47-201ENST00000275954 ODF3BA8MYP8 253 aa11.04□□□□□ -0.64
TMEM47-201ENST00000275954 TNRC6BQ9UPQ9 1833 aaKnown RBP11.04□□□□□ -0.64
TMEM47-201ENST00000275954 HTN3P15516 51 aa11.04□□□□□ -0.64
TMEM47-201ENST00000275954 GATA3P23771 443 aa11.04□□□□□ -0.64
TMEM47-201ENST00000275954 SDHAF1A6NFY7 115 aa11.04□□□□□ -0.64
TMEM47-201ENST00000275954 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
TMEM47-201ENST00000275954 LY6LH3BQJ8 138 aa11.04□□□□□ -0.64
TMEM47-201ENST00000275954 CHAC1Q9BUX1 264 aa11.04□□□□□ -0.64
TMEM47-201ENST00000275954 ASH1LQ9NR48 2969 aaKnown RBP11.03□□□□□ -0.64
TMEM47-201ENST00000275954 CCDC140Q96MF4 163 aa11.03□□□□□ -0.64
TMEM47-201ENST00000275954 MTURNQ8N3F0 131 aa11.03□□□□□ -0.64
TMEM47-201ENST00000275954 MBD6Q96DN6 1003 aa11.03□□□□□ -0.64
TMEM47-201ENST00000275954 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
TMEM47-201ENST00000275954 SMIM2Q9BVW6 85 aa11.03□□□□□ -0.64
TMEM47-201ENST00000275954 RNF114Q9Y508 228 aa11.03□□□□□ -0.64
TMEM47-201ENST00000275954 ZANQ9Y493 2812 aa11.03□□□□□ -0.64
TMEM47-201ENST00000275954 COX8AP10176 69 aa11.02□□□□□ -0.64
TMEM47-201ENST00000275954 COX6CP09669 75 aa11.02□□□□□ -0.65
TMEM47-201ENST00000275954 PLNP26678 52 aa11.01□□□□□ -0.65
TMEM47-201ENST00000275954 CDKN1BP46527 198 aa11.01□□□□□ -0.65
TMEM47-201ENST00000275954 LGALS9BQ3B8N2 356 aa11.01□□□□□ -0.65
TMEM47-201ENST00000275954 LGALS9CQ6DKI2 356 aa11.01□□□□□ -0.65
TMEM47-201ENST00000275954 SPXQ9BT56 116 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms